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  • 1
    Publication Date: 2014-05-03
    Description: PINK1 (PTEN induced putative kinase 1) and PARKIN (also known as PARK2) have been identified as the causal genes responsible for hereditary recessive early-onset Parkinsonism. PINK1 is a Ser/Thr kinase that specifically accumulates on depolarized mitochondria, whereas parkin is an E3 ubiquitin ligase that catalyses ubiquitin transfer to mitochondrial substrates. PINK1 acts as an upstream factor for parkin and is essential both for the activation of latent E3 parkin activity and for recruiting parkin onto depolarized mitochondria. Recently, mechanistic insights into mitochondrial quality control mediated by PINK1 and parkin have been revealed, and PINK1-dependent phosphorylation of parkin has been reported. However, the requirement of PINK1 for parkin activation was not bypassed by phosphomimetic parkin mutation, and how PINK1 accelerates the E3 activity of parkin on damaged mitochondria is still obscure. Here we report that ubiquitin is the genuine substrate of PINK1. PINK1 phosphorylated ubiquitin at Ser 65 both in vitro and in cells, and a Ser 65 phosphopeptide derived from endogenous ubiquitin was only detected in cells in the presence of PINK1 and following a decrease in mitochondrial membrane potential. Unexpectedly, phosphomimetic ubiquitin bypassed PINK1-dependent activation of a phosphomimetic parkin mutant in cells. Furthermore, phosphomimetic ubiquitin accelerates discharge of the thioester conjugate formed by UBCH7 (also known as UBE2L3) and ubiquitin (UBCH7 approximately ubiquitin) in the presence of parkin in vitro, indicating that it acts allosterically. The phosphorylation-dependent interaction between ubiquitin and parkin suggests that phosphorylated ubiquitin unlocks autoinhibition of the catalytic cysteine. Our results show that PINK1-dependent phosphorylation of both parkin and ubiquitin is sufficient for full activation of parkin E3 activity. These findings demonstrate that phosphorylated ubiquitin is a parkin activator.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Koyano, Fumika -- Okatsu, Kei -- Kosako, Hidetaka -- Tamura, Yasushi -- Go, Etsu -- Kimura, Mayumi -- Kimura, Yoko -- Tsuchiya, Hikaru -- Yoshihara, Hidehito -- Hirokawa, Takatsugu -- Endo, Toshiya -- Fon, Edward A -- Trempe, Jean-Francois -- Saeki, Yasushi -- Tanaka, Keiji -- Matsuda, Noriyuki -- Canadian Institutes of Health Research/Canada -- England -- Nature. 2014 Jun 5;510(7503):162-6. doi: 10.1038/nature13392. Epub 2014 Jun 4.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉1] Laboratory of Protein Metabolism, Tokyo Metropolitan Institute of Medical Science, Setagaya-ku, Tokyo 156-8506, Japan [2] Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Chiba 277-8561, Japan. ; Division of Cell Signaling, Fujii Memorial Institute of Medical Sciences, The University of Tokushima, Tokushima 770-8503, Japan. ; Research Center for Materials Science, Nagoya University, Nagoya, Aichi 464-8602, Japan. ; Laboratory of Protein Metabolism, Tokyo Metropolitan Institute of Medical Science, Setagaya-ku, Tokyo 156-8506, Japan. ; 1] Laboratory of Protein Metabolism, Tokyo Metropolitan Institute of Medical Science, Setagaya-ku, Tokyo 156-8506, Japan [2] Graduate School of Agriculture, Shizuoka University, 836 Ohya, Shizuoka 422-8529, Japan. ; Molecular Profiling Research Center for Drug Discovery, National Institute of Advanced Industrial Science and Technology, 2-4-7 Aomi, Koto-ku, Tokyo 135-0064, Japan. ; 1] JST-CREST/Department of Chemistry, Graduate School of Science, Nagoya University, Chikusa-ku, Nagoya 464-8602, Japan [2] JST-CREST/Faculty of Life Sciences, Kyoto Sangyo University, Kamigamo-motoyama, Kita-ku, Kyoto 603-8555, Japan. ; McGill Parkinson Program, Department of Neurology and Neurosurgery, Montreal Neurological Institute and Hospital, McGill University, Montreal, Quebec H3A 2B4, Canada. ; Department of Pharmacology & Therapeutics, McGill University, Montreal, Quebec H3G 1Y6, Canada. ; 1] Laboratory of Protein Metabolism, Tokyo Metropolitan Institute of Medical Science, Setagaya-ku, Tokyo 156-8506, Japan [2] Protein Metabolism Project, Tokyo Metropolitan Institute of Medical Science, Setagaya-ku, Tokyo 156-8506, Japan.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/24784582" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Enzyme Activation ; Fibroblasts ; HeLa Cells ; Humans ; Membrane Potential, Mitochondrial ; Mice ; Mitochondria/metabolism ; Mutation/genetics ; Parkinson Disease ; Phosphorylation ; Phosphoserine/metabolism ; Protein Kinases/*metabolism ; Ubiquitin/chemistry/*metabolism ; Ubiquitin-Protein Ligases/genetics/*metabolism ; Ubiquitination
