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  • Atomic, Molecular and Optical Physics  (74)
  • Wiley-Blackwell  (74)
  • Annual Reviews
  • 2015-2019
  • 1980-1984  (74)
  • 1955-1959
  • 1
    Electronic Resource
    Electronic Resource
    Damping of DNA vibration modes by viscous solvents (1981)
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 20 (1981), S. 271-276 
    Details
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The problem of viscous damping of vibrating DNA polymer in aqueous solution is solved in the low-amplitude limit for all acoustic branches of the spectrum. The acoustic spectrum covers the microwave region of frequencies. The viscious damping is found to be a strong function of frequency, singular both at very low and very high frequencies. All acoustic modes are overdamped, implying that the observation of well-defined resonances in DNA requires highly structured water or very dry material.
    Additional Material: 4 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/qua.560200725
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  • 2
    Electronic Resource
    Electronic Resource
    Exchange, correlation, and band gaps in conjugated linear chains (1983)
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 23 (1983), S. 1065-1072 
    Details
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In the case of conjugated polyenic chains (polyacetylene), the relationships between the long- (or short-) range nature of the restricted Hartree-Fock exchange interaction, the role of correlation effects, and the size of energy gaps are illustrated.
    Additional Material: 1 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/qua.560230330
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  • 3
    Electronic Resource
    Electronic Resource
    Relativistically parametrized extended-Hückel calculations. II. Orbital energies of group-IV tetrahalides and tetramethyls (1980)
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 18 (1980), S. 347-355 
    Details
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Relativistically parametrized extended-Hückel (REX) calculations are reported for MX4 (M = Ti, Zr, Hf, C, Si, Ge, Sn, Pb; X = Cl, Br, I) and for M(CH3)4 (M = Ti, C, Si, Ge, Sn, Pb). Satisfactory agreement is obtained with experiment and with earlier assignments both for the energy levels and for their relativistic splittings. This encourages the use of REX for assigning PES spectra. Double-ζ radial functions (REX and EHT) are given for Cl, Br, and I.
    Additional Material: 2 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/qua.560180203
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  • 4
    Electronic Resource
    Electronic Resource
    Hydrophobic “pocket” on photosynthesizing membrane near photosystem IIPresented at the International Conference on Quantum Chemistry, Biology, and Pharmacology held at Kiev, U.S.S.R., September 1978. (1980)
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 17 (1980), S. 361-366 
    Details
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Studies concerning the effect of 2-alkyl pyridine N-oxides with different substituents on electron transfer, phosphorylation, and light-dependent proton transport in photosynthesizing membranes of chloroplasts were conducted. It is determined that 2-alkyl pyridine N-oxides with short alkyl chains stimulate the Hill reaction and light-dependent proton transport inside chloroplasts. Compounds having alkyl residues with 6-10 carbon atoms in the chain inhibit electron transport, ADP phosphorylation, and reduction of ferrocyanide in thylakoids. A conclusion is drawn on the presence of the hydrophobic “pocket,” which is of importance for organization of the electron-transport chain of chloroplasts, near photosystem II.
    Additional Material: 4 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/qua.560170218
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  • 5
    Electronic Resource
    Electronic Resource
    Relation between total energy, electronic potential at the nucleus, and chemical potential of positive ions (1984)
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 26 (1984), S. 145-149 
    Details
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Simple density functional theory gives the following relation between the energy EZ, N of an ion of nuclear charge Z and N electrons, the potential V(0) created at the nucleus by the electronic cloud, and the chemical potential μ \documentclass{article}\pagestyle{empty}\begin{document}$$ E_{Z,N} = \frac{3}{7}(ZV(0) + N_\mu). $$\end{document}Using Hartree - Fock values for V(0) and μ, this equation has been tested in several isoelectronic series with 3 ≤ N ≤ 28. The importance of the term 3Nμ/7 increases as the degree of ionization increases.
    Additional Material: 5 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/qua.560260110
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  • 6
    Electronic Resource
    Electronic Resource
    Structure and function of protamines: An investigation of clupeine properties by nuclear magnetic resonance (1984)
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 26 (1984), S. 873-888 
    Details
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: In this paper a detailed study of the structural properties of the three main fractions YI, YII, and Z of clupeine (protamines) has been performed with the aid of nuclear magnetic resonance methods. The investigation includes chemical shift data of protons and C-13 nuclei and measurement of the T1 relaxation times of the C-13 nuclei. These data demonstrate that the flexibility of the three fractions is different and that in the presence of inorganic phosphate fraction YI exhibits structural changes more relevant than the other two fractions. The measurement of the relaxation times, under the assumption of a rigid ellipsoid model, gives an estimate of the rough molecular size of the clupeine fractions. Different side chain mobilities that complement the previous observations based on chemical shift data are determined. A further extension of this work concerns the interaction of the clupeines with natural mononucleotides. An appreciable interaction takes place between fraction YI and purinic nucleotides while a simple electrostatic interaction seems to exist with the other two fractions. A possible explanation of this different behavior seems to involve the formation of large aggregates solely in the case of fraction YI.
