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  • 1
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    Final Evaluation Memorandum: Strategies for Resolving Low Dissolved Oxygen and Methylmercury Events in Northern Suisun Marsh (2021)
    State Water Resources Control Board | Sacramento, CA
    In:  stuart@swampthing.org | http://aquaticcommons.org/id/eprint/6470 | 393 | 2020-08-24 04:45:31 | 6470 | Bachand & Associates
    Details
    Publication Date: 2021-07-14
    Description: The purpose of the project is to improve our understanding about best management practices that can be utilized on diked managed wetlands in Suisun Marsh for reducing the occurrence of low dissolved oxygen (DO) and high methylmercury (MeHg) events associated primarily with fall flood-up practices. Low DO events are of concern because they can lead to undue stress and even mortality of sensitive aquatic organisms. Elevated MeHg levels are of concern because MeHg is a neurotoxin that bio-magnifies up the food chain and can cause deleterious effects to higher trophic level consumers such as piscivorous fish, birds, and mammals (including humans). This study involved two years (2007-2008) of intensive field data collection at two managed wetland sites in northwest Suisun Marsh and their surrounding tidal sloughs, an area with prior documented low DO events. In addition, the study collected limited soils and water quality field data and mapped vegetation for three managed wetland sites in the central interior of Suisun Marsh, for the purpose of examining whether wetlands at other locations exhibit characteristics that could indicate potential for similar concerns. In Year 1 of the study, the objective was to identify the baseline conditions in the managed wetlands and determine which physical management conditions could be modified for Year 2 to reduce low DO and MeHg production issues most effectively. The objective of Year 2 was to evaluate the effectiveness of these modified management actions at reducing production of low DO and elevated MeHg conditions within the managed wetlands and to continue improving understanding of the underlying biogeochemical processes at play. This Final Evaluation Memorandum examined a total of 19 BMPs, 14 involving modified water management operations and the remaining five involving modified soil and vegetation management practices. Some of these BMPs were previously employed and others have not yet been tested. For each BMP this report assesses its efficacy in improving water quality conditions and potential conflicts with wetland management. It makes recommendations for further study (either feasibility assessments or field testing) and whether to consider for future use. Certain previously used BMPs were found to be important contributors to poor water quality conditions and their continued use is not recommended. Some BMPs that could improve water quality conditions appear difficult to implement in regards to compatibility with wetland management; these BMPs require further elaboration and feasibility assessment to determine whether they should be field tested. In practice for any given wetland, there is likely a combination of BMPs that would together have the greatest potential to address the low DO and high MeHg water quality concerns. Consequently, this report makes no sweeping recommendations applicable to large groups of wetlands but instead promotes a careful consideration of factors at each wetland or small groups of wetlands and from that assessment to apply the most effective suite of BMPs.This report also identifies a number of recommended future actions and studies. These recommendations are geared toward improving the process understanding of factors that promote low DO and high MeHg conditions, the extent of these problems in Suisun Marsh, the regulatory basis for the DO standards for a large estuarine marsh, the economics of BMPs, and alternative approaches to BMPs on diked managed wetlands that may address the water quality issues. The most important of these recommendations is that future BMP implementation should be carried out within the context of rigorous scientific evaluation so as to gain the maximum improvement in how to manage these water quality issues in the diked managed wetlands of Suisun Marsh.
