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  • 2020-2024  (11)
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  • 1
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    Physico-chemical conditions during a summer-autumn transition in the Ross Sea region (2024)
    PANGAEA
    Details
    Publication Date: 2024-02-19
    Description: Here we present physico-chemical data collected during two research cruises conducted to and across the Ross Sea, Antarctica in the summer of 2018 (February-March) and 2019 (January-February). The dataset includes measurements of temperature, salinity, oxygen, par and transmissivity obtained with a Sea-Bird Electronics (SBE) 911plus CTD. The CTD sensor was configured with SBE 3plus, SBE 4, and SBE 43 dual sensors for the parameters above, in addition to a seapoint fluorescence sensor, and a photosynthetically active radiation (PAR) sensor (Biospherical Instruments QCP‐2300L‐HP). These data were used to provide oceanographic context to DNA metabarcoding analysis of 18S rRNA V4 region that was carried out on DNA samples collected in parallel to nutrient and chlorophyll-a samples. Fastq samples from DNA metabarcoding analysis and the associated metadata (including nutrients, Chlorophyll-a, and size-fractionated chlorophyll-a) were deposited to GenBank under project numbers PRJNA756172 (2018 cruise) and PRJNA974160 (2019 cruise). The study resulting from this analysis has been submitted to Limnology and Oceanography.
    Keywords: 61TG20180205; 8911; Antarctica; Attenuation, optical beam transmission; CTD, Sea-Bird, SBE 911plus; CTD, Sea-Bird, SBE 911plus; measured with conductivity sensor, SEA-BIRD SBE 4; CTD, Sea-Bird, SBE 911plus; measured with Dissolved oxygen sensor, Sea-Bird, SBE 43; CTD, Sea-Bird, SBE 911plus; measured with PAR sensor, Biospherical Instruments Inc., QCP‐2300L‐HP; CTD, Sea-Bird, SBE 911plus; measured with temperature sensor, SEA-BIRD SBE 3Plus; DATE/TIME; DEPTH, water; diatoms; Dinoflagellates; ELEVATION; Event label; Fluorescence; LATITUDE; LONGITUDE; Name; Oxygen; Phaeocystis antarctica; Phytoplankton; Radiation, photosynthetically active; Ross Sea; Salinity; Sample method; seasonality; Station label; TAN1802_U8911; TAN1802_U8912; TAN1802_U8913; TAN1802_U8914; TAN1802_U8915; TAN1802_U8916; TAN1802_U8917; TAN1802_U8918; TAN1802_U8919; TAN1802_U8920; TAN1802_U8921; TAN1802_U8922; TAN1802_U8923; TAN1802_U8924; TAN1802_U8925; TAN1802_U8926; TAN1802_U8927; TAN1802_U8928; TAN1802_U8929; TAN1802_U8930; TAN1802_U8931; TAN1802_U8932; TAN1802_U8933; TAN1802_U8934; TAN1802_U8935; TAN1802_U8936; TAN1802_U8937; TAN1802_U8938; TAN1802_U8939; TAN1802_U8940; TAN1802_U8941; TAN1802_U8942; TAN1802_U8943; TAN1802_U8944; TAN1802_U8945; TAN1802_U8946; TAN1802_U8947; TAN1802_U8948; TAN1802_U8949; TAN1802_U8950; TAN1802_U8951; TAN1802_U8952; TAN1802_U8953; TAN1802_U8954; TAN1802_U8955; TAN1802_U8956; TAN1802, TAN1802_CTD; TAN1901; TAN1901_U9201; TAN1901_U9202; TAN1901_U9203; TAN1901_U9204; TAN1901_U9205; TAN1901_U9206; TAN1901_U9207; TAN1901_U9208; TAN1901_U9209; TAN1901_U9210; TAN1901_U9211; TAN1901_U9212; TAN1901_U9213; TAN1901_U9214; TAN1901_U9215; TAN1901_U9216; TAN1901_U9217; TAN1901_U9218; TAN1901_U9219; TAN1901_U9220; TAN1901_U9221; TAN1901_U9222; TAN1901_U9223; TAN1901_U9224; TAN1901_U9225; TAN1901_U9226; TAN1901_U9227; TAN1901_U9228; TAN1901_U9229; TAN1901_U9230; TAN1901_U9231; TAN1901_U9232; TAN1901_U9233; TAN1901CTD; Tangaroa; Temperature, water
    Type: Dataset
    Format: text/tab-separated-values, 488789 data points
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  • 2
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    Phytoplankton taxon-specific growth and microzooplankton grazing rates in subantarctic HNLC waters on and off Campbell Plateau southeast of New Zealand during austral autumn (2023)
    PANGAEA
    Details
    Publication Date: 2024-01-15
