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  • Chemistry  (10)
  • Condensed Matter: Electronic Properties, etc.  (2)
  • Imines  (2)
  • galactokinase
  • 2020-2022  (1)
  • 2010-2014  (2)
  • 1990-1994  (9)
  • 1965-1969  (2)
  • 1
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    Final Evaluation Memorandum: Strategies for Resolving Low Dissolved Oxygen and Methylmercury Events in Northern Suisun Marsh (2021)
    State Water Resources Control Board | Sacramento, CA
    In:  stuart@swampthing.org | http://aquaticcommons.org/id/eprint/6470 | 393 | 2020-08-24 04:45:31 | 6470 | Bachand & Associates
    Details
    Publication Date: 2021-07-14
    Description: The purpose of the project is to improve our understanding about best management practices that can be utilized on diked managed wetlands in Suisun Marsh for reducing the occurrence of low dissolved oxygen (DO) and high methylmercury (MeHg) events associated primarily with fall flood-up practices. Low DO events are of concern because they can lead to undue stress and even mortality of sensitive aquatic organisms. Elevated MeHg levels are of concern because MeHg is a neurotoxin that bio-magnifies up the food chain and can cause deleterious effects to higher trophic level consumers such as piscivorous fish, birds, and mammals (including humans). This study involved two years (2007-2008) of intensive field data collection at two managed wetland sites in northwest Suisun Marsh and their surrounding tidal sloughs, an area with prior documented low DO events. In addition, the study collected limited soils and water quality field data and mapped vegetation for three managed wetland sites in the central interior of Suisun Marsh, for the purpose of examining whether wetlands at other locations exhibit characteristics that could indicate potential for similar concerns. In Year 1 of the study, the objective was to identify the baseline conditions in the managed wetlands and determine which physical management conditions could be modified for Year 2 to reduce low DO and MeHg production issues most effectively. The objective of Year 2 was to evaluate the effectiveness of these modified management actions at reducing production of low DO and elevated MeHg conditions within the managed wetlands and to continue improving understanding of the underlying biogeochemical processes at play. This Final Evaluation Memorandum examined a total of 19 BMPs, 14 involving modified water management operations and the remaining five involving modified soil and vegetation management practices. Some of these BMPs were previously employed and others have not yet been tested. For each BMP this report assesses its efficacy in improving water quality conditions and potential conflicts with wetland management. It makes recommendations for further study (either feasibility assessments or field testing) and whether to consider for future use. Certain previously used BMPs were found to be important contributors to poor water quality conditions and their continued use is not recommended. Some BMPs that could improve water quality conditions appear difficult to implement in regards to compatibility with wetland management; these BMPs require further elaboration and feasibility assessment to determine whether they should be field tested. In practice for any given wetland, there is likely a combination of BMPs that would together have the greatest potential to address the low DO and high MeHg water quality concerns. Consequently, this report makes no sweeping recommendations applicable to large groups of wetlands but instead promotes a careful consideration of factors at each wetland or small groups of wetlands and from that assessment to apply the most effective suite of BMPs.This report also identifies a number of recommended future actions and studies. These recommendations are geared toward improving the process understanding of factors that promote low DO and high MeHg conditions, the extent of these problems in Suisun Marsh, the regulatory basis for the DO standards for a large estuarine marsh, the economics of BMPs, and alternative approaches to BMPs on diked managed wetlands that may address the water quality issues. The most important of these recommendations is that future BMP implementation should be carried out within the context of rigorous scientific evaluation so as to gain the maximum improvement in how to manage these water quality issues in the diked managed wetlands of Suisun Marsh.
