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  • Atomic and molecular processes in external fields, including interactions with strong fields and short pulses  (1)
  • Inorganic Chemistry  (1)
  • Nucleic acid modification  (1)
  • 2015-2019  (2)
  • 2010-2014
  • 1975-1979  (1)
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  • 1
    Publication Date: 2018-09-18
    Description: Author(s): S. Augustin, M. Schulz, G. Schmid, K. Schnorr, E. V. Gryzlova, H. Lindenblatt, S. Meister, Y. F. Liu, F. Trost, L. Fechner, A. N. Grum-Grzhimailo, S. M. Burkov, M. Braune, R. Treusch, M. Gisselbrecht, C. D. Schröter, T. Pfeifer, and R. Moshammer A kinematically complete experiment on two-photon double ionization of Ar by free-electron laser radiation with a photon energy of 27.93 eV was performed. The electron energy spectra show that double ionization is dominated by the sequential process. Comparison of the electron angular distributions ... [Phys. Rev. A 98, 033408] Published Mon Sep 17, 2018
    Keywords: Atomic and molecular processes in external fields, including interactions with strong fields and short pulses
    Print ISSN: 1050-2947
    Electronic ISSN: 1094-1622
    Topics: Physics
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  • 2
    Publication Date: 2015-11-17
    Description: The combination of Reverse Transcription (RT) and high-throughput sequencing has emerged as a powerful combination to detect modified nucleotides in RNA via analysis of either abortive RT-products or of the incorporation of mismatched dNTPs into cDNA. Here we simultaneously analyze both parameters in detail with respect to the occurrence of N -1-methyladenosine (m 1 A) in the template RNA. This naturally occurring modification is associated with structural effects, but it is also known as a mediator of antibiotic resistance in ribosomal RNA. In structural probing experiments with dimethylsulfate, m 1 A is routinely detected by RT-arrest. A specifically developed RNA-Seq protocol was tailored to the simultaneous analysis of RT-arrest and misincorporation patterns. By application to a variety of native and synthetic RNA preparations, we found a characteristic signature of m 1 A, which, in addition to an arrest rate, features misincorporation as a significant component. Detailed analysis suggests that the signature depends on RNA structure and on the nature of the nucleotide 3' of m 1 A in the template RNA, meaning it is sequence dependent. The RT-signature of m 1 A was used for inspection and confirmation of suspected modification sites and resulted in the identification of hitherto unknown m 1 A residues in trypanosomal tRNA.
    Keywords: Nucleic acid modification
    Print ISSN: 0305-1048
    Electronic ISSN: 1362-4962
    Topics: Biology
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  • 3
    Electronic Resource
    Electronic Resource
    Weinheim : Wiley-Blackwell
    Zeitschrift für anorganische Chemie 441 (1978), S. 125-164 
    ISSN: 0044-2313
    Keywords: Chemistry ; Inorganic Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Description / Table of Contents: Formation of Organosilicon Compounds. 72. The Reactivity of Carbosilanes and their C-Chlorinated Derivatives in Reactions with CH3MgCl and LiCH3Reactions of (H3Si—CH2)2SiH2 1, (H2Si—CH2)3 2, (H3Si)2CCl2 3, (H3Si)2CHCl 4, H3Si—CCl2—SiH2-CH2-SiH3 5, and (H3Si—CCl2)2SiH2 6 as well as H3SiCH2Cl, H3SiCHCl2, and H3SiCCl3 with meMgCl and Lime (me = CH3) respectively are reported. In 1 and 2 by using tetrahydrofurane (THF) as a solvent, methylation to a higher degree is possible. The C-chlorination increases the activation of the Si—H group. Reactions of the C-chlorinated compounds result in Si—H substitution (maintaining of molecular frame), in cleavage and enlargement of the molecular frame and in transformation of CCl2 group into CHCl and CH2 groups respectively. Reactions with meMgCl in THF and with Lime in diethylether (Et2O) favour the cleavage of the molecular and the hydrogenation of the CCl2 group. The methylation of compound 5 occures on the Si—H groups neighbouring the CCl2 groups. The reactivity of these Si—H groups is decreased by increasing methylation. Reacting compound 6 with meMgCl in Et2O cleavage reations dominate. However, using cyclohexane as a solvent this cleavage reaction recedes in favour of the formation of 1,3,5-trisilapentane, containing a CCl2 group and a CHCl or a CH2 group. Thereby however, the methylation of only two SiH groups is observed. The 1H-, 29Si-, and 13C-n.m.r. data allow an assessment of progressing SiH-methylation within the homologous series.
    Notes: Es wird über Umsetzungen von (H3Si—CH2)2SiH2 1, (H2Si—CH2)3 2, (H3Si)2CCl2 3, (H3Si)2CHCl 4, H3Si—CCl2—SiH2—CH2-SiH3 5 und (H3Si—CCl2)2SiH2SiH2 6 sowie von H3Si—CH2Cl, H3Si—CHCl2, H3Si—CCl3 mit meMgCl bzw. Lime (me = CH3) berichtet. In 1 und 2 werden durch Verwendung von Tetrahydrofuran (THF) als Lösungsmittel höhere Methylierungsstufen ermöglicht. Die C-Chlorierung bewirkt eine Aktivierung der Si—H-Gruppe. Die C-chlorierten Verbindungen reagieren unter Si—H Substitution (Erhalt des Molekülgerüstes), unter Spaltungen und Vergrößerungen des Molekügerüstes und unter Hydrierung der CCl2-Gruppe zu der CHCl- bzw. CH2-Gruppe. Bei Umsetzungen mit meMgCl in THF oder mit Lime in Diäthyläther (Et2O) werden Reaktionen begünstigt, die unter Molekülspaltung und CCl2-Hydrierung ablaufen. In 5 beginnt die Methylierung an den der CCl2-Gruppe benachbarten SiH-Gruppen, deren Reaktionsfähigkeit mit steigendem Methylierungsgrad sinkt. Bei 6 bestimmen die Si—C-Spaltungen den Reaktionsablauf (Umsetzung mit meMgCl in Et2O), der aber durch Verwendung von Cyclohexan als Lösungsmittel zurückgedrängt wird zugunsten der Bildung von 1,3,5-Trisilapentanen mit einer CCl2- und einer CHCl- oder CH2-Gruppe, wobei aber nur maximal die Methylierung von zwei SiH-Gruppen erreicht wird. Die 1H-, 29Si- und 13C-NMR-Daten erlauben eine Abschätzung des Verlaufs der SiH-Methylierung innerhalb der homologen Reihen.
    Additional Material: 5 Ill.
    Type of Medium: Electronic Resource
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