    Description: Here we present data of phytoplankton pigment and flow cytometry (FCM) data in the water column (CTD_HPLC_FCM_May2022.xlsx) and dilution grazing experiments (DILEX_HPLC_FCM_Conc_May2022.xlsx), and derived apparent growth rates for specific pigment markers and picophytoplankton groups assessed by FCM (APPARENT_GROWTHRATES_May2022.xlsx). Samples and experiments were collected and carried out in subantarctic waters across the Campbell Plateau region southeast of New Zealand. We distinguish between a subset of 'Experimental' stations (n = 8), where serial dilution experiments were conducted and a subset of additional 'Biomass' stations (n = 7), where depth-resolved physico-chemical and biological measurements (e.g., nutrients, size-fractionated chlorophyll a (SF-Chla), optical microscopy, FCM and HPLC) were also undertaken throughout the euphotic zone. 'Experimental' stations were used to characterize phytoplankton group-specific growth and grazing rates and associated carbon production and microzooplankton consumption dynamics in surface-mixed layer waters (10 m) On-plateau (n = 5) and Off-plateau (n = 3) with 'Biomass' stations providing a broader context of the environmental conditions and phytoplankton biomass and taxonomic composition across the region.
    Keywords: diatoms; Ecumenical hypothesis; HNLC subantarctic; Microzooplankton grazing; Phytoplankton growth; prasinophytes
    Type: Dataset
    Format: application/zip, 3 datasets
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  • 3
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    High-pressure liquid chromatography (HPLC) pigment concentration data and flow-cytometry picophytoplankton abundance and fluorescence data from depth-resolved CTD profiles at 'Biomass stations' during RV Tangaroa expedition TAN1702 (2023)
    PANGAEA
    Details
    Publication Date: 2024-01-15
    Description: Here we present data of phytoplankton pigment and flow cytometry (FCM) depth-resolved data collected from the water column (0-100 m) during TAN1702 voyage (March-April 2017) in subantarctic waters across the Campbell Plateau region southeast of New Zealand on board of the RV Tangaroa.
    Keywords: 19-Butanoyloxyfucoxanthin; 19-Hexanoyloxyfucoxanthin; 8811; 8813; 8815; 8819; 8821; 8824; 8825; 8827; 8828; 8830; 8836; 8844; 8847; 8853; 8856; Alloxanthin; Campbell Plateau; Campbell Plateau Physical Oceanography; Cast number; Chlorophyll b; Chlorophyll c2 monogalactosyldiacylglyceride ester (14:0/14:0); Chlorophyll c2 monogalactosyldiacylglyceride ester (18:4/14:0); CTD/Rosette; CTD-RO; Date/Time local; DEPTH, water; Diadinoxanthin; diatoms; Divinyl chlorophyll a; Divinyl chlorophyll a + Monovinyl chlorophyll a; Ecumenical hypothesis; Event label; Flow cytometry; Fucoxanthin; High Performance Liquid Chromatography (HPLC); HNLC subantarctic; Latitude of event; Longitude of event; Microzooplankton grazing; Monovinyl chlorophyll a; Neoxanthin; Ocean and sea region; Peridinin; Phytoplankton, pico eukaryotic; Phytoplankton growth; prasinophytes; Prasinoxanthin; Site; TAN1702; TAN1702_12M; TAN1702_17; TAN1702_20; TAN1702_21; TAN1702_28; TAN1702_31; TAN1702_34; TAN1702_40; TAN1702_41; TAN1702_43; TAN1702_44; TAN1702_47; TAN1702_49; TAN1702_54; TAN1702_56; Tangaroa; Type; Violaxanthin; Zeaxanthin
    Type: Dataset
    Format: text/tab-separated-values, 826 data points
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  • 4
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    High-pressure liquid chromatography (HPLC) pigment concentration data and flow-cytometry picophytoplankton abundance and fluorescence data from serial dilution experiments conducted with surface mixed-layer water in 'Experimental stations' during TAN1702 (2023)
    PANGAEA
    Details
    Publication Date: 2024-01-15
    Description: Here we present data of phytoplankton pigment and flow cytometry (FCM) data from initial (T0) and final (T24) samples obtained from serial dilution grazing experiments set up with surface mixed layer water from subantarctic waters across the Campbell Plateau region southeast of New Zealand. Experiments were incubated onboard of the RV Tangaroa using deck flow-through incubators simulating in situ light and temperature conditions.
