ALBERT

Description: Fishers' knowledge research (FKR) aims to enhance the use of experiential knowledge of fish harvesters in fisheries research, assessment, and management. Fishery participants are able to provide unique knowledge, and that knowledge forms an important part of "best available information" for fisheries science and management. Fishers' knowledge includes, but is much greater than, basic biological fishery information. It includes ecological, economic, social, and institutional knowledge, as well as experience and critical analysis of experiential knowledge. We suggest that FKR, which may in the past have been defined quite narrowly, be defined more broadly to include both fishery observations and fishers "experiential knowledge" provided across a spectrum of arrangements of fisher participation. FKR is part of the new and different information required in evolving "ecosystem-based" and "integrated" management approaches. FKR is a necessary element in the integration of ecological, economic, social, and institutional considerations of future management. Fishers' knowledge may be added to traditional assessment with appropriate analysis and explicit recognition of the intended use of the information, but fishers' knowledge is best implemented in a participatory process designed to receive and use it. Co-generation of knowledge in appropriately designed processes facilitates development and use of fishers' knowledge and facilitates the participation of fishers in assessment and management, and is suggested as best practice in improved fisheries governance.

Description: Ellesmere Island in Arctic Canada displays a complex geological evolution. The region was affected by two distinct orogenies, the Palaeozoic Ellesmerian orogeny (the Caledonian equivalent in Arctic Canada and Northern Greenland) and the Palaeogene Eurekan orogeny, related to the opening of Baffin Bay and the consequent convergence of the Greenland plate. The details of this complex evolution and the present-day deep structure are poorly constrained in this remote area and deep geophysical data are sparse. Receiver function analysis of seven temporary broad-band seismometers of the Ellesmere Island Lithosphere Experiment complemented by two permanent stations provides important data on the crustal velocity structure of Ellesmere Island. The crustal expression of the northernmost tectonic block of Ellesmere Island (~82°–83°N), Pearya, which was accreted during the Ellesmerian orogeny, is similar to that at the southernmost part, which is part of the Precambrian Laurentian (North America-Greenland) craton. Both segments have thick crystalline crust (~35–36 km) and comparable velocity–depth profiles. In contrast, crustal thickness in central Ellesmere Island decreases from ~24–30 km in the Eurekan fold and thrust belt (~79.7°–80.6°N) to ~16–20 km in the Hazen Stable Block (HSB; ~80.6°–81.4°N) and is covered by a thick succession of metasediments. A deep crustal root (~48 km) at ~79.6°N is interpreted as cratonic crust flexed beneath the Eurekan fold and thrust belt. The Carboniferous to Palaeogene sedimentary succession of the Sverdrup Basin is inferred to be up to 1–4 km thick, comparable to geologically-based estimates, near the western margin of the HSB.

Description: The DOBRE-2 wide-angle reflection and refraction profile was acquired in June 2007 as a direct, southwestwards prolongation of the 1999 DOBREfraction'99 that crossed the Donbas Foldbelt in eastern Ukraine. It crosses the Azov Massif of the East European Craton, the Azov Sea, the Kerch Peninsula (the easternmost part of Crimea) and the northern East Black Sea Basin, thus traversing the entire Crimea–Caucasus compressional zone centred on the Kerch Peninsula. The DOBRE-2 profile recorded a mix of onshore explosive sources as well as airguns at sea. A variety of single-component recorders were used on land and ocean bottom instruments were deployed offshore and recovered by ship. The DOBRE-2 datasets were degraded by a lack of shot-point reversal at the southwestern terminus and by some poor signal registration elsewhere, in particular in the Black Sea. Nevertheless, they allowed a robust velocity model of the upper crust to be constructed along the entire profile as well as through the entire crust beneath the Azov Massif. A less well constrained model was constructed for much of the crust beneath the Azov Sea and the Kerch Peninsula. The results showed that there is a significant change in the upper crustal lithology in the northern Azov Sea, expressed in the near surface as the Main Azov Fault; this boundary can be taken as the boundary between the East European Craton and the Scythian Platform. The upper crustal rocks of the Scythian Platform in this area probably consist of metasedimentary rocks. A narrow unit as shallow as about 5 km and characterized by velocities typical of the crystalline basement bounds the metasedimentary succession on its southern margin and also marks the northern margin of the northern foredeep and the underlying successions of the Crimea–Caucasus compressional zone in the southern part of the Azov Sea. A broader and somewhat deeper basement unit (about 11 km) with an antiformal shape lies beneath the northern East Black Sea Basin and forms the southern margin of the Crimea–Caucasus compressional zone. The depth of the underlying Moho discontinuity increases from 40 km beneath the Azov Massif to 47 km beneath the Crimea–Caucasus compressional zone.

