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  • 1
    Publication Date: 2016-06-17
    Description: Toll receptors play an important role in the innate immunity of invertebrates. All reported Tolls have only one Toll/interleukin-1 receptor (TIR) domain at the C-terminal. In this study, numerous Tolls with tandem TIRs at the C-terminal were found in molluscs. Such Tolls presented an extra TIR (TIR-1) compared with Toll-I. Thus, Toll-I might be the ancestor of tandem TIRs containing Toll. To test this hypothesis, 83 Toll-I and Toll-2 (most have two TIRs, but others seem to be the evolutionary intermediates) genes from 29 shellfish species were identified. These Tolls were divided into nine groups based on phylogenetic analyses. A strong correlation between phylogeny and motif composition was found. All Toll proteins contained the TIR-2 domain, whereas the TIR-1 domain only existed in some Toll-2 protein, suggesting that TIR-1 domain insertion may play an important role in Toll protein evolution. Further analyses of functional divergence and adaptive evolution showed that some of the critical sites responsible for functional divergence may have been under positive selection. An additional intragenic recombination played an important role in the evolution of the Toll-I and Toll-2 genes. To investigate the functional difference of Toll-I and Toll-2, over expression of Hcu_Toll-I or Hcu_Toll-2-2 in Drosophila S2 cells was performed. Results showed that Hcu_Toll-2-2 had stronger antimicrobial peptide (AMP) activity than Hcu_Toll-I. Therefore, enhanced AMP-induced activity resulted from tandem TIRs in Toll-2s of molluscs during evolution history.
    Keywords: genetics, immunology, bioinformatics
    Electronic ISSN: 2054-5703
    Topics: Natural Sciences in General
    Published by Royal Society
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  • 2
    Publication Date: 2018-09-13
    Description: The surface-initiated atom transfer radical polymerization method was used to graft glycidyl methacrylate (GMA) on chloromethylated cross-linked styrene-divinylbenzene resin, and then the novel diethylenetriamine-functionalized resin was prepared through the amination reaction between amino group of diethylenetriamine and epoxy group in GMA. The adsorption properties were evaluated with As(V). The adsorption of As(V) was mainly regarded as the electrostatic interaction between the adsorbent and the adsorbate by analysing the relationship between adsorption capacity with the solution pH, adsorption isotherm and adsorption kinetics. The maximum sorption capacity of As(V) was 5.25 mmol g –1 . The adsorption isotherms of As(V) were best described by the Langmuir model, and its adsorption kinetics followed the pseudo-second-order kinetic equation. The adsorption of As(V) ions was hardly affected by common coexisting ions such as Na(I), K(I), Ca(II) and Mg(II), whereas it was slightly decreased when Fe(II) and Zn(II) coexisted in the solution, which illustrates the selective adsorption of As(V) from wastewater. Ten adsorption–desorption cycles demonstrated that the resin possessed high recycling efficiency and stability and was suitable for efficient removal of metal ions from aqueous solution.
    Keywords: environmental chemistry
    Electronic ISSN: 2054-5703
    Topics: Natural Sciences in General
    Published by Royal Society
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  • 3
    Publication Date: 2018-09-20
    Description: In this work, an untargeted metabolomic method based on ultra-high-performance liquid chromatography-quadrupole time-of-flight mass spectrometry (UPLC-QTOF/MS) in MS E (E represents collision energy) mode was exploited to determine the dynamic metabolic alterations in the plasma of male C57BL/6 mice during the onset and development of lung carcinoma. Plasma samples were collected from control and model mice (male C57BL/6 mice experimentally inoculated with the Lewis lung carcinoma cells) at 7 and 14 days post-inoculation (DPI). As a result, 15 dysregulated metabolites, including cholesterol sulphate, tiglylcarnitine, 1-palmitoylglycerophosphoinositol, 2-stearoylglycerophosphoinositol, stearoylcarnitine, PC(20:2(11Z,14Z)/16:0), PC(22:4(7Z,10Z,13Z,16Z)/14:0), PC(22:5(7Z,10Z,13Z,16Z,19Z)/14:0), PC(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/16:0), 12,20-Dioxo-leukotriene B4, sphingosine 1-phosphate(d19:1-P), sphingomyelin(d18:0/16:1(9Z)), lysoPC(16:0), lysoPC(18:0) and lysoPC(20:4(5Z,8Z,11Z,14Z)), were identified in the plasma of model mice with xenografts at both 7 and 14 DPI. All the altered metabolites associated with the onset and development of lung carcinoma were involved in the metabolism of glycerophospholipid, fatty acid, sphingolipid and arachidonic acid. The feasible utility of these endogenous biomarkers as potential diagnostic indicators was validated through receiver operating characteristic curve analysis. Collectively, these findings provide a systematic view of metabolic changes linked to the onset and development of lung carcinoma.
