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  • *Micronuclei, Chromosome-Defective  (1)
  • 053-2; 057-1; 087-1; 162-983; 165-1002; 172-1060; 175-1078C; 175-1084; 293; 311; 3664N/S; 63F/NL; 90b; 94-609; Agadir Canyon; ALIENOR; ALTITUDE; AMADEUS; Amazon Fan; AMOCINT, IMAGES XVII; Angola Basin; ARK-X/2; Atlantic; Atlantic Ocean; Atlantic sediment cores; Azores; BC; Benguela Current, South Atlantic Ocean; Blake-Bahama Outer Ridge, North Atlantic Ocean; Box corer; CALYPSO; Calypso Corer; Calypso square corer; Calypso Square Core System; CASQ; CASQS; Cayman Rise, Caribbean Sea; CD159; CD159-10; CD159-17; CEPAG; CH22KW31; CH69-K09; Charles Darwin; CHO288-54; Comment; COMPCORE; Composite Core; consistent dating; Continental Slope Northeast Brazil; Core; CORE; Corner Rise; DAPC2; Denmark Strait; De Soto Canyon; DRILL; Drilling/drill rig; East Atlantic; ENAM9321; ENAM93-21; Event label; EW9209-1JPC; Faeroes Bank; Falkland Plateau, Southern Falkland Plateau (same site as GC526); Faroe Islands margin; Florida Strait; French Guiana; GC; GC528 CORE_NO 528; GeoB1023-5; GeoB1515-1; GeoB16202-2; GeoB16206-1; GeoB16224-1; GeoB1711; GeoB1711-4; GeoB1720-2; GeoB3202-1; GeoB3910-2; GeoB4240-2; GeoB5546-2; GeoB6201-5; GeoB7920-2; GeoB9508-5; GeoB9526-5; GEOFAR; GEOSCIENCES, MARMARCORE; GGC; GGC5; Giant gravity corer; GIK12392-1; GIK15669-1; GIK23415-9; GL1090; GL-1090; Glomar Challenger; Gravity corer; Gravity corer (Kiel type); GS07-150-17/1GC-A; Iceland; IMAGES I; IMAGES IX - PAGE; IMAGES V; IMAGES XV - Pachiderme; James Clark Ross; Joides Resolution; JOPSII-8; JR20110128; JR244; JR244-GC528; KAL; Kasten corer; KF13; KF16; KL; KM31; KN_USA; KN159-5; KN166-2; Knorr; KNR140; KNR140-2-51GGC; KNR140-51GGC; KNR159-5; KNR159-5-36GGC; KNR159-5-42JPC; KNR166-2; KNR166-2-26; KNR166-2-26JPC; KNR166-2-29; KNR166-2-29JPC; KNR166-2-31; KNR166-2-31JPC; KNR166-2-73; KNR166-2-73GGC; KNR197-10; KNR197-10-GGC17; KNR31GPC5; last 40 ky; LATITUDE; Leg162; Leg165; Leg172; Leg175; Leg94; Le Noroit; Le Suroît; LONGITUDE; M12392-1; M16/2; M17/2; M20/2; M25; M34/4; M35/1; M35003-4; M37/1; M39/1; M39/1_08-3; M39008-3; M42/4b; M46/2; M53; M53_169; M53/1; M6/6; M65/1; Marge Ibérique; Maria S. Merian; Marion Dufresne (1995); MD01-2461; MD022575; MD02-2575; MD02-2588; MD02-2588Q; MD02-2592; MD02-2594; MD03-2697; MD03-2698; MD03-2705; MD03-2707; MD04-2805CQ; MD04-2805Q; MD04-2845; MD07-3076; MD07-3076Q; MD08-3167; MD08-3180; MD08-3227G; MD09-3246; MD09-3256; MD09-3256Q; MD101; MD114; MD123; MD127; MD128; MD134; MD140; MD141; MD159; MD16-3511; MD16-3511Q; MD168; MD173; MD952002; MD95-2002; MD952006; MD95-2006; MD952010; MD95-2010; MD952014; MD95-2014; MD952037; MD95-2037; MD952039; MD95-2039; MD952040; MD95-2040; MD952041; MD95-2041; MD952042; MD95-2042; MD99-2281; MD99-2284; MD99-2331; MD99-2334; Meriadzec; Meteor (1964); Meteor (1986); Method comment; MSM20/3; N. Shetland channel; NA87-22; Namibia continental slope; Newfoundland margin; North Atlantic; North Atlantic/FLANK; North East Atlantic; Northeast Brasilian Margin; Norwegian Sea; OCE205-103GGC; OCE205-2-100GGC; OCE205-2-100GGGC; OCE205-2-103GGC; OCE326-GGC5; off Rio Paraiba do Sul; off West Africa; PALEOCINAT; PALEOCINAT II; PC; Persistent