Description: The margin of the northeastern Black Sea is formed by the Crimea and Kerch peninsulas, which separate it from the Azov Sea to the north. The age and architecture of the sedimentary successions in this area are described from exploration reflection seismic profiling acquired in the area, in addition to the regional DOBRE-2 CDP profile acquired in 2007. The sediments range in age from Mesozoic to Quaternary and can be divided into five seismo-stratigraphic complexes linked to the tectono-sedimentological evolution of the area. The present regional basin architecture consists of a series of basement structural highs separating a series of sedimentary depocentres and is mainly a consequence of the compressional tectonic regime affecting the area since the Eocene. This has focused shortening deformation and uplift along the axis of the Crimea–Caucasus Inversion Zone on the Kerch Peninsula and Kerch Shelf of the Black Sea. Two major sedimentary basins that mainly formed during this time – the Sorokin Trough in the Black Sea and the Indolo-Kuban Trough to the north of the Kerch Peninsula in the Azov Sea – formed as marginal troughs to the main inversion zone.

Description: Modern industrial agriculture depends on high-density cultivation of genetically similar crop plants, creating favorable conditions for the emergence of novel pathogens with increased fitness in managed compared with ecologically intact settings. Here, we present the genome sequence of six strains of the cucurbit bacterial wilt pathogen Erwinia tracheiphila (Enterobacteriaceae) isolated from infected squash plants in New York, Pennsylvania, Kentucky, and Michigan. These genomes exhibit a high proportion of recent horizontal gene acquisitions, invasion and remarkable amplification of mobile genetic elements, and pseudogenization of approximately 20% of the coding sequences. These genome attributes indicate that E. tracheiphila recently emerged as a host-restricted pathogen. Furthermore, chromosomal rearrangements associated with phage and transposable element proliferation contribute to substantial differences in gene content and genetic architecture between the six E. tracheiphila strains and other Erwinia species. Together, these data lead us to hypothesize that E. tracheiphila has undergone recent evolution through both genome decay (pseudogenization) and genome expansion (horizontal gene transfer and mobile element amplification). Despite evidence of dramatic genomic changes, the six strains are genetically monomorphic, suggesting a recent population bottleneck and emergence into E. tracheiphila’ s current ecological niche.

Description: The Z Cam-type dwarf nova AT Cancri (AT Cnc) displays a classical nova (CN) shell, demonstrating that mass transfer in cataclysmic binaries decreases substantially after a CN eruption. The hibernation scenario of cataclysmic binaries predicts such a decrease, on a time-scale of a few centuries. In order to measure the time since AT Cnc's last CN eruption, we have measured the radial velocities of a hundred clumps in its ejecta with SITELLE, Canada–France–Hawaii Telescope's recently commissioned imaging Fourier transform spectrometer. These range from –455 to +490 km s –1 . Coupled with the known distance to AT Cnc of 460 pc, the size of AT Cnc's shell, and a simple model of nova ejecta deceleration, we determine that the last CN eruption of this system occurred $330_{-90}^{+135}$  yr ago. This is the most rapid transition from a high mass-transfer rate, nova-like variable to a low mass-transfer rate, dwarf nova yet measured, and in accord with the hibernation scenario of cataclysmic binaries. We conclude by noting the similarity in the deduced outburst date (within a century of 1686 ce ) of AT Cnc to a ‘guest star’ reported in the constellation Cancer by Korean observers in 1645 ce .