    Keywords: systems biology, cellular biology
    Electronic ISSN: 2054-5703
    Topics: Natural Sciences in General
    Published by Royal Society
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  • 4
    Publication Date: 2016-04-28
    Description: Recent works revealed that the energy required to control a complex network depends on the number of driving signals and the energy distribution follows an algebraic scaling law. If one implements control using a small number of drivers, e.g. as determined by the structural controllability theory, there is a high probability that the energy will diverge. We develop a physical theory to explain the scaling behaviour through identification of the fundamental structural elements, the longest control chains (LCCs), that dominate the control energy. Based on the LCCs, we articulate a strategy to drastically reduce the control energy (e.g. in a large number of real-world networks). Owing to their structural nature, the LCCs may shed light on energy issues associated with control of nonlinear dynamical networks.
    Keywords: mathematical physics, complexity
    Electronic ISSN: 2054-5703
    Topics: Natural Sciences in General
    Published by Royal Society
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  • 5
    Publication Date: 2018-08-23
    Description: The deformation and fracture characteristics of shale in the Changning-Xingwen region were experimentally studied under triaxial cyclic loading with a controlled pore-water pressure. An RLW-2000M microcomputer-controlled coal-rock rheometer was used in the State key Laboratory of coal mine disaster dynamics and control in Chongqing University. These experimental results have indicated the following. (i) The shale softened after being saturated with water, while its failure strength decreased with the increase of axial strain. (ii) A complete cyclic loading–unloading process can be divided into four stages under the coupling action of axial cyclic loading and pore-water pressure; namely the slow or accelerated increasing of strain in the loading stage, and the slow or accelerated decreasing of strain in the unloading stage. (iii) The axial plastic deformation characteristics were similar when pore-water pressures were set to 2, 6 and 10 MPa. Nevertheless, the shale softened ostensibly and fatigue damage occurred during the circulation process when the pore-water pressure was set to 14 MPa. (iv) It has been observed that the mean strain and strain amplitude under axial cyclic are positively correlated with pore-water pressure, while the elastic modulus is negatively correlated with pore-water pressure. As the cycle progresses, the trends in these parameters vary, which indicates that the deformation and elastic characteristics of shale are controlled by pore-water pressure and cyclic loading conditions. (v) Evidenced via triaxial compression tests, it was predominantly shear failure that occurred in the shale specimens. In addition, axial cyclic loading caused the shale to generate complex secondary fractures, resulting in the specimens cracking along the bedding plane due to the effect of pore-water pressure. This study provides valuable insight into the understanding of the deformation and failure mechanisms of shale under complicated stress conditions.
    Keywords: engineering geology
    Electronic ISSN: 2054-5703
    Topics: Natural Sciences in General
    Published by Royal Society
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  • 6
    Publication Date: 2018-10-18
    Description: Chromium deposition and poisoning of La 2 NiO 4 cathode of solid oxide fuel cell were studied. La 2 NiO 4 cathode showed stable performance in the presence of metallic interconnects. Comparing with the polarization resistance ( R p ) of La 2 NiO 4 cathode in the absence of metallic interconnects, R p did not change in the presence of metallic interconnect. After electrical conductivity relaxation method, La 2 NiO 4 with high surface oxygen diffusion coefficients working under Cr atmosphere improved the oxygen reduction kinetics and increased cathode O 2 reduction reaction rates. No chromium deposition was observed on the La 2 NiO 4 cathode surface after polarization for 20 h at 800°C. The chemical compatibility of La 2 NiO 4 /Cr 2 O 3 and La 2 NiO 4 /Gd 0.1 Ce 0.9 O 1.95 (GDC) study indicates that La 2 NiO 4 did not react with Cr 2 O 3 and GDC under the operating temperature. The results indicate that La 2 NiO 4 cathode is a potential chromium-tolerant material of solid oxide fuel cell.
    Keywords: materials science
    Electronic ISSN: 2054-5703
    Topics: Natural Sciences in General
    Published by Royal Society
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  • 7
    Publication Date: 2018-06-07
    Description: A novel polyamine-type starch/glycidyl methacrylate (GMA) copolymer with a high capacity for the adsorption of heavy metal ions was prepared via graft copolymerization of GMA and corn starch and a subsequent amination reaction between amino group of diethylenetriamine and epoxy group in GMA. The copolymers were characterized by Fourier transform infrared spectrometry, X-ray diffraction and scanning electron microscopy, and adsorption properties on modified starch of Cu(II), Pb(II), Cd(II) and Cr(III) were studied. By analysing the relationship between adsorption capacity and pH, adsorption isotherms and adsorption kinetics, it is proved that the adsorption of the four metal ions is mainly based on the chemical adsorption of coordination. The maximum adsorption capacities of the copolymer were up to 2.33, 1.25, 0.83 and 0.56 mmol g –1 for Cu(II), Pb(II), Cd(II) and Cr(III), respectively. The adsorption of the four concerned metal ions was hardly affected by common coexisting ions such as Na(I), K(I), Ca(II) and Mg(II), whereas it was slightly decreased when Fe(II) and Zn(II) coexisted in the solution, which illustrates the selective adsorption of Cu(II), Pb(II), Cd(II) and Cr(III) from wastewater. After 10 cycles of adsorption–desorption experiments, there was no significant change in the adsorption capacity, indicating that the polyamine-type starch/GMA copolymer has high adsorption capacity and good reusability.
