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  • Articles  (3)
  • MDPI Publishing  (3)
  • Elsevier
  • Entropy  (3)
  • 6431
  • Chemistry and Pharmacology  (3)
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  • Articles  (3)
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  • Chemistry and Pharmacology  (3)
  • Physics  (3)
  • 1
    Publication Date: 2014-08-23
    Description: This work presents a formalism to calculate the configurational entropy of mixing based on the identification of non-interacting atomic complexes in the mixture and the calculation of their respective probabilities, instead of computing the number of atomic configurations in a lattice. The methodology is applied in order to develop a general analytical expression for the configurational entropy of mixing of interstitial solutions. The expression is valid for any interstitial concentration, is suitable for the treatment of interstitial short-range order (SRO) and can be applied to tetrahedral or octahedral interstitial solutions in any crystal lattice. The effect of the SRO of H on the structural properties of the Nb-H and bcc Zr-H solid solutions is studied using an accurate description of the configurational entropy. The methodology can also be applied to systems with no translational symmetry, such as liquids and amorphous materials. An expression for the configurational entropy of a granular system composed by equal sized hard spheres is deduced.
    Electronic ISSN: 1099-4300
    Topics: Chemistry and Pharmacology , Physics
    Published by MDPI Publishing
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  • 2
    Publication Date: 2017-03-10
    Description: The high concentration of macromolecules (i.e., macromolecular crowding) in cellular environments leads to large quantitative effects on the dynamic and equilibrium biological properties. These effects have been experimentally studied using inert macromolecules to mimic a realistic cellular medium. In this paper, two different experimental in vitro systems of diffusing proteins which use dextran macromolecules as obstacles are computationally analyzed. A new model for dextran macromolecules based on effective radii accounting for macromolecular compression induced by crowding is proposed. The obtained results for the diffusion coefficient and the anomalous diffusion exponent exhibit good qualitative and generally good quantitative agreement with experiments. Volume fraction and hydrodynamic interactions are found to be crucial to describe the diffusion coefficient decrease in crowded media. However, no significant influence of the hydrodynamic interactions in the anomalous diffusion exponent is found.
    Electronic ISSN: 1099-4300
    Topics: Chemistry and Pharmacology , Physics
    Published by MDPI Publishing
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  • 3
    Publication Date: 2016-01-01
    Description: This work discusses the development of analytical expressions for the configurational entropy of different states of matter using a method based on the identification of the energy-independent complexes (clustering of atoms) in the system and the calculation of their corresponding probabilities. The example of short-range order (SRO) in Nb-H interstitial solid solution is used to illustrate the choice of the atomic complexes and their structural changes with H concentration, providing an alternative methodology to describe critical properties. The calculated critical composition of the miscibility gap is xc = 0.307, in remarkable agreement with the experimental value of xc ~ 0.31. The same methodology is applied to deduce the equation of state (EOS) of a hard sphere system. The EOS is suitable to describe the percolation thresholds and fulfills both the low and random close packing limits. The model, based on the partition of the space into Voronoi cells, can be applied to any off-lattice system, thus introducing the possibility of computing the configurational entropy of gases, liquids and glasses with the same level of accuracy.
    Electronic ISSN: 1099-4300
    Topics: Chemistry and Pharmacology , Physics
    Published by MDPI Publishing
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