Identifier; PICABIA; Piston corer; Piston corer (BGR type); Polarstern; Porto Seamount; PRIVILEGE; PS2644-5; PS31; PS31/160-5; RAPiD-10-1P; RAPiD-17-5P; Reference/source; RETRO-2; REYKJANES-RÜCKEN; S94-2-KS04; SL; SO82; SO82_5-2; Sonne; South Atlantic; South Atlantic Ocean; Southern Ocean; South of Iceland; SU81-18; SU90-08; SU90-24; SU92; SU92-03; SWAF; Tagus-Sado canyon system; TNO57-21; Uniform resource locator/link to graphic; V29; V29-202; Vema; Victor Hensen; Vigo; Voring Plateau; western South Atlantic  (1)
  • Homogeneous catalysis
  • 2015-2019  (2)
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Keywords
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Year
  • 1
    Publication Date: 2015-05-29
    Description: Genome sequencing has uncovered a new mutational phenomenon in cancer and congenital disorders called chromothripsis. Chromothripsis is characterized by extensive genomic rearrangements and an oscillating pattern of DNA copy number levels, all curiously restricted to one or a few chromosomes. The mechanism for chromothripsis is unknown, but we previously proposed that it could occur through the physical isolation of chromosomes in aberrant nuclear structures called micronuclei. Here, using a combination of live cell imaging and single-cell genome sequencing, we demonstrate that micronucleus formation can indeed generate a spectrum of genomic rearrangements, some of which recapitulate all known features of chromothripsis. These events are restricted to the mis-segregated chromosome and occur within one cell division. We demonstrate that the mechanism for chromothripsis can involve the fragmentation and subsequent reassembly of a single chromatid from a micronucleus. Collectively, these experiments establish a new mutational process of which chromothripsis is one extreme outcome.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4742237/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4742237/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Zhang, Cheng-Zhong -- Spektor, Alexander -- Cornils, Hauke -- Francis, Joshua M -- Jackson, Emily K -- Liu, Shiwei -- Meyerson, Matthew -- Pellman, David -- GM083299-18/GM/NIGMS NIH HHS/ -- R01 GM061345/GM/NIGMS NIH HHS/ -- R01 GM083299/GM/NIGMS NIH HHS/ -- Howard Hughes Medical Institute/ -- England -- Nature. 2015 Jun 11;522(7555):179-84. doi: 10.1038/nature14493. Epub 2015 May 27.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉1] Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts 02215, USA [2] Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts 02215, USA [3] Broad Institute of Harvard and MIT, Cambridge, Massachusetts 02142, USA [4] Department of Cell Biology, Harvard Medical School, Boston, Massachusetts 02115, USA. ; 1] Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts 02215, USA [2] Department of Cell Biology, Harvard Medical School, Boston, Massachusetts 02115, USA [3] Department of Radiation Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts 02215, USA. ; 1] Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts 02215, USA [2] Department of Cell Biology, Harvard Medical School, Boston, Massachusetts 02115, USA. ; 1] Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts 02215, USA [2] Broad Institute of Harvard and MIT, Cambridge, Massachusetts 02142, USA. ; 1] Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts 02215, USA [2] Department of Cell Biology, Harvard Medical School, Boston, Massachusetts 02115, USA [3] Howard Hughes Medical Institute, Chevy Chase, Maryland 20815, USA. ; 1] Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts 02215, USA [2] Broad Institute of Harvard and MIT, Cambridge, Massachusetts 02142, USA [3] Department of Pathology, Harvard Medical School, Boston, Massachusetts 02115, USA [4] Center for Cancer Genome Discovery, Dana-Farber Cancer Institute, Boston, Massachusetts 02215, USA. ; 1] Department of Pediatric Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts 02215, USA [2] Broad Institute of Harvard and MIT, Cambridge, Massachusetts 02142, USA [3] Department of Cell Biology, Harvard Medical School, Boston, Massachusetts 02115, USA [4] Howard Hughes Medical Institute, Chevy Chase, Maryland 20815, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/26017310" target="_blank"〉PubMed〈/a〉
    Keywords: Cell Line ; Cell Survival ; *Chromosome Breakage ; Chromosome Segregation/genetics ; DNA Copy Number Variations/genetics ; *DNA Damage ; Gene Rearrangement/genetics ; Genomic Instability/genetics ; Humans ; *Micronuclei, Chromosome-Defective ; Mutation/genetics ; Neoplasms/genetics ; S Phase/genetics ; Single-Cell Analysis
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 2
    Publication Date: 2024-05-27
    Description: Rapid changes in ocean circulation and climate have been observed in marine-sediment and ice cores over the last glacial period and deglaciation, highlighting the non-linear character of the climate system and underlining the possibility of rapid climate shifts in response to anthropogenic greenhouse gas forcing. To date, these rapid changes in climate and ocean circulation are still not fully explained. One obstacle hindering progress in our understanding of the interactions between past ocean circulation and climate changes is the difficulty of accurately dating marine cores. Here, we present a set of 92 marine sediment cores from the Atlantic Ocean for which we have established age-depth models that are consistent with the Greenland GICC05 ice core chronology, and computed the associated dating uncertainties, using a new deposition modeling technique. This is the first set of consistently dated marine sediment cores enabling paleoclimate scientists to evaluate leads/lags between circulation and climate changes over vast regions of the Atlantic Ocean. Moreover, this data set is of direct use in paleoclimate modeling studies.
    Keywords: 053-2; 057-1; 087-1; 162-983; 165-1002; 172-1060; 175-1078C; 175-1084; 293; 311; 3664N/S; 63F/NL; 90b; 94-609; Agadir Canyon; ALIENOR; ALTITUDE; AMADEUS; Amazon Fan; AMOCINT, IMAGES XVII; Angola Basin; ARK-X/2; Atlantic; Atlantic Ocean; Atlantic sediment cores; Azores; BC; Benguela Current, South Atlantic Ocean; Blake-Bahama Outer Ridge, North Atlantic Ocean; Box corer; CALYPSO; Calypso Corer; Calypso square corer; Calypso Square Core System; CASQ; CASQS; Cayman Rise, Caribbean Sea; CD159; CD159-10; CD159-17; CEPAG; CH22KW31; CH69-K09; Charles