    Keywords: 19-Butanoyloxyfucoxanthin; 19-Hexanoyloxyfucoxanthin; 8813; 8819; 8824; 8827; 8830; 8834; 8844; 8853; Alloxanthin; Bottle number; Campbell Plateau; Campbell Plateau Physical Oceanography; Cast number; Chlorophyll b; Chlorophyll c2 monogalactosyldiacylglyceride ester (14:0/14:0); Chlorophyll c2 monogalactosyldiacylglyceride ester (18:4/14:0); Comment; CTD/Rosette; CTD-RO; Date/Time local; DEPTH, water; Diadinoxanthin; diatoms; Dilution factor; Divinyl chlorophyll a; Divinyl chlorophyll a + Monovinyl chlorophyll a; Ecumenical hypothesis; Event label; Experiment duration; Flow cytometry; Fucoxanthin; High Performance Liquid Chromatography (HPLC); HNLC subantarctic; Latitude of event; Longitude of event; Microzooplankton grazing; Monovinyl chlorophyll a; Neoxanthin; Peridinin; Phytoplankton, pico eukaryotic; Phytoplankton growth; prasinophytes; Prasinoxanthin; Quality control; Sample ID; Site; TAN1702; TAN1702_12; TAN1702_17; TAN1702_21; TAN1702_28; TAN1702_41; TAN1702_44; TAN1702_49; TAN1702_54; Tangaroa; Treatment: nutrients; Type of study; Violaxanthin; Water volume, filtered; Zeaxanthin
    Type: Dataset
    Format: text/tab-separated-values, 3043 data points
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  • 5
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    Apparent growth rates estimated in each incubation bottle of dilution experiments and photoacclimation correction index (Phi) assessed from changes in cell fluorescence measured by flow-cytometry during 24-h dilution experiments during during TAN1702 (2023)
    PANGAEA
    Details
    Publication Date: 2024-01-15
    Description: Here we present taxon-specific apparent growth rate data obtained from high-pressure liquid chromatography (HPLC) pigment and flow cytometry (FCM) analisis of initial (T0) and final (T24) samples in serial dilution grazing experiments conducted with surface mixed layer water from subantarctic waters across the Campbell Plateau region southeast of New Zealand.
    Keywords: 19-Butanoyloxyfucoxanthin, apparent growth rate; 19-Butanoyloxyfucoxanthin, apparent growth rate, corrected; 19-Hexanoyloxyfucoxanthin, apparent growth rate; 19-Hexanoyloxyfucoxanthin, apparent growth rate, corrected; 8813; 8819; 8824; 8827; 8830; 8836; 8844; 8853; Alloxanthin, apparent growth rate; Alloxanthin, apparent growth rate, corrected; Calculated according to Gutiérrez‐Rodríguez et al. (2020); Campbell Plateau; Campbell Plateau Physical Oceanography; Cast number; Chlorophyll, total, apparent growth rate; Chlorophyll, total, apparent growth rate, corrected; Chlorophyll b, apparent growth rate; Chlorophyll b, apparent growth rate, corrected; CTD/Rosette; CTD-RO; Date/Time of event; diatoms; Dilution factor; Ecumenical hypothesis; Elevation of event; Estimated from changes in cell abundance or pigment concentrations; Estimated from changes in cell abundance or pigment concentrations and corrected for photoacclimation; Event label; Experiment duration; Fucoxanthin, apparent growth rate; Fucoxanthin, apparent growth rate, corrected; HNLC subantarctic; Latitude of event; Longitude of event; Microzooplankton grazing; Peridinin, apparent growth rate; Peridinin, apparent growth rate, corrected; Photoacclimation index; Phytoplankton, pico eukaryotic; Phytoplankton growth; Picoeukaryotes, apparent growth rate; Picoeukaryotes, specific fluorescence/side scatter ratio; prasinophytes; Prasinoxanthin, apparent growth rate; Prasinoxanthin, apparent growth rate, corrected; Site; Synechococcus, apparent growth rate; TAN1702; TAN1702_12M; TAN1702_17; TAN1702_21; TAN1702_28; TAN1702_41; TAN1702_44; TAN1702_49; TAN1702_54; Tangaroa