Description: Permian palynostratigraphic schemes are used primarily to correlate coal- and hydrocarbon-bearing rocks within basins and between basins, sometimes at high levels of biostratigraphic resolution. Up to now, their main shortcoming has been the lack of correlation with schemes outside the basins, coalfields and hydrocarbon fields that they serve, and chiefly a lack of correlation with the international Permian scale. This is partly because of phytogeographical provinciality from the Guadalupian onwards, making correlation between regional palynostratigraphic schemes difficult. However, local high-resolution palynostratigraphic schemes for regions are now being linked either by assemblage-level quantitative taxonomic comparison or by the use of single well-characterized palynological taxa that occur across Permian phytogeographical provinces. Such taxa include: Scutasporites spp., Vittatina spp., Weylandites spp., Lueckisporites virkkiae , Otynisporites eotriassicus and Converrucosisporites confluens . These palynological correlations are being facilitated and supplemented with radiometric, magnetostratigraphic, independent faunal and strontium isotopic dating.

Description: Stock-specific migration-timing and relative abundance of exploited fish species are critical parameters to estimate for management of mixed stock fisheries. Here, we used parentage-based tagging (PBT) together with mixed stock analyses (MSA) to estimate stock-specific abundance and migration-timing in anadromous adult steelhead ( Oncorhynchus mykiss ) sampled at Bonneville Dam in the lower Columbia River. Results indicate that natural-origin steelhead was represented by 11 of 13 possible stocks found throughout the Columbia-Snake river basins, while hatchery-origin steelhead was primarily composed of five stocks from the Snake River drainage. Further, migration-timing differentiated stocks and allowed categorization of early, intermediate, and late migrating stocks. Analyses of age and length data for these stocks also showed that late-arriving fish were larger due to older age and originated primarily from the Clearwater River, South Fork Salmon River, and Dworshak Hatchery, all from the Snake River drainage. Sex ratios tended to be skewed towards females and ranged from 51.5 to 68.9% for hatchery stocks and 60.5–71.8% for natural-origin stocks. This suggests that anadromous migration is favored by females while males are more likely to residualize in freshwater. Overall, this study demonstrates how the use of PBT in MSA can reveal important stock-specific differences in migration-timing and relative abundance and provides critical information for management of mixed stock fisheries.

Description: For climate services to be relevant and informative for users, scientific data definitions need to match users’ perceptions or beliefs. This study proposes and tests novel yet simple methods to compare beliefs of timing of recurrent climatic events with empirical evidence from multiple historical time series. The methods are tested by applying them to the onset date of the monsoon in Bangladesh, where several scientific monsoon definitions can be applied, yielding different results for monsoon onset dates. It is a challenge to know which monsoon definition compares best with people’s beliefs. Time series from eight different scientific monsoon definitions in six regions are compared with respondent beliefs from a previously completed survey concerning the monsoon onset. Beliefs about the timing of the monsoon onset are represented probabilistically for each respondent by constructing a probability mass function (PMF) from elicited responses about the earliest, normal, and latest dates for the event. A three-parameter circular modified triangular distribution (CMTD) is used to allow for the possibility (albeit small) of the onset at any time of the year. These distributions are then compared to the historical time series using two approaches: likelihood scores, and the mean and standard deviation of time series of dates simulated from each belief distribution. The methods proposed give the basis for further iterative discussion with decision-makers in the development of eventual climate services. This study uses Jessore, Bangladesh, as an example and finds that a rainfall definition, applying a 10 mm day−1 threshold to NCEP–NCAR reanalysis (Reanalyis-1) data, best matches the survey respondents’ beliefs about monsoon onset.