ALBERT

Description: Several resources and standards for indexing food descriptors currently exist, but their content and interrelations are not semantically and logically coherent. Simultaneously, the need to represent knowledge about food is central to many fields including biomedicine and sustainable development. FoodON is a new ontology built to interoperate with the OBO Library and to represent entities which bear a “food role”. It encompasses materials in natural ecosystems and food webs as well as humancentric categorization and handling of food. The latter will be the initial focus of the ontology, and we aim to develop semantics for food safety, food security, the agricultural and animal husbandry practices linked to food production, culinary, nutritional and chemical ingredients and processes. The scope of FoodON is ambitious and will require input from multiple domains. FoodON will import or map to material in existing ontologies and standards and will create content to cover gaps in the representation of food-related products and processes. As a robust food ontology can only be created by consensus and wide adoption, we are currently forming an international consortium to build partnerships, solicit domain expertise, and gather use cases to guide the ontology’s development. The products of this work are being applied to research and clinical datasets such as those associated with the Canadian Healthy Infant Longitudinal Development (CHILD) study which examines the causal factors of asthma and allergy development in children, and the Integrated Rapid Infectious Disease Analysis (IRIDA) platform for genomic epidemiology and foodborne outbreak investigation.

Description: The construction of high capacity data sharing networks to support increasing government and commercial data exchange has highlighted a key roadblock: the content of existing Internet-connected information remains siloed due to a multiplicity of local languages and data dictionaries. This lack of a digital lingua franca is obvious in the domain of human food as materials travel from their wild or farm origin, through processing and distribution chains, to consumers. Well defined, hierarchical vocabulary, connected with logical relationships—in other words, an ontology—is urgently needed to help tackle data harmonization problems that span the domains of food security, safety, quality, production, distribution, and consumer health and convenience. FoodOn (http://foodon.org) is a consortium-driven project to build a comprehensive and easily accessible global farm-to-fork ontology about food, that accurately and consistently describes foods commonly known in cultures from around the world. FoodOn addresses food product terminology gaps and supports food traceability. Focusing on human and domesticated animal food description, FoodOn contains animal and plant food sources, food categories and products, and other facets like preservation processes, contact surfaces, and packaging. Much of FoodOn’s vocabulary comes from transforming LanguaL, a mature and popular food indexing thesaurus, into a World Wide Web Consortium (W3C) OWL Web Ontology Language-formatted vocabulary that provides system interoperability, quality control, and software-driven intelligence. FoodOn compliments other technologies facilitating food traceability, which is becoming critical in this age of increasing globalization of food networks.

Description: The original version of this Article included an incorrect competing interests statement, which read ‘The authors declare no competing interests’, rather than the correct ‘The authors declare the following competing interest: Steve Nicol has been employed to provide scientific advice to the Association of Responsible Krill harvesting companies.’ This has been corrected in both the PDF and HTML versions of the Article.

Description: Severe winter windstorms have become an increasingly common occurrence over the last decades in northwestern Europe. Although there exists considerable uncertainty, storminess is projected to increase in the future. On centennial to millennial timescales in particular, the mechanisms forcing storminess remain unsettled. We contribute to available palaeostorm records by reconstructing changes over the last 6670 years using a coastal peat sequence retrieved from the ombrotrophic Laphroaig bog on Islay, southwestern Scotland. We use a combination of ash content, grain size and elemental chemistry to identify periods of greater storminess which are dated to 6605, 6290-6225, 5315-5085, 4505, 3900-3635, 3310-3130, 2920-2380, 2275-2190, 2005-1860, 1305-1090, 805-435 and 275 cal. a BP. Storm signals in the first half of the record up to ~3000 cal year BP are mainly apparent in the grain size changes. Samples from this time period also have a different elemental signature than those later in the record. We speculate that this is due to receding sea levels and the consequent establishment of a new sand source in the form of dunes, which are still present today. The most significant events and strongest winds are found during the Iron Ages Cold Epoch (2645 cal. a BP), the transition into, and in the middle of, the Roman Ages Warm Period (2235 and 1965 cal. a BP) and early in the Little Ice Age (545 cal. a BP). The Laphroaig record generally agrees with regionally relevant peat palaeostorm records from Wales and the Outer Hebrides, although the relative importance of the different storm periods is not the same. In general, stormier periods are coeval with cold periods in the region as evidenced by parallels with increased ice rafted debris in the North Atlantic, highlighting that sea ice conditions could impact future storminess and storm track position.

Description: Legs 173 and 149 of the Ocean Drilling Program profiled a zone of exhumed mantle peridotite at the ocean-continent transition (OCT) beneath the Iberia Abyssal Plain. The zone of exhumed peridotite appears to be tens of kilometers wide and is situated between blocks of continental crust and the first products of ocean accretion. Exhumed peridotite is 95-100% serpentinised to probable depths of 2-3 km. Down core oxygen isotope profiles of serpentinised peridotite at Sites 1068 and 1070 (Leg 173) show evidence for two fluid infiltration events. The earlier event involved pervasive infiltration of comparatively warm (〉175°C) sea water and accompanied serpentinisation. The later event involved structurally focused infiltration of comparatively cool (650-150°C) sea water and accompanied active mantle exhumation. We therefore conclude that the uppermost mantle was serpentinised before it was exhumed at the Iberian OCT. Implicit to this conclusion is that a sizeable region of serpentinised mantle existed directly beneath thinned but intact continental crust. Serpentinite has comparatively low density, low frictional strength and low permeability. The presence of such a "soft" layer may have localised deformation and consequently promoted detachment-style exhumation of the uppermost mantle. The low permeability of a serpentinite 'cap' layer might help to explain the lack of observed melt at the Iberian OCT.