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  • 1
    Publication Date: 2012-10-13
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Baker, Monya -- England -- Nature. 2012 Oct 11;490(7419):157. doi: 10.1038/490157a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/23060166" target="_blank"〉PubMed〈/a〉
    Keywords: Genetic Diseases, Inborn/genetics ; Genetic Privacy ; *Genome, Human ; Humans ; Sequence Analysis/economics/ethics/*instrumentation/standards
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 2
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    Nature Publishing Group (NPG)
    Publication Date: 2012-08-31
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Baker, Monya -- England -- Nature. 2012 Aug 30;488(7413):568. doi: 10.1038/488568a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22932355" target="_blank"〉PubMed〈/a〉
    Keywords: Circumcision, Male/economics/ethnology/*statistics & numerical data ; Cultural Characteristics ; Humans ; Internationality ; Male ; Physicians ; Sexually Transmitted Diseases/*epidemiology/*prevention & control ; United States/epidemiology
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 3
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    Nature Publishing Group (NPG)
    Publication Date: 2012-08-24
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Baker, Monya -- England -- Nature. 2012 Aug 23;488(7412):443. doi: 10.1038/488443a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22914147" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; California ; Crops, Agricultural/economics/genetics/metabolism ; Food Labeling/economics/*legislation & jurisprudence ; *Food, Genetically Modified/economics ; Herbicides ; Humans ; Pest Control, Biological/economics/legislation & jurisprudence ; Public Opinion
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 4
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    Nature Publishing Group (NPG)
    Publication Date: 2012-07-20
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Baker, Monya -- England -- Nature. 2012 Jul 18;487(7407):282-3. doi: 10.1038/487282a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22810669" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; *Databases, Genetic/trends ; Gene Expression Profiling ; *Genetic Research/economics ; Humans ; Research/economics/*trends
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 5
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    Nature Publishing Group (NPG)
    Publication Date: 2012-07-28
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Baker, Monya -- England -- Nature. 2012 Jul 23;487(7408):417. doi: 10.1038/487417a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22836978" target="_blank"〉PubMed〈/a〉
    Keywords: Aged, 80 and over ; *Awards and Prizes ; California ; Foundations/economics ; Genome, Human/*genetics ; Genomics/*economics/instrumentation/*methods/trends ; Humans ; Hydrogen-Ion Concentration ; Longevity/genetics ; Semiconductors ; Time Factors
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 6
    Publication Date: 2012-07-18
    Description: Protein stability, assembly, localization and regulation often depend on the formation of disulphide crosslinks between cysteine side chains. Enzymes known as sulphydryl oxidases catalyse de novo disulphide formation and initiate intra- and intermolecular dithiol/disulphide relays to deliver the disulphides to substrate proteins. Quiescin sulphydryl oxidase (QSOX) is a unique, multi-domain disulphide catalyst that is localized primarily to the Golgi apparatus and secreted fluids and has attracted attention owing to its overproduction in tumours. In addition to its physiological importance, QSOX is a mechanistically intriguing enzyme, encompassing functions typically carried out by a series of proteins in other disulphide-formation pathways. How disulphides are relayed through the multiple redox-active sites of QSOX and whether there is a functional benefit to concatenating these sites on a single polypeptide are open questions. Here we present the first crystal structure of an intact QSOX enzyme, derived from a trypanosome parasite. Notably, sequential sites in the disulphide relay were found more than 40 A apart in this structure, too far for direct disulphide transfer. To resolve this puzzle, we trapped and crystallized an intermediate in the disulphide hand-off, which showed a 165 degrees domain rotation relative to the original structure, bringing the two active sites within disulphide-bonding distance. The comparable structure of a mammalian QSOX enzyme, also presented here, shows further biochemical features that facilitate disulphide transfer in metazoan orthologues. Finally, we quantified the contribution of concatenation to QSOX activity, providing general lessons for the understanding of multi-domain enzymes and the design of new catalytic relays.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3521037/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3521037/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Alon, Assaf -- Grossman, Iris -- Gat, Yair -- Kodali, Vamsi K -- DiMaio, Frank -- Mehlman, Tevie -- Haran, Gilad -- Baker, David -- Thorpe, Colin -- Fass, Deborah -- GM26643/GM/NIGMS NIH HHS/ -- P41 RR001081/RR/NCRR NIH HHS/ -- R01 GM026643/GM/NIGMS NIH HHS/ -- England -- Nature. 2012 Aug 16;488(7411):414-8. doi: 10.1038/nature11267.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Structural Biology, Weizmann Institute of Science, Rehovot 76100, Israel.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22801504" target="_blank"〉PubMed〈/a〉