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 2
    Electronic Resource
    Electronic Resource
    New York : Wiley-Blackwell
    Journal of Polymer Science: Polymer Chemistry Edition 21 (1983), S. 1535-1542 
    ISSN: 0360-6376
    Keywords: Physics ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Catalytic hydrolysis of enantiomeric substrates by N-decanoyl-L-histidine was studied at pH 7.30, 0.02M phosphate buffer, and 25°C in the presence of quaternized polymers. The rate of reaction is remarkably accelerated in the presence of polyethylenimine derivatives, but the observed stereoselectivity depends on the structure of the substrates.
    Additional Material: 4 Ill.
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  • 3
    Electronic Resource
    Electronic Resource
    New York : Wiley-Blackwell
    Journal of Polymer Science: Polymer Chemistry Edition 21 (1983), S. 2777-2785 
    ISSN: 0360-6376
    Keywords: Physics ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Polymers that contain crown ether moieties at the side chain and are capable of forming rather tough film were synthesized by the polymer reaction of poly(vinyl alcohol) with formyl derivatives of aliphatic crown ethers such as 12-crown-4, 15-crown-5, and 18-crown-6. In the passive transport of alkali metal picrates across the poly(crown ether) membranes the permeation, particularly of alkali metals which tend to form intramolecular sandwich-type complexes with the crown ether rings, was retarded, compared with a poly(vinyl alcohol) membrane. The cation selectivities in the permeation of poly(crown ether) membranes differed significantly from those of poly(vinyl alcohol).
    Additional Material: 4 Ill.
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  • 4
    ISSN: 0360-6376
    Keywords: Physics ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The catalytic activities of N-decanoyl-L-histidine and its methyl ester and of dipeptide derivatives containing an L-histidine residue toward the stereoselective hydrolysis of enantiomeric substrates have been studied at pH 7.30 (in 0.01M Bis-tris buffer) and 25°C in the presence of poly(ethyleneimine) derivatives. The dipeptide catalyst revealed greatest stereoselectivity in a quaternized poly(ethyleneimine) derivative. A comparison of catalytic effects on both the rate constants and stereoselectivities of N-decanoyl-L-histidine and its methyl ester elucidates the cooperative effects of carboxyl groups in the polymer domains. The structure of the substrates influenced both the rate constants and stereoselectivities in polymer domains.
    Additional Material: 6 Ill.
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  • 5
    Electronic Resource
    Electronic Resource
    New York : Wiley-Blackwell
    Journal of Polymer Science: Polymer Physics Edition 22 (1984), S. 1697-1699 
    ISSN: 0098-1273
    Keywords: Physics ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Additional Material: 1 Tab.
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  • 6
    Electronic Resource
    Electronic Resource
    New York : Wiley-Blackwell
    Journal of Polymer Science: Polymer Physics Edition 19 (1981), S. 151-163 
    ISSN: 0098-1273
    Keywords: Physics ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: The rheological behavior of an uncrosslinked polybutadiene on sudden application of finite strain was examined. The shear stress σ, two components of birefringence, and the extinction angle were measured in shear (magnitude of shear γ ≤ 3.5) and tensile stress and the birefringence were measured in uniaxial elongation (elongation ratio λ ≤ 3.8). Measurements were performed at 30°C with a tensile tester equipped with appropriate sample holders. The stress-optical coefficient was 3.01 × 10-9Pa-1. The first and second normal-stress differences v1 and v2 were separately evaluated with the use of stress-optical law. The Lodge - Meissner relation v1 = γσ held good. The ratio v2/v1 was independent of time and varied from about -0.3 to -0.2 with increasing γ in the range of measurements. Each of the stress components was factored into a function of strain and one of time, and the latter was common to all the stress components. Simple formulas were proposed to represent stress components in step deformations.