Darwin; CHO288-54; Comment; COMPCORE; Composite Core; consistent dating; Continental Slope Northeast Brazil; Core; CORE; Corner Rise; DAPC2; Denmark Strait; De Soto Canyon; DRILL; Drilling/drill rig; East Atlantic; ENAM9321; ENAM93-21; Event label; EW9209-1JPC; Faeroes Bank; Falkland Plateau, Southern Falkland Plateau (same site as GC526); Faroe Islands margin; Florida Strait; French Guiana; GC; GC528 CORE_NO 528; GeoB1023-5; GeoB1515-1; GeoB16202-2; GeoB16206-1; GeoB16224-1; GeoB1711; GeoB1711-4; GeoB1720-2; GeoB3202-1; GeoB3910-2; GeoB4240-2; GeoB5546-2; GeoB6201-5; GeoB7920-2; GeoB9508-5; GeoB9526-5; GEOFAR; GEOSCIENCES, MARMARCORE; GGC; GGC5; Giant gravity corer; GIK12392-1; GIK15669-1; GIK23415-9; GL1090; GL-1090; Glomar Challenger; Gravity corer; Gravity corer (Kiel type); GS07-150-17/1GC-A; Iceland; IMAGES I; IMAGES IX - PAGE; IMAGES V; IMAGES XV - Pachiderme; James Clark Ross; Joides Resolution; JOPSII-8; JR20110128; JR244; JR244-GC528; KAL; Kasten corer; KF13; KF16; KL; KM31; KN_USA; KN159-5; KN166-2; Knorr; KNR140; KNR140-2-51GGC; KNR140-51GGC; KNR159-5; KNR159-5-36GGC; KNR159-5-42JPC; KNR166-2; KNR166-2-26; KNR166-2-26JPC; KNR166-2-29; KNR166-2-29JPC; KNR166-2-31; KNR166-2-31JPC; KNR166-2-73; KNR166-2-73GGC; KNR197-10; KNR197-10-GGC17; KNR31GPC5; last 40 ky; LATITUDE; Leg162; Leg165; Leg172; Leg175; Leg94; Le Noroit; Le Suroît; LONGITUDE; M12392-1; M16/2; M17/2; M20/2; M25; M34/4; M35/1; M35003-4; M37/1; M39/1; M39/1_08-3; M39008-3; M42/4b; M46/2; M53; M53_169; M53/1; M6/6; M65/1; Marge Ibérique; Maria S. Merian; Marion Dufresne (1995); MD01-2461; MD022575; MD02-2575; MD02-2588; MD02-2588Q; MD02-2592; MD02-2594; MD03-2697; MD03-2698; MD03-2705; MD03-2707; MD04-2805CQ; MD04-2805Q; MD04-2845; MD07-3076; MD07-3076Q; MD08-3167; MD08-3180; MD08-3227G; MD09-3246; MD09-3256; MD09-3256Q; MD101; MD114; MD123; MD127; MD128; MD134; MD140; MD141; MD159; MD16-3511; MD16-3511Q; MD168; MD173; MD952002; MD95-2002; MD952006; MD95-2006; MD952010; MD95-2010; MD952014; MD95-2014; MD952037; MD95-2037; MD952039; MD95-2039; MD952040; MD95-2040; MD952041; MD95-2041; MD952042; MD95-2042; MD99-2281; MD99-2284; MD99-2331; MD99-2334; Meriadzec; Meteor (1964); Meteor (1986); Method comment; MSM20/3; N. Shetland channel; NA87-22; Namibia continental slope; Newfoundland margin; North Atlantic; North Atlantic/FLANK; North East Atlantic; Northeast Brasilian Margin; Norwegian Sea; OCE205-103GGC; OCE205-2-100GGC; OCE205-2-100GGGC; OCE205-2-103GGC; OCE326-GGC5; off Rio Paraiba do Sul; off West Africa; PALEOCINAT; PALEOCINAT II; PC; Persistent Identifier; PICABIA; Piston corer; Piston corer (BGR type); Polarstern; Porto Seamount; PRIVILEGE; PS2644-5; PS31; PS31/160-5; RAPiD-10-1P; RAPiD-17-5P; Reference/source; RETRO-2; REYKJANES-RÜCKEN; S94-2-KS04; SL; SO82; SO82_5-2; Sonne; South Atlantic; South Atlantic Ocean; Southern Ocean; South of Iceland; SU81-18; SU90-08; SU90-24; SU92; SU92-03; SWAF; Tagus-Sado canyon system; TNO57-21; Uniform resource locator/link to graphic; V29; V29-202; Vema; Victor Hensen; Vigo; Voring Plateau; western South Atlantic
    Type: Dataset
    Format: text/tab-separated-values, 563 data points
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