ALBERT

Description: Fusiform rust resistance can involve gene-for-gene interactions where resistance (Fr) genes in the host interact with corresponding avirulence genes in the pathogen, Cronartium quercuum f.sp. fusiforme (Cqf). Here, we identify trees with Fr genes in a loblolly pine population derived from a complex mating design challenged with two Cqf inocula (one gall and 10 gall mixtures). We used single nucleotide polymorphism (SNP) genotypes at sufficient density to ensure linkage between segregating markers and Fr genes identifying SNPs that explained high proportions of variance in disease incidence using BayesCp, that also were significant using Bayesian Association with Missing Data (BAMD) software. Two SNPs mapped near Fr1 and generated significant LOD