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  • 1
    Publication Date: 2017-01-22
    Description: The ocean's biological carbon pump plays a central role in regulating atmospheric CO2 levels. In particular, the depth at which sinking organic carbon is broken down and respired in the mesopelagic zone is critical, with deeper remineralization resulting in greater carbon storage. Until recently, however, a balanced budget of the supply and consumption of organic carbon in the mesopelagic had not been constructed in any region of the ocean, and the processes controlling organic carbon turnover are still poorly understood. Large-scale data syntheses suggest that a wide range of factors can influence remineralization depth including upper-ocean ecological interactions, and interior dissolved oxygen concentration and temperature. However, these analyses do not provide a mechanistic understanding of remineralization, which increases the challenge of appropriately modeling the mesopelagic carbon dynamics. In light of this, the UK Natural Environment Research Council has funded a programme with this mechanistic understanding as its aim, drawing targeted fieldwork right through to implementation of a new parameterization for mesopelagic remineralization within an IPCC class global biogeochemical model. The Controls over Ocean Mesopelagic Interior Carbon Storage (COMICS) programme will deliver new insights into the processes of carbon cycling in the mesopelagic zone and how these influence ocean carbon storage. Here we outline the programme's rationale, its goals, planned fieldwork, and modeling activities, with the aim of stimulating international collaboration.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , peerRev
    Format: application/pdf
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  • 2
    Publication Date: 2022-05-25
    Description: © The Author(s), 2015. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Deep Sea Research Part I: Oceanographic Research Papers 100 (2015): 21-33, doi:10.1016/j.dsr.2015.01.010.
    Description: Most of our knowledge about deep-sea habitats is limited to bathyal (200–3000 m) and abyssal depths (3000–6000 m), while relatively little is known about the hadal zone (6000–11,000 m). The basic paradigm for the distribution of deep seafloor biomass suggests that the reduction in biomass and average body size of benthic animals along depth gradients is mainly related to surface productivity and remineralisation of sinking particulate organic carbon with depth. However, there is evidence that this pattern is somewhat reversed in hadal trenches by the funnelling of organic sediments, which would result in increased food availability along the axis of the trenches and towards their deeper regions. Therefore, despite the extreme hydrostatic pressure and remoteness from the pelagic food supply, it is hypothesized that biomass can increase with depth in hadal trenches. We developed a numerical model of gravitational lateral sediment transport along the seafloor as a function of slope, using the Kermadec Trench, near New Zealand, as a test environment. We propose that local topography (at a scale of tens of kilometres) and trench shape can be used to provide useful estimates of local accumulation of food and, therefore, patterns of benthic biomass. Orientation and steepness of local slopes are the drivers of organic sediment accumulation in the model, which result in higher biomass along the axis of the trench, especially in the deepest spots, and lower biomass on the slopes, from which most sediment is removed. The model outputs for the Kermadec Trench are in agreement with observations suggesting the occurrence of a funnelling effect and substantial spatial variability in biomass inside a trench. Further trench surveys will be needed to determine the degree to which seafloor currents are important compared with the gravity-driven transport modelled here. These outputs can also benefit future hadal investigations by highlighting areas of potential biological interest, on which to focus sampling effort. Comprehensive exploration of hadal trenches will, in turn, provide datasets for improving the model parameters and increasing predictive power.
    Description: MCI would also like to thank the University of Southampton, the Natural Environment Research Council (NERC, grant number NEW332003) and the Institute of Marine Engineering, Science & Technology (IMarEST), for supporting his research towards a PhD. We are grateful for the support provided by the National Science Foundation (OCE-1131620 to TMS, JCD, and PHY) to the Hadal Ecosystem Studies (HADES) project to which this paper forms a contribution. Support also came from the Natural Environment Research Council (NERC) and its Marine Environmental Mapping Programme (MAREMAP).