    Type: Dataset
    Format: text/tab-separated-values, 3266 data points
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  • 6
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    Chlorophyll a distribution and size structure across contrasting water masses of the southwest Pacific Ocean (2021)
    PANGAEA
    Details
    Publication Date: 2024-05-03
    Description: Here we present physico-chemical and biological data collected during 12 research cruises conducted in SW Pacific waters east of Aotearoa New Zealand between 2009 and 2017. Nutrient and chla samples were collected mainly with Niskin bottles deployed with a Seabird 9plus CTD rosette. A small fraction of the data presented were sampled also from manually deployed Niskin bottles and the RV Tangaroa Underway Flow-Through System (TUFTS) system equipped with temperature, salinity and fluorescence sensors. The dataset includes measurements of temperature, salinity, oxygen and transmissivity obtained with a Seabird 9plus; inorganic nutrients (dissolved reactive phosphorus, dissolved reactive silica, nitrate + nitrite); total chlorophyll a (chla) filtered onto GFF filter, size fractionated chla (0.2, 2, 20 microns) obtained by sequential filtration of seawater through 20, 2 and 0.2 micron polycarbonate filters; and derived mixed-layer depth estimated following temperature and density criteria. The depth of the euphotic zone included was calculated from chla concentration following the approach described in Maritorena and Morel, 2001 (doi:10.1029/2000jc000319). These data were used to provide oceanographic context to DNA metabarcoding analysis of 18S rRNA V4 region that was carried out on DNA samples collected in parallel to nutrient and chla samples. The study resulting from this analysis has been submitted to Progress in Oceanography.
    Keywords: 5806; 5809; 5819; 5829; 5833; 61TG20151203; 61TG20160509; 61TG20180205; 6372; 6377; 6380; 6410; 6421; 6425; 6431; 6433; 6623; 6624; 6626; 6633; 6636; 6637; 6638; 6854; 6855; 6857; 6861; 6877; 6878; 6879; 7407; 7408; 7419; 7421; 7504; 7509; 7517; 7525; 7526; 7533; 7545; 7546; 7557; 7558; 7562; 7756; 7757; 7758; 7759; 7765; 7769; 7770; 7771; 7773; 7774; 7776; 7777; 7805; 7815; 7818; 7824; 7839; 7841; 7855; 7858; 7878; 7879; 8531; 8560; 8561; 8565; 8569; 8589; 8650; 8660; 8805; 8811; 8815; 8824; 8828; 8837; 8838; 8839; 8840; 8841; 8842; 8847; 8856; 8911; Attenuation coefficient; Bay of Plenty; Bottle, Niskin; Bounty Trough; Calculated after Maritorena and Morel, 2001; Campbell Plateau Physical Oceanography; Cast number; Chatham Rise; Chlorophyll a; Cruise/expedition; CTD, Sea-Bird, SBE 911plus; CTD, Seabird 19plus; CTD, SEA-BIRD SBE 9 plus; CTD/Rosette; CTD-RO; Date/Time of event; DEPTH, water; Depth of the euphotic zone; Elevation of event; Estimated; Event label; Filtration; Fluorescence; KAH1303; KAH1303_U7756; KAH1303_U7757; KAH1303_U7758; KAH1303_U7759; KAH1303_U7765; KAH1303_U7769; KAH1303_U7770; KAH1303_U7771; KAH1303_U7773; KAH1303_U7774; KAH1303_U7776; KAH1303_U7777; Kaharoa; Latitude of event; Longitude of event; Mixed layer depth; mixed-layer depth; New Zealand EEZ; New Zealand northeast shelf-slope; NIS; Nitrate; nutrients; Ocean and sea region; Oxygen; Phosphorus, reactive; Phytoplankton; Project; Salinity; Sample ID; Sample method; Sampling date; Silicate, reactive; Site; Size-fractionated chl a; SOAP (Surface Ocean Aerosol Production); Southwest Pacific; Spring Bloom