    Additional Material: 8 Ill.
    Type of Medium: Electronic Resource
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  • 7
    Electronic Resource
    Electronic Resource
    New York : Wiley-Blackwell
    Journal of Polymer Science: Polymer Physics Edition 19 (1981), S. 517-527 
    ISSN: 0098-1273
    Keywords: Physics ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: The shear stress σ, two components of birefringence, and extinction angle were measured for a concentrated polystyrene solution in step-shear deformation of magnitude of shear 0.3 ≤ γ ≤ 4.0. The stress-optical coefficient did not depend on either γ or time. The first and the second normal-stress differences v1 and v2 were evaluated with the use of the stress-optical law. Over a certain range of long times, σ could be factored as σ = γh(γ)G(t) and the quantity h(γ) agreed with the prediction of the Doi-Edwards theory based on the de Gennes tube model of entangled polymer chains. At short times the effect of γ on σ/γ was smaller than at long times. The relaxation spectrum became approximately independent of γ at the short-time end of the rubbery plateau region. The ratios v1/σ and v2/v1 were independent of time and were in quantitative agreement with those predicted by the Doi-Edwards theory: v1/σ was equal to γ, v2/v1 was negative, and |v2/v1| decreased with increasing γ.
    Additional Material: 6 Ill.
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  • 8
    Electronic Resource
    Electronic Resource
    New York : Wiley-Blackwell
    Journal of Polymer Science: Polymer Physics Edition 21 (1983), S. 367-378 
    ISSN: 0098-1273
    Keywords: Physics ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: Blends of poly(butylene terephthalate) (PBT) and a copolyester of bisphenol-A with 50% terephthalate-50% isophthalate (PAr), before and after transesterification, have been studied by thermal and dynamic mechanical tests to determine crystallinity and phase behavior. Blends without transesterification, as prepared by solution precipitation, show a single Tg, indicating amorphous miscibility of PBT and PAr. A melting-point depression for PBT crystals is not observed; this means that PBT crystallizes excluding PAr and the entropy of melting is small. The highest fractional crystallinity for PBT is obtained at 20-35% of PAr. Transesterified blends were obtained by holding the physical blends at 250°C for up to 16 h. The transesterified systems show higher Tg's than the corresponding physical blends and also show a marked melting-point depression and lesser PBT crystallinity at the corresponding increased PAr content.
    Additional Material: 10 Ill.
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  • 9
    Electronic Resource
    Electronic Resource
    New York : Wiley-Blackwell
    Journal of Polymer Science: Polymer Physics Edition 22 (1984), S. 1193-1200 
    ISSN: 0098-1273
    Keywords: Physics ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology , Physics
    Notes: Some unusual x-ray diffraction results have been obtained corresponding to an ordered structure in binary blends of a poly(butylene terephthalate) (PBT) with a polyarylate. The polyarylate is a noncrystallizable copolyester of bisphenol-A with a 50-50 mix of terephthaloylisophthaloyl units. The two polyesters have been previously found by us to be compatible in their mutual amorphous phase. The x-ray data are shown to be consistent with a nematic order for the PBT in the blends.
    Additional Material: 1 Ill.
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  • 10
    Electronic Resource
    Electronic Resource
    New York : Wiley-Blackwell
    Journal of Polymer Science: Polymer Chemistry Edition 20 (1982), S. 2303-2311 
    ISSN: 0360-6376
    Keywords: Physics ; Polymer and Materials Science
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Glow discharge polymerization in the CF2Cl2/CH4, CHF2Cl, and CHFCl2 systems was performed. The materials formed are not polymers but oligomers; they contain considerable chlorine and fluorine and their surface energies are not so low as those of the polymers from the CF4/CH4 mixture. These materials dissolved in organic solvents and their molecular weights were measured. In glow discharge polymerization of methylmethacrylate the addition of CHFCl2 caused formed polymers to be soluble in organic solvents. This polymerization is discussed.
    Additional Material: 3 Ill.
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