    Description: State Water Resources Control Board
    Description: Project Number 06-283-552-0
    Keywords: Agriculture ; Chemistry ; Engineering ; Environment ; Fisheries ; Management ; Pollution ; BMPs ; dissolved oxygen ; mercury ; Suisun Marsh ; managed wetlands ; best management practices ; methyl mercury ; hydrology ; tidal water quality ; Wetlands and Water Resources ; Bachand and Associates ; Suisun Resource Conservation District ; California Department of Fish and Game ; California Department of Water Resources ; University of California Davis ; U.S. Geological Survey
    Repository Name: AquaDocs
    Type: monograph
    Format: application/pdf
    Format: application/pdf
    Format: 353
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  • 2
    Electronic Resource
    Electronic Resource
    Normal expression of thymidine kinase and O6-methylguanine-DNA methyltransferase in cultured fibroblasts from individuals with hereditary galactokinase deficiency (1991)
    Springer
    Biochemical genetics 29 (1991), S. 135-144 
    Details
    ISSN: 1573-4927
    Keywords: galactokinase ; thymidine kinase ; O6-methylguanine-DNA methyltransferase ; gene regulation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Abstract Expression of the enzymes galactokinase, thymidine kinase, and O6-methylguanine-DNA methyltransferase is occasionally coordinately regulated in human cell lines. We have measured the activities of these three enzymes in extracts of fibroblasts from individuals with hereditary galactokinase deficiency. These cells do not express measurable galactokinase activity. The levels of O6-methylguanine-DNA methyltransferase were in the normal range in cells from three galactokinase-deficient individuals. The activity of thymidine kinase in the affected cells was in the normal range for two of the three individuals. The reduced thymidine kinase activity in the third individual reflected the extremely poor growth of the cells in culture. Immortalization of one galactokinase-deficient cell line resulted in loss of O6-methylguanine-DNA methyltransferase activity, but the galactokinase and thymidine kinase levels remained unchanged. The data indicate that the loss of galactokinase activity in these individuals is the consequence of an alteration of gene expression which does not involve coordinate silencing with the thymidine kinase and methyltransferase loci.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF00554207
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  • 3
    Electronic Resource
    Electronic Resource
    Normal expression of thymidine kinase and O6-methylguanine-DNA methyltransferase in cultured fibroblasts from individuals with hereditary galactokinase deficiency (1991)
    Springer
    Biochemical genetics 29 (1991), S. 135-144 
    Details
    ISSN: 1573-4927
    Keywords: galactokinase ; thymidine kinase ; O6-methylguanine-DNA methyltransferase ; gene regulation
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Chemistry and Pharmacology
    Notes: Abstract Expression of the enzymes galactokinase, thymidine kinase, and O6-methylguanine-DNA methyltransferase is occasionally coordinately regulated in human cell lines. We have measured the activities of these three enzymes in extracts of fibroblasts from individuals with hereditary galactokinase deficiency. These cells do not express measurable galactokinase activity. The levels of O6-methylguanine-DNA methyltransferase were in the normal range in cells from three galactokinase-deficient individuals. The activity of thymidine kinase in the affected cells was in the normal range for two of the three individuals. The reduced thymidine kinase activity in the third individual reflected the extremely poor growth of the cells in culture. Immortalization of one galactokinase-deficient cell line resulted in loss of O6-methylguanine-DNA methyltransferase activity, but the galactokinase and thymidine kinase levels remained unchanged. The data indicate that the loss of galactokinase activity in these individuals is the consequence of an alteration of gene expression which does not involve coordinate silencing with the thymidine kinase and methyltransferase loci.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF02401808
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  • 4
    Electronic Resource
    Electronic Resource
    (E,Z) Equilibria, 14. Substituent-Induced Chemical Shifts along the C = N Bond of Schiff Bases (1992)
    Weinheim : Wiley-Blackwell
    Berichte der deutschen chemischen Gesellschaft 125 (1992), S. 2033-2040 
    Details
    ISSN: 0009-2940
    Keywords: 13C NMR, SCS ; Substituent effects ; Imines ; Isomerization, (E,Z) Schiff bases ; Chemistry ; Inorganic Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Sterically congested N-(1,1,3,3-tetraalkyl-2-indanylidene)-amines 8-11, N-(cyclopentylidene)anilines 13-17, and two of their salts are described, together with a short synthesis of 2-imino-1,1,3,3-tetramethylindan (5). Some of these imines show rapid (E,Z) equilibration. Positively and negatively charged nitrogen functions (in 6 and 7) cause opposite 1H- and 13C-NMR chemical shift effects along the C = N bond. Chemical shifts are almost equally affected by the lone electron pair and by the imino N-H bond. Substituent-induced chemical shifts (SCS) have been assigned for all syn and anti positions with respect to methyl, phenyl, and 2,6-dimethylphenyl groups at the imino nitrogen atom. The structurally well-defined, rigid imines recommend themselves as new models for the calibration of theoretical approaches to syn/anti-differentiating SCS.