    Keywords: Hadal ecology ; Sediment ; Gravitational transport ; Topography ; Benthic biomass ; Kermadec Trench
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: application/pdf
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  • 3
    Publication Date: 2022-11-10
    Description: © The Author(s), 2019. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in [citation], doi:[doi]. Gommenginger, C., Chapron, B., Hogg, A., Buckingham, C., Fox-Kemper, B., Eriksson, L., Soulat, F., Ubelmann, C., Ocampo-Torres, F., Nardelli, B. B., Griffin, D., Lopez-Dekker, P., Knudsen, P., Andersen, O., Stenseng, L., Stapleton, N., Perrie, W., Violante-Carvalho, N., Schulz-Stellenfleth, J., Woolf, D., Isern-Fontanet, J., Ardhuin, F., Klein, P., Mouche, A., Pascual, A., Capet, X., Hauser, D., Stoffelen, A., Morrow, R., Aouf, L., Breivik, O., Fu, L., Johannessen, J. A., Aksenov, Y., Bricheno, L., Hirschi, J., Martin, A. C. H., Martin, A. P., Nurser, G., Polton, J., Wolf, J., Johnsens, H., Soloviev, A., Jacobs, G. A., Collard, F., Groom, S., Kudryavtsev, V., Wilkin, J., Navarro, V., Babanin, A., Martin, M., Siddorn, J., Saulter, A., Rippeth, T., Emery, B., Maximenko, N., Romeiser, R., Graber, H., Azcarate, A. A., Hughes, C. W., Vandemark, D., da Silva, J., Van Leeuwen, P. J., Naveira-Garabato, A., Gemmrich, J., Mahadevan, A., Marquez, J., Munro, Y., Doody, S., & Burbidge, G. SEASTAR: A mission to study ocean submesoscale dynamics and small-scale atmosphere-ocean processes in coastal, shelf and polar seas. Frontiers in Marine Science, 6, (2019):457, doi:10.3389/fmars.2019.00457.
    Description: High-resolution satellite images of ocean color and sea surface temperature reveal an abundance of ocean fronts, vortices and filaments at scales below 10 km but measurements of ocean surface dynamics at these scales are rare. There is increasing recognition of the role played by small scale ocean processes in ocean-atmosphere coupling, upper-ocean mixing and ocean vertical transports, with advanced numerical models and in situ observations highlighting fundamental changes in dynamics when scales reach 1 km. Numerous scientific publications highlight the global impact of small oceanic scales on marine ecosystems, operational forecasts and long-term climate projections through strong ageostrophic circulations, large vertical ocean velocities and mixed layer re-stratification. Small-scale processes particularly dominate in coastal, shelf and polar seas where they mediate important exchanges between land, ocean, atmosphere and the cryosphere, e.g., freshwater, pollutants. As numerical models continue to evolve toward finer spatial resolution and increasingly complex coupled atmosphere-wave-ice-ocean systems, modern observing capability lags behind, unable to deliver the high-resolution synoptic measurements of total currents, wind vectors and waves needed to advance understanding, develop better parameterizations and improve model validations, forecasts and projections. SEASTAR is a satellite mission concept that proposes to directly address this critical observational gap with synoptic two-dimensional imaging of total ocean surface current vectors and wind vectors at 1 km resolution and coincident directional wave spectra. Based on major recent advances in squinted along-track Synthetic Aperture Radar interferometry, SEASTAR is an innovative, mature concept with unique demonstrated capabilities, seeking to proceed toward spaceborne implementation within Europe and beyond.
    Description: CG and AM received funding from the United Kingdom Centre for Earth Observation Instrumentation SEASTAR+ project (Contract No. RP10G0435A02). PVL was supported by the European Research Council (ERC) CUNDA project 694509 under the European Union Horizon 2020 Research and Innovation Program.
    Keywords: Satellite ; Air sea interactions ; Upper ocean dynamics ; Submesoscale ; Coastal ; Marginal ice zone ; Radar ; Along-track interferometry
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 4
    Publication Date: 2019
    Description: Abstract High soil carbonate limits crop performance especially in semiarid or arid climates. To understand how plants adapt to such soils, we explored natural variation in tolerance to soil carbonate in small local populations (demes) of Arabidopsis thaliana growing on soils differing in carbonate content. Reciprocal field‐based transplants on soils with elevated carbonate (+C) and without carbonate (−C) over several years revealed that demes native to (+C) soils showed higher fitness than those native to (−C) soils when both were grown together on carbonate‐rich soil. This supports the role of soil carbonate as a driving factor for local adaptation. Analyses of contrasting demes revealed key mechanisms associated with these fitness differences. Under controlled conditions, plants from the tolerant deme A1(+C) native to (+C) soil were more resistant to both elevated carbonate and iron deficiency than plants from the sensitive T6(−C) deme native to (−C) soil. Resistance of A1(+C) to elevated carbonate was associated with higher root extrusion of both protons and coumarin‐type phenolics. Tolerant A1(+C) also had better Ca‐exclusion than sensitive T6(−C). We conclude that Arabidopsis demes are locally adapted in their native habitat to soils with moderately elevated carbonate. This adaptation is associated with both enhanced iron acquisition and calcium exclusion.