II; TAN0902; TAN0902_U5806; TAN0902_U5809; TAN0902_U5819; TAN0902_U5829; TAN0902_U5833; TAN0909; TAN0909_U6372; TAN0909_U6377; TAN0909_U6380; TAN0909_U6410; TAN0909_U6421; TAN0909_U6425; TAN0909_U6431; TAN0909_U6433; TAN1006; TAN1006_U6623; TAN1006_U6624; TAN1006_U6626; TAN1006_U6633; TAN1006_U6636; TAN1006_U6637; TAN1006_U6638; TAN1103; TAN1103_U6854; TAN1103_U6855; TAN1103_U6857; TAN1103_U6861; TAN1103_U6877; TAN1103_U6878; TAN1103_U6879; TAN1113; TAN1113_U7407; TAN1113_U7408; TAN1113_U7419; TAN1113_U7421; TAN1203; TAN1204; TAN1204_U7545; TAN1204_U7546; TAN1204_U7557; TAN1204_U7558; TAN1204_U7562; TAN1212; TAN1212_SIS1; TAN1212_SIS2; TAN1212_SIS3; TAN1212_SIS4; TAN1212_SIS5; TAN1212_SIS6; TAN1212_SIS7; TAN1212_U7805; TAN1212_U7815; TAN1212_U7818; TAN1212_U7824; TAN1212_U7839; TAN1212_U7841; TAN1212_U7855; TAN1212_U7858; TAN1212_U7878; TAN1212_U7879; TAN1516; TAN1516_C10; TAN1516_C4; TAN1516_C6; TAN1516_C7; TAN1516_C8; TAN1516_C9; TAN1516_F1; TAN1516_F2; TAN1516_F3; TAN1516_S10; TAN1516_S15; TAN1516_S18; TAN1516_S22; TAN1516_S5; TAN1516_S9; TAN1604; TAN1604_U8531; TAN1604_U8560; TAN1604_U8561; TAN1604_U8565; TAN1604_U8569; TAN1604_U8589; TAN1604_U8650; TAN1604_U8660; TAN1702; TAN1702_10; TAN1702_11-2; TAN1702_17Jo; TAN1702_20; TAN1702_31; TAN1702_34; TAN1702_40; TAN1702_44; TAN1702_56; TAN1702_62; TAN1702_7; TAN1702_8; TAN1702_9; TAN1802_U8911; TAN1802, TAN1802_CTD; Tangaroa; Temperature, water; Temperature, water, potential; Transmissivity; U7504; U7505; U7508; U7509; U7517; U7518; U7525; U7526; U7533; Water mass
    Type: Dataset
    Format: text/tab-separated-values, 11227 data points
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  • 7
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    Yuendumu, legacy of a longitudinal growth study in Central Australia (2021)
    University of Adelaide Press
    Details
    Publication Date: 2024-03-29
    Description: his book provides a comprehensive account of a unique pioneering longitudinal study of human growth that continues to contribute to our knowledge and raise new questions 60 years after it commenced. Although over 200 scientific publications have arisen from the study, this book describes, in a single volume, the key researchers involved, the Australian Aboriginal people from Yuendumu who participated in the study, and the main outcomes. The findings have provided new insights into how teeth function, as well as factors affecting oral health and physical growth. General readers, as well as students and researchers, will find much of interest in this volume.
    Keywords: children ; aboriginal australians ; northern territory ; social life and customs ; longitudinal studies ; aborigines health surveys ; dental surveys ; health and hygiene ; yuendumu ; Adelaide ; Mandible ; Molar (tooth) ; Occlusion (dentistry) ; Warlpiri language ; bic Book Industry Communication::J Society & social sciences::JH Sociology & anthropology::JHM Anthropology ; bic Book Industry Communication::M Medicine::MM Other branches of medicine::MMD Dentistry ; thema EDItEUR::J Society and Social Sciences::JH Sociology and anthropology::JHM Anthropology ; thema EDItEUR::M Medicine and Nursing::MK Medical specialties, branches of medicine::MKE Dentistry
    Language: English
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  • 8
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    Twin Studies: Research in Genes, Teeth and Faces (2021)
    University of Adelaide Press
    Details
    Publication Date: 2024-04-01
    Description: This volume is about an ongoing long-term research initiative led by researchers from the School of Dentistry at the University of Adelaide. The aim of this book is to provide an overview of the studies of the teeth and faces of Australian twins and their families that have extended over more than thirty years.