    Additional Material: 3 Tab.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/cber.19921250911
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  • 5
    Electronic Resource
    Electronic Resource
    (E, Z)1-Equilibria, 17 Demonstration of the Nitrogen Inversion Mechanism of Imines in a Schiff Base ModelDedicated to Professor Heinrich Nöth on the occasion of his 65th birthday. (1993)
    Weinheim : Wiley-Blackwell
    Berichte der deutschen chemischen Gesellschaft 126 (1993), S. 747-754 
    Details
    ISSN: 0009-2940
    Keywords: Diastereotopomerization, (E, Z) ; Imines ; Inversion, nitrogen ; Permethylation ; Chemistry ; Inorganic Chemistry
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Experimental differentiation between pure C=N double bond rotation and nitrogen inversion in N1-arylimines is possible with a single compound (13b) under the proviso of slow rotation about the N-aryl single bond. Labelling by 1H and 13C nuclei at the diastereotopic faces of the C=N moiety as well as of the N-aryl group is the clue to a successful stereodynamic analysis, as performed by variable-temperature NMR spectroscopy of 13b, a sterically congested and chiral model compound. Interpretation of similar measurements on a second model (13d) is less straightforward. The experimental observation of time-averaged Cs symmetry by NMR coalescences is only compatible with a mechanism of (E/Z) stereomutation either by pure inversion at sp2 nitrogen or by a contribution from C=N rotation together with a synchronized (geared) controtation about the N-aryl single bond. However, the latter combination is concluded to be predominantly inversion-like by comparisons with related imines.
    Additional Material: 1 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/cber.19931260327
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  • 6
    Electronic Resource
    Electronic Resource
    Expression of recombinant protein A from the lac promoter in Escherichia coli JM83 is not subject to catabolite repression when grown under specific conditions of continuous culture (1991)
    New York, NY [u.a.] : Wiley-Blackwell
    Biotechnology and Bioengineering 38 (1991), S. 1050-1058 
    Details
    ISSN: 0006-3592
    Keywords: catabolite repression ; protein A ; membrane proteins ; continuous culture ; protein expression ; Chemistry ; Biochemistry and Biotechnology
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Biology , Process Engineering, Biotechnology, Nutrition Technology
    Notes: Although widely used in experimental and industrial situations, genetically engineered plasmids containing the lac promoter from Escherichia coli are subject to catabolite repression when grown in glucose-containing media. Several methods of overcoming this problem have been investigated by studying the expression of the protein A gene from Staphylococcus aureus under the control of the Escherichia coli lac promoter. When glycerol is used as a sole carbon source, the plasmid is unstable and is rapidly lost from the culture. When the bacteria are grown in chemostats under glucose limitation, the plasmid is maintained, even at high dilution rates, and the expression of protein A is similar to that observed when glycerol was used. The balance between metabolic load and protein A expression seems to be maintained by reducing the gene dose to a tolerable level. Depending on the metabolic conditions prevailing in the culture, this is achieved, either by reducing the copy number of the plasmid or in extreme cases by removing the plasmid altogether.
    Additional Material: 10 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/bit.260380914
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  • 7
    Electronic Resource
    Electronic Resource
    Mass spectra of trimethylsilyl derivatives of naturally occurring flavonoid aglycones and chalcones (1991)
    Chichester : Wiley-Blackwell
    Biological Mass Spectrometry 26 (1991), S. 157-160 
    Details
    ISSN: 0030-493X
    Keywords: Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: Electron impact mass spectra of the trimethylsilyl derivatives of a series of flavonoid aglycones and chalcones are reported. The spectra show prominent ions arising from fragmentation of the trimethylsilyl (TMS) groups. Inter-actions between adjacent TMS groups, and between TMS groups in the 3- or 5-position (6′-position for the chalcones) and the C-ring carbonyl, yield structurally significant ions. Few fragments associated with the retro-Diels-Alder cleavage of the C-ring characteristic of the underivatized compounds, are observed. The TMS derivatives thus provide complementary information for the identification of flavonoid aglycones and chalcones in biological systems.