    Print ISSN: 0140-7791
    Electronic ISSN: 1365-3040
    Topics: Biology
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  • 5
    Publication Date: 2017-12-01
    Print ISSN: 0031-3203
    Electronic ISSN: 1873-5142
    Topics: Computer Science
    Published by Elsevier
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  • 6
    Publication Date: 2016-12-31
    Description: Invasive plants can alter ecosystem properties, leading to changes in the ecosystem services on which humans depend. However, generalizing about these effects is difficult because invasive plants represent a wide range of life forms, and invaded ecosystems differ in their plant communities and abiotic conditions. We hypothesize that differences in traits between the invader and native species can be used to predict impacts and so aid generalization. We further hypothesize that environmental conditions at invaded sites modify the effect of trait differences and so combine with traits to predict invasion impacts. To test these hypotheses, we used systematic review to compile data on changes in aboveground and soil carbon pools following non-native plant invasion from studies across the World. Maximum potential height ( H max ) of each species was drawn from trait databases and other sources. We used meta-regression to assess which of invasive species’ H max , differences in this height trait between native and invasive plants, and climatic water deficit, a measure of water stress, were good predictors of changes in carbon pools following invasion. We found that aboveground biomass in invaded ecosystems relative to uninvaded ones increased as the value of H max of invasive relative to native species increased, but that this effect was reduced in more water stressed ecosystems. Changes in soil carbon pools were also positively correlated with the relative H max of invasive species, but were not altered by water stress. This study is one of the first to show quantitatively that the impact of invasive species on an ecosystem may depend on differences in invasive and native species’ traits, rather than solely the traits of invasive species. Our study is also the first to show that the influence of trait differences can be altered by climate. Further developing our understanding of the impacts of invasive species using this framework could help researchers to identify not only potentially dangerous invasive species, but also the ecosystems where impacts are likely to be greatest. This article is protected by copyright. All rights reserved.
    Print ISSN: 0012-9658
    Electronic ISSN: 1939-9170
    Topics: Biology
    Published by Wiley on behalf of The Ecological Society of America (ESA).
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  • 7
    Publication Date: 2016-03-01
    Print ISSN: 0079-6611
    Electronic ISSN: 1873-4472
    Topics: Geosciences , Physics
    Published by Elsevier
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  • 8
    Publication Date: 2015-06-01
    Print ISSN: 0079-6611
    Electronic ISSN: 1873-4472
    Topics: Geosciences , Physics
    Published by Elsevier
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  • 9
    Publication Date: 2017-10-18
    Print ISSN: 0300-7839
    Electronic ISSN: 1572-9915
    Topics: Biology , Energy, Environment Protection, Nuclear Power Engineering , Ethnic Sciences
    Published by Springer
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  • 10
    Publication Date: 2019-09-03
    Description: The metabolism of dietary polyphenols ellagitannins by the gut-microbiota allows the human stratification in urolithin metabotypes depending on the final urolithins produced. Metabotype-A only produces urolithin-A, metabotype-B yields urolithin-B and isourolithin-A in addition to urolithin-A, and metabotype 0 does not produce urolithins. Metabotype-A has been suggested to be ‘protective’, and metabotype-B dysbiotic-prone to cardiometabolic impairments. We analyzed the gut-microbiome of 40 healthy women and determined their metabotypes and enterotypes, and their associations with anthropometric and gut-microbial changes after 3 weeks, 4, 6, and 12 months postpartum. Metabotype-A was predominant in mothers who lost weight (≥2 kg) (75%) versus metabotype-B (54%). After delivery, the microbiota of metabotype-A mothers changed, unlike metabotype-B, which barely changed over 1 year. The metabotype-A discriminating bacteria correlated to the decrease of the women’s waist while some metabotype-B bacteria were inversely associated with a reduction of body mass index (BMI), waist, and waist-to-hip ratio. Metabotype-B was associated with a more robust and less modulating microbial and anthropometric profiles versus metabotype-A, in which these profiles were normalized through the 1-year follow-up postpartum. Consequently, urolithin metabotypes assessment could be a tool to anticipate the predisposition of women to normalize their anthropometric values and gut-microbiota, significantly altered during pregnancy and after childbirth.
    Electronic ISSN: 2072-6643
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition , Process Engineering, Biotechnology, Nutrition Technology
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