    Keywords: environmental chemistry
    Electronic ISSN: 2054-5703
    Topics: Natural Sciences in General
    Published by Royal Society
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  • 8
    Publication Date: 2018-07-05
    Description: Micro-arc oxidation (MAO) is a plasma-assisted electrochemistry method to prepare protective ceramic coatings on aluminium alloys. Alloy elements of the Al-alloy substrate, such as Si, Cu, Mg and Li, have effects on the microstructure and composition of the MAO coatings. Usually, silicon distributes in the cast Al–Si alloy substrate as small laths and they cover approximately 10% of the substrate surface. Therefore, their effects on the growth process and microstructure of the MAO coatings are worthy of notice. In the present study, oxide coatings with a thickness of 15–18 µm were prepared on the ZL109 Al–Si alloy by MAO. The phase content, surface morphology and element distribution of the coatings were investigated by X-ray diffraction, grazing incidence X-ray diffraction, scanning electron microscope, and electron probe micro-analysis respectively. The average hardness of the coatings was 622.3 ± 10.2 HV 0.05 . The adhesive strength of the coatings is 40.55 ± 2.55 N, and the adhesion of the coatings could be rated as 5B by tape test according to ASTM D3359-17 standard test methods, which indicated a high adhesive strength between the MAO coating and substrate. The effects of silicon laths on surface morphology and composition of the coatings were discussed, and a model was put forward to describe the growth process of the MAO coatings on cast Al–Si alloys. The authors believe that the high silicon content of the substrate has no adverse influence on the structure and properties of the MAO coating on the ZL109 alloy.
    Keywords: materials science, structural engineering
    Electronic ISSN: 2054-5703
    Topics: Natural Sciences in General
    Published by Royal Society
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  • 9
    Publication Date: 2017-04-27
    Description: A previous study found the key transcription factor of Litopenaeus vannamei PERK-eIF2α pathway cyclic AMP-dependent transcription factor 4 (LvATF4) was involved in the transcriptional regulation of white spot syndrome virus (WSSV) gene wsv023 . Knocked-down expression of LvATF4 reduced the viral copy number and the cumulative mortality of WSSV-infected shrimp. These results suggested that wsv023 may be critical to WSSV infection but the precise function of wsv023 was still unknown. By using co-immunoprecipitation and pull-down assays, we show that wsv023 interacts with L. vannamei gamma complex-associated protein 2 (LvGCP2), which is the core protein of the -tubulin small complex. Knocked-down, the wsv023 gene significantly reduced the copy number of WSSV in L. vannamei muscle, as well as the cumulative mortality of infected shrimp. And PERK-eIF2α pathway inhibition also showed reduced virus copy number and abrogated shrimp mortality. Furthermore, overexpression of wsv023 inhibited the formation of microtubules in 293T cells. Flow cytometry revealed that WSSV infection similarly decreased the formation of microtubules in L. vannamei haemocytes. These findings suggested that wsv023 plays a role in microtubule organization in host cells, which in turn may be beneficial to WSSV.
    Keywords: immunology, cellular biology, environmental science
    Electronic ISSN: 2054-5703
    Topics: Natural Sciences in General
    Published by Royal Society
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  • 10
    Publication Date: 2018-02-15
    Description: Batch experiments were conducted to test the effects of various solution properties, such as pH, temperature, initial concentration and anoxic and aerobic atmosphere, on Cd removal by nanoscale zerovalent iron (nZVI) supported on industrial coal fly ash. Cd (II) could be removed by adsorption on fly ash-nZVI in a very short time (5 min) with high removal rates (greater than 99.9%) over a wide range of concentration (5–100 mg l –1 ). Cd (II) was physically adsorbed on the surface of fly ash-nZVI. The preparation of fly ash-nZVI can incorporate the use of waste media, making the overall adsorbent more removal efficient and low cost.
    Keywords: chemical engineering, environmental chemistry
    Electronic ISSN: 2054-5703
    Topics: Natural Sciences in General
    Published by Royal Society
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