    Additional Material: 1 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/oms.1210260310
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  • 8
    Electronic Resource
    Electronic Resource
    A fast x-ray counting system (1993)
    New York, NY [u.a.] : Wiley-Blackwell
    X-Ray Spectrometry 22 (1993), S. 58-60 
    Details
    ISSN: 0049-8246
    Keywords: Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Physics
    Notes: An unusually fast x-ray detector and pulse processing counting system has been devised and tested. The overall dead time of the system was determined experimentally to be 42 ns.
    Additional Material: 1 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/xrs.1300220113
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  • 9
    Electronic Resource
    Electronic Resource
    Substituent-induced chemical shifts (SCS) by the phenyl group in sterically congested styrene derivativesSterically Congested Molecules, Part 7. For Part 6, see R. Knorr et al., Chem. Ber. 126, in press (1993). (1993)
    Chichester : Wiley-Blackwell
    Organic Magnetic Resonance 31 (1993), S. 388-393 
    Details
    ISSN: 0749-1581
    Keywords: 13C NMR ; 1H NMR ; 9-Methylenefluorenes ; Substituent effects ; Substituent-induced chemical shifts ; Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: The two 13C NMR methyl signals of the sterically congested 9-benzylidene-1,8-dimethylfluorene (1a) have the surprisingly small separation of only 0.37 ppm; for 9-benzylidene-2,7-dimethylfluorene the corresponding methyl separation is 0.04 ppm. An alternative analysis of 1a with respect to 1,8-dimethylfluorene shows that the perturbing syn-phenyl substituent has caused a downfield ( + 0.47 ppm) 13C shift but an upfield 1H shift ( - 0.97 ppm) of the compressed 1-CH3 group. For further comparisons, NMR assignments were also made for 2,7-dimethylfluorene, 1,8-dimethylfluoren-9-one and 2-(1,1-dimethylethyl)-3,3-dimethyl-1-phenylbut-1-ene.
    Additional Material: 2 Tab.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/mrc.1260310415
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  • 10
    Electronic Resource
    Electronic Resource
    Substituent-induced chemical shifts along C=C double bondsSterically Congested Molecules, Part 8. For Part 7, see Ref. 6. (1993)
    Chichester : Wiley-Blackwell
    Organic Magnetic Resonance 31 (1993), S. 557-565 
    Details
    ISSN: 0749-1581
    Keywords: 13C NMR ; 1H NMR Olefins ; Substituent effects ; Substituent-induced chenical shifts (SCS) ; Chemistry ; Analytical Chemistry and Spectroscopy
    Source: Wiley InterScience Backfile Collection 1832-2000
    Topics: Chemistry and Pharmacology
    Notes: 1H and 13C NMR signals were assigned and CH coupling constants (1J, 2J, 3J) determined for a series of α-mono-and α,α-disubstituted (1,1,3,3-tetramethyl-2-indanylidene)methanes with the following α-substituents: (mesityl)2B, n-propyl, phenyl, tert-butyl-C(=NH), cyano, (tert-butyl)2C(OH), pivaloyl, H2N-CO, PhNH-CO, carboxy, ritro, acetoxy, Me3SiO, Me3Si, PhS, PhSMe+, PhSO, PhSO2, bromo and trimethylstannyl. The 1J couplings with the olefinic proton span the range 124.3-193.7 Hz. Substituent-induced chemical shifts (SCS) of most of the nuclei with respect to the α-unsubstituted olefin obey simple additivity in the α,α-disubstituted compounds and are very similar to the SCS values along the C=N double bond in the isoelectronic (1,1,3,3-tetramethyl-2-indanylidene)amines within the error limits. The exceptions concern nuclei in the immediate vicinity of the perturbing substituent. A dominant mechanistic contribution of electric field effects appears likely for the more distant aromatic part of the indanylidene moiety. The chemical shifts of two (2,2,5,5-tetramethylcyclopentylidene)methanes are shown to be compatible with the SCS parameters from the indanylidene series.
    Additional Material: 2 Ill.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1002/mrc.1260310608
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