    Additional Material: 8 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/qua.560260524
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  • 7
    Electronic Resource
    Electronic Resource
    Direct determination of improved contraction coefficients by a least-squares approach (1981)
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 20 (1981), S. 63-71 
    Details
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: A simple method is presented for the construction of contracted Gaussian basis sets with little or no energy-optimization. The contraction coefficients are fitted by a least-squares procedure to the orbital expansion coefficients of the completely decontracted basis. The method is applied to the construction of minimum basis sets of first-row atoms from (6s, 3p) uncontracted atomic basis sets, and of [6s, 4p] contracted bases from (12s, 8p) uncontracted bases of second-row atoms. The results are better than using the expansion coefficients directly and are usually comparable to fully energy-optimized bases.The method can also be used to generate balanced atomic contraction coefficients from molecular calculations. This is shown with a (7s, 3p) and a (6s, 3p) basis, both contracted to a minimum basis. The contracted basis sets are employed in several small molecules, and the results are compared with calculations done with the decontracted bases and with contracted bases where the contraction coefficients were energy optimized in the molecules.
    Additional Material: 5 Tab.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/qua.560200705
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  • 8
    Electronic Resource
    Electronic Resource
    Molecular orbital studies on nucleoside antibiotics V. Conformation of pyrazofurins (1981)
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 20 (1981), S. 129-138 
    Details
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Conformational properties of pyrazofurins, which were previously designated as pyrazomycins in both β- and α-anomeric forms, have been investigated by the PCILO method. The results indicate that the most preferred conformation for β anomer is anti-gg, while that for α anomer is syn-gg when intramolecular hydrogen bonding between sugar and the base is allowed. However, in the absence such hydrogen bonding, which mimicks the situation in aqueous solution, both β and α pyrazofurins show exactly similar preference for anti-gg conformation. The biological significance of this result has been discussed. Further the β anomer is energetically more favorable than the α anomer. This result is in agreement with the experimental observations, which indicate that β pyrazofurin is more populated than a pyrazofurin in aqueous solution at room temperature.
    Additional Material: 5 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/qua.560200711
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  • 9
    Electronic Resource
    Electronic Resource
    NMR probes of the spatial arrangement of substrates at the active site of creatine kinase (1981)
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 20 (1981), S. 247-256 
    Details
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: To study the arrangement of substrates at the active site of creatine kinase, we have measured the paramagnetic effects of CrADP, an exchange-incrt paramagnetic analog of MgADP, on the nuclear spin lattice relaxation rates 1 /T1 of the protons of water and the protons and phosphorus nucleus of P-creatine in the presence and absence of rabbit muscle creatine kinase. Relaxivity titrations measuring the paramagnetic effect of CrADP on 1/T1 of water protons at several concentrations of the enzyme in the presence of P-creatine were used to study the binding of CrADP to the enzyme·P-creatine complex. The existence of a ternary enzyme·CrADP-P-creatine complex was confirmed by observing the paramagnetic effects of enzyme-bound CrADP on the 1 /T1 of the 31P nucleus and protons of P-creatine. From the magnitude of paramagnetic effects arising within the enzyme·CrADP·P-creatine complex, using the electron spin relaxation time estimated from the magnetic field dependence of 1 /T1 of fast exchanging water protons, a Cr3+-phosphorus distance of 6.0 Å, and Cr3+-proton distances of 11 and 12 Å, were obtained. These results imply the absence of a direct coordination of the phosphoryl group of P-creatine by the nucleotide-bound metal on creatine kinase but indicate proximity of enzyme-bound substrates and are consistent with van der Waals contact between a phosphoryl oxygen of P-creatine and the hydration sphere of the nucleotide-bound metal. Since the metal ion is coordinated to the γ-phosphoryl group of ATP on the enzyme, the overall migration of the phosphoryl group during phosphoryl transfer is ∼3 Å, toward the nucleotide-bound metal.Creatine kinase failed to catalyze phosphoryl transfer from P-creatine to CrADP as monitored by the disappearance of the 31P NMR signal of P-creatine in a solution containing CrADP, P-creatine and creatine kinase. The ability of an isomer of β,γ-bidentate CrATP to act as a partial substrate and our observation of the absence of phosphoryl transfer from P-creatine to CrADP indicate that metal ion coordination of the transferable phosphoryl group precedes phosphoryl transfer and is a requirement of the creatine kinase reaction.
    Additional Material: 3 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/qua.560200722
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  • 10
    Electronic Resource
    Electronic Resource
    Effective handling of a large configuration state function expansion for an MCSCF state and improved efficiency for two-electron integral transformations in MCSCF (1983)
    New York, NY : Wiley-Blackwell
    International Journal of Quantum Chemistry 23 (1983), S. 789-809 
    Details
    ISSN: 0020-7608
    Keywords: Computational Chemistry and Molecular Modeling ; Atomic, Molecular and Optical Physics
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Effective solutions for two difficulties which may be present in MCSCF calculation are discussed: (i) We show how the large configuration state function state expansion case may be handled simply and effectively without the introduction of extraneous projection operators or Lagrange multipliers; (ii) we present a simplified two-electron integral transformation procedure which significantly reduces the operation count (and hence computational efficiency is increased) for second order and particularly for third order MCSCF procedures. The procedures we introduce use some freedom available in the orthogonal complement Cl space and the virtual orbital space to simplify MCSCF calculations.
    Additional Material: 4 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/qua.560230304
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