    Description: State Water Resources Control Board
    Description: Project Number 06-283-552-0
    Keywords: Agriculture ; Chemistry ; Engineering ; Environment ; Fisheries ; Management ; Pollution ; BMPs ; dissolved oxygen ; mercury ; Suisun Marsh ; managed wetlands ; best management practices ; methyl mercury ; hydrology ; tidal water quality ; Wetlands and Water Resources ; Bachand and Associates ; Suisun Resource Conservation District ; California Department of Fish and Game ; California Department of Water Resources ; University of California Davis ; U.S. Geological Survey
    Repository Name: AquaDocs
    Type: monograph
    Format: application/pdf
    Format: application/pdf
    Format: 353
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  • 2
    Electronic Resource
    Electronic Resource
    (E,Z) Equilibria, 14. Substituent-Induced Chemical Shifts along the C = N Bond of Schiff Bases (1992)
    Weinheim : Wiley-Blackwell
    Berichte der deutschen chemischen Gesellschaft 125 (1992), S. 2033-2040 
    Details
    ISSN: 0009-2940
    Keywords: 13C NMR, SCS ; Substituent effects ; Imines ; Isomerization, (E,Z) Schiff bases ; Chemistry ; Inorganic Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Sterically congested N-(1,1,3,3-tetraalkyl-2-indanylidene)-amines 8-11, N-(cyclopentylidene)anilines 13-17, and two of their salts are described, together with a short synthesis of 2-imino-1,1,3,3-tetramethylindan (5). Some of these imines show rapid (E,Z) equilibration. Positively and negatively charged nitrogen functions (in 6 and 7) cause opposite 1H- and 13C-NMR chemical shift effects along the C = N bond. Chemical shifts are almost equally affected by the lone electron pair and by the imino N-H bond. Substituent-induced chemical shifts (SCS) have been assigned for all syn and anti positions with respect to methyl, phenyl, and 2,6-dimethylphenyl groups at the imino nitrogen atom. The structurally well-defined, rigid imines recommend themselves as new models for the calibration of theoretical approaches to syn/anti-differentiating SCS.
    Additional Material: 3 Tab.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/cber.19921250911
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  • 3
    Electronic Resource
    Electronic Resource
    (E, Z)1-Equilibria, 17 Demonstration of the Nitrogen Inversion Mechanism of Imines in a Schiff Base ModelDedicated to Professor Heinrich Nöth on the occasion of his 65th birthday. (1993)
    Weinheim : Wiley-Blackwell
    Berichte der deutschen chemischen Gesellschaft 126 (1993), S. 747-754 
    Details
    ISSN: 0009-2940
    Keywords: Diastereotopomerization, (E, Z) ; Imines ; Inversion, nitrogen ; Permethylation ; Chemistry ; Inorganic Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Experimental differentiation between pure C=N double bond rotation and nitrogen inversion in N1-arylimines is possible with a single compound (13b) under the proviso of slow rotation about the N-aryl single bond. Labelling by 1H and 13C nuclei at the diastereotopic faces of the C=N moiety as well as of the N-aryl group is the clue to a successful stereodynamic analysis, as performed by variable-temperature NMR spectroscopy of 13b, a sterically congested and chiral model compound. Interpretation of similar measurements on a second model (13d) is less straightforward. The experimental observation of time-averaged Cs symmetry by NMR coalescences is only compatible with a mechanism of (E/Z) stereomutation either by pure inversion at sp2 nitrogen or by a contribution from C=N rotation together with a synchronized (geared) controtation about the N-aryl single bond. However, the latter combination is concluded to be predominantly inversion-like by comparisons with related imines.
    Additional Material: 1 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/cber.19931260327
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  • 4
    Electronic Resource
    Electronic Resource
    Darstellung und Eigenschaften neuer perhalogenierter 1,3-Dithietan-S-oxide (1983)
    Weinheim : Wiley-Blackwell
    Berichte der deutschen chemischen Gesellschaft 116 (1983), S. 1623-1630 
    Details
    ISSN: 0009-2940
    Keywords: Chemistry ; Inorganic Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Description / Table of Contents: Synthesis and Properties of New Perhalogenated 1,3-Dithietane S-OxidesNew perchlorinated and perfluorinated 1,3-dithietanes (4, 6, 7, 12, 14, 15), which are partially oxidized at the sulfur atoms, are described. Pyrolysis of the 1,3-dioxides 7 and 15 leads to the sulfoxides 8 and 16, X2C = S = O (X = Cl, F). respectively. Two new oxidizing agents are used: trifluoromethane- and nonafluorobutanepersulfonic acid.