    Keywords: Amino Acid Motifs ; Animals ; Biocatalysis ; Catalytic Domain ; Crystallography, X-Ray ; Disulfides/*metabolism ; Humans ; Mice ; Models, Molecular ; Oxidation-Reduction ; Oxidoreductases/*chemistry/*metabolism ; Protein Conformation ; Rotation ; Trypanosoma brucei brucei/*enzymology
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 7
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    Nature Publishing Group (NPG)
    Publication Date: 2012-12-22
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Baker, Monya -- England -- Nature. 2012 Dec 20;492(7429):321. doi: 10.1038/492321a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/23257857" target="_blank"〉PubMed〈/a〉
    Keywords: Biotechnology/*economics/organization & administration ; California ; Drug Industry/*economics/organization & administration ; Genetics, Medical/*economics/organization & administration ; Genetics, Population ; Genomics/*economics/organization & administration ; Humans ; Iceland
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 8
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    Nature Publishing Group (NPG)
    Publication Date: 2012-11-09
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Baker, Monya -- England -- Nature. 2012 Nov 8;491(7423):171. doi: 10.1038/491171a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/23135443" target="_blank"〉PubMed〈/a〉
    Keywords: *Access to Information ; *Databases, Genetic/utilization ; Genetic Testing/*methods/standards ; Genetics, Medical/*methods/standards ; Humans ; National Institutes of Health (U.S.) ; Sample Size ; United States
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 9
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    Nature Publishing Group (NPG)
    Publication Date: 2012-06-09
    Description: 〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Baker, Monya -- England -- Nature. 2012 Jun 6;486(7401):141-6. doi: 10.1038/486141a.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22678297" target="_blank"〉PubMed〈/a〉
    Keywords: Artifacts ; *Biological Specimen Banks/economics/standards/statistics & numerical data/supply ; & distribution ; Guidelines as Topic ; Humans ; Paraffin Embedding ; Preservation, Biological/economics/instrumentation/*methods/*standards ; Specimen Handling/methods/*standards ; Tissue Fixation
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 10
    Publication Date: 2012-01-27
    Description: The concept of disease-specific chemotherapy was developed a century ago. Dyes and arsenical compounds that displayed selectivity against trypanosomes were central to this work, and the drugs that emerged remain in use for treating human African trypanosomiasis (HAT). The importance of understanding the mechanisms underlying selective drug action and resistance for the development of improved HAT therapies has been recognized, but these mechanisms have remained largely unknown. Here we use all five current HAT drugs for genome-scale RNA interference target sequencing (RIT-seq) screens in Trypanosoma brucei, revealing the transporters, organelles, enzymes and metabolic pathways that function to facilitate antitrypanosomal drug action. RIT-seq profiling identifies both known drug importers and the only known pro-drug activator, and links more than fifty additional genes to drug action. A bloodstream stage-specific invariant surface glycoprotein (ISG75) family mediates suramin uptake, and the AP1 adaptin complex, lysosomal proteases and major lysosomal transmembrane protein, as well as spermidine and N-acetylglucosamine biosynthesis, all contribute to suramin action. Further screens link ubiquinone availability to nitro-drug action, plasma membrane P-type H(+)-ATPases to pentamidine action, and trypanothione and several putative kinases to melarsoprol action. We also demonstrate a major role for aquaglyceroporins in pentamidine and melarsoprol cross-resistance. These advances in our understanding of mechanisms of antitrypanosomal drug efficacy and resistance will aid the rational design of new therapies and help to combat drug resistance, and provide unprecedented molecular insight into the mode of action of antitrypanosomal drugs.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3303116/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3303116/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Alsford, Sam -- Eckert, Sabine -- Baker, Nicola -- Glover, Lucy -- Sanchez-Flores, Alejandro -- Leung, Ka Fai -- Turner, Daniel J -- Field, Mark C -- Berriman, Matthew -- Horn, David -- 085775/Wellcome Trust/United Kingdom -- 085775/Z/08/Z/Wellcome Trust/United Kingdom -- 090007/Wellcome Trust/United Kingdom -- 090007/Z/09/Z/Wellcome Trust/United Kingdom -- 093010/Wellcome Trust/United Kingdom -- 093010/Z/10/Z/Wellcome Trust/United Kingdom -- England -- Nature. 2012 Jan 25;482(7384):232-6. doi: 10.1038/nature10771.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉London School of Hygiene and Tropical Medicine, Keppel Street, London, WC1E 7HT, UK.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22278056" target="_blank"〉PubMed〈/a〉
    Keywords: Aquaglyceroporins/deficiency/metabolism ; Drug Resistance/*genetics ; Eflornithine/pharmacology ; Endocytosis/drug effects ; Glycosylation/drug effects ; High-Throughput Screening Assays ; Humans ; Lysosomes/drug effects/metabolism ; Melarsoprol/pharmacology ; Nifurtimox/pharmacology ; Pentamidine/pharmacology ; RNA Interference ; Suramin/pharmacology ; Trypanocidal Agents/*pharmacology/therapeutic use ; Trypanosoma brucei brucei/cytology/*drug effects/enzymology/metabolism ; Trypanosomiasis, African/*drug therapy/genetics
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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