    Keywords: primary teeth ; longitudinal study ; history of twin research ; dental features ; oral health ; craniofacial biology ; epigenetic factors ; path analysis ; permanent teeth ; next-generation sequencing ; twins ; dentition ; fraternal twins ; monozygotic ; melbourne dental schoolcentre for orio-facial research and learning ; teeth ; dental morphology ; dental ; dizygotic ; mirror imaging ; twin zygosity ; twin studies ; adelaide dental school ; genetic expression ; sexual dimorphism ; genetic factors ; identical twins ; model-fitting ; heritability ; Human tooth development ; Molar (tooth) ; Tooth decay ; thema EDItEUR::M Medicine and Nursing::MK Medical specialties, branches of medicine::MKE Dentistry ; thema EDItEUR::P Mathematics and Science::PS Biology, life sciences::PSX Human biology ; thema EDItEUR::J Society and Social Sciences::JH Sociology and anthropology::JHM Anthropology
    Language: English
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  • 9
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    Isoscape Models of the Southern Ocean: Predicting Spatial and Temporal Variability in Carbon and Nitrogen Isotope Compositions of Particulate Organic Matter (2021)
    AGU (American Geophysical Union) | Wiley
    Details
    Publication Date: 2024-02-14
    Description: Polar marine ecosystems are particularly vulnerable to the effects of climate change. Warming temperatures, freshening seawater, and disruption to sea-ice formation potentially all have cascading effects on food webs. New approaches are needed to better understand spatiotemporal interactions among biogeochemical processes at the base of Southern Ocean food webs. In marine systems, isoscapes (models of the spatial variation in the stable isotopic composition) of carbon and nitrogen have proven useful in identifying spatial variation in a range of biogeochemical processes, such as nutrient utilization by phytoplankton. Isoscapes provide a baseline for interpreting stable isotope compositions of higher trophic level animals in movement, migration, and diet research. Here, we produce carbon and nitrogen isoscapes across the entire Southern Ocean (〉40°S) using surface particulate organic matter isotope data, collected over the past 50 years. We use Integrated Nested Laplace Approximation-based approaches to predict mean annual isoscapes and four seasonal isoscapes using a suite of environmental data as predictor variables. Clear spatial gradients in δ13C and δ15N values were predicted across the Southern Ocean, consistent with previous statistical and mechanistic views of isotopic variability in this region. We identify strong seasonal variability in both carbon and nitrogen isoscapes, with key implications for the use of static or annual average isoscape baselines in animal studies attempting to document seasonal migratory or foraging behaviors.
    Type: Article , PeerReviewed , info:eu-repo/semantics/article
    Format: text
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  • 10
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    Presence-only habitat suitability models for vulnerable marine ecosystem indicator taxa in the South Pacific have reached their predictive limit (2021)
    Oxford University Press
    Details
    Publication Date: 2021-08-19
    Description: Vulnerable marine ecosystems (VMEs) are typically fragile and slow to recover, making them likely to be substantially altered by disturbance. In the High Seas, regional fishery management organizations (RFMOs) are required to implement measures to prevent significant adverse impacts on VMEs. The objectives of the present study were to: update distribution models of VME indicator taxa in the South Pacific RFMO Convention Area; evaluate these against newly-collated independent field data to test the reliability of the presence-only habitat suitability models; and assess how well the updated models were able to predict into unsampled space. Ensemble habitat suitability models of 10 VME indicator taxa performed well using the newly collated data (AUC 〉 0.95, TSS 〉 0.76, and RMSE  0.93, TSS 〉 0.71, and RMSE
    Print ISSN: 1054-3139
    Electronic ISSN: 1095-9289
    Topics: Biology , Geosciences , Physics
    Published by Oxford University Press on behalf of International Council for the Exploration of the Sea.
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    PAPER CURRENT
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