    Notes: Die neuen perchlorierten und perfluorierten, am Schwefel partiell oxidierten 1,3-Dithietane 4, 6, 7, 12, 14 und 15 werden beschrieben. Pyrolysen der 1,3-Dioxide 7 und 15 führen zu den Sulfoxiden 8 bzw. 16, X2C = S = O (X = Cl, F). Zwei neue Oxidationsmittel werden angewendet: Trifluormethan- und Nonafluorbutanpersulfonsäure.
    Additional Material: 1 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/cber.19831160437
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  • 5
    Electronic Resource
    Electronic Resource
    Proline excretion by Escherichia coli K12A preliminary report of this research was made at the Fourth International Symposium on the Genetics of Industrial Microoganisms in Kyoto, Japan, June, 1982. (1984)
    New York, NY [u.a.] : Wiley-Blackwell
    Biotechnology and Bioengineering 26 (1984), S. 74-80 
    Details
    ISSN: 0006-3592
    Keywords: Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: Proline excretion from proline overproducing strains of E. coli K12 has been studied as a model chemical production system. We have isolated proline overproducing mutants of E. coli and have shown that uncontrolled synthesis is not sufficient to cause excretion of this amino acid. An episomal mutation causing proline over production has been introduced into a series of otherwise isogenic strains that bear well defined, chromosomal lesions affecting the active uptake and catabolism of L-proline. A syntropism test reveals that L-proline is excreted by overproducing strains only if transport and/or catabolism are impaired. Dansyl derivatization and chromatographic analysis of culture supernatants shows that proline is the only amino acid excreted. Batch cultures of an excreting strain in an amino acid production medium yield culture supernatants containing 1 g proline/L, whereas no proline is detectable in supernatants derived from cultures of an overproducing strain with normal transport and catabolic activities. These data reveal that genetic lesions eliminating active uptake can be used to specifically enhance metabolite excretion.
    Additional Material: 1 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/bit.260260114
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  • 6
    Electronic Resource
    Electronic Resource
    Proline excretion by Escherichia coli K12 (1984)
    New York, NY [u.a.] : Wiley-Blackwell
    Biotechnology and Bioengineering 26 (1984), S. 1140-1140 
    Details
    ISSN: 0006-3592
    Keywords: Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Process Engineering, Biotechnology, Nutrition Technology
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/bit.260260924
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  • 7
    Electronic Resource
    Electronic Resource
    Expression of recombinant protein A from the lac promoter in Escherichia coli JM83 is not subject to catabolite repression when grown under specific conditions of continuous culture (1991)
    New York, NY [u.a.] : Wiley-Blackwell
    Biotechnology and Bioengineering 38 (1991), S. 1050-1058 
    Details
    ISSN: 0006-3592
    Keywords: catabolite repression ; protein A ; membrane proteins ; continuous culture ; protein expression ; Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: Although widely used in experimental and industrial situations, genetically engineered plasmids containing the lac promoter from Escherichia coli are subject to catabolite repression when grown in glucose-containing media. Several methods of overcoming this problem have been investigated by studying the expression of the protein A gene from Staphylococcus aureus under the control of the Escherichia coli lac promoter. When glycerol is used as a sole carbon source, the plasmid is unstable and is rapidly lost from the culture. When the bacteria are grown in chemostats under glucose limitation, the plasmid is maintained, even at high dilution rates, and the expression of protein A is similar to that observed when glycerol was used. The balance between metabolic load and protein A expression seems to be maintained by reducing the gene dose to a tolerable level. Depending on the metabolic conditions prevailing in the culture, this is achieved, either by reducing the copy number of the plasmid or in extreme cases by removing the plasmid altogether.
    Additional Material: 10 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/bit.260380914
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  • 8
    Electronic Resource
    Electronic Resource
    Monoclonal antibodies to feline sarcoma virus gag and fes gene translational products (1983)
    New York, N.Y. : Wiley-Blackwell
    Journal of Cellular Biochemistry 21 (1983), S. 9-18 
    Details
    ISSN: 0730-2312
    Keywords: feline sarcoma virus proteins ; v-fes ; v-fms ; tyrosine ; monoclonal antibodies ; tyrosine phosphorylation ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Chemistry and Pharmacology , Medicine
    Notes: A series of hybridomas have been isolated which produce monoclonal antibodies directed against polyprotein gene products of the Gardner, Snyder-Theilen, and McDonough strains of FeSV. Within these are representatives of several immunoglobulin classes including IgG1, IgG2a, IgG2b, IgG2c, and IgM. Antibody produced by one hybridoma recognizes immunologic determinants localized within an FeLV gag gene structural component (p15) common to polyproteins encoded by all three FeSV isolates whereas antibody produced by a second is specific for p30 determinants unique to P170gag-fms. Additional hybridomas secrete antibody directed against v-fes-encoded determinants common to the Gardner and Snyder-Theilen FeSV-encoded polyproteins. GA P110gag-fes and ST P85gag-fes immunoprecipitated by antibody directed against p15 exhibit tyrosine-specific protein kinase activity but lack such activity when precipitated by antibody specific for their acquired sequence (v-fes) components.
    Additional Material: 5 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/jcb.240210103
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  • 9
    Electronic Resource
    Electronic Resource
    The human c-abl oncogene in the philadelphia translocation (1984)
    New York, NY [u.a.] : Wiley-Blackwell
    Journal of Cellular Physiology 121 (1984), S. 179-191 
    Details
    ISSN: 0021-9541
    Keywords: Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Medicine
    Additional Material: 8 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/jcp.1041210421
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  • 10
    Electronic Resource
    Electronic Resource
    Morphological and ultrastructural characterization of mammalian spermatozoa processed for flow cytometric DNA analyses (1984)
    New York, NY : Wiley-Blackwell
    Gamete Research 10 (1984), S. 339-351 
    Details
    ISSN: 0148-7280
    Keywords: spermatozoa ; flow cytometry ; DNA staining ; nuclear morphology ; ultrastructure ; mammals ; Life and Medical Sciences ; Cell & Developmental Biology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology
    Notes: The morphological and ultrastructural changes that occur during preparation of porcine, bovine, and murine spermatozoa for flow cytometric quantification of the relative DNA content of the X- and Y-chromosome-bearing sperm populations were examined. Ejaculated spermatozoa from the boar and bull were washed using a series of dimethyl sulfoxide (DMSO) solutions prior to fixation, whereas the epididymal mouse spermatozoa were washed only in phosphate-buffered saline (PBS). Spermatozoa from all three species were then fixed in ethanol and processed for fluorochrome staining by a treatment regimen consisting of sulfhydryl reduction and proteolysis. The processed sperm nuclei were stained for DNA with the fluorochrome, 4′-6-diamidino-2-phenylindole (DAPI) before quantification by flow cytometry. Scanning and transmission electron micrographs of sperm heads taken at various steps of the preparation and staining procedures show 1) that the rigorous washing procedure disrupted the plasma and outer acrosomal membranes, 2) that ethanol fixation resulted in removal of the outer membranes and disintegration of the nuclear envelope, and 3) that thiol and proteolysis treatment removed the remaining cellular organelles including the tail and rapidly induced partial decondensation of the tightly packed chromatin. Sequential micrographs showed that the nuclear matrix of all three species increased in thickness about twofold during the preparation and staining. Consequently, the harsh procedures currently used for quantitative staining of DNA for high-resolution flow cytometric analyses destroy most cellular organelles and thereby prevent simultaneous characterization of DNA content and other sperm cell constituents.
    Additional Material: 6 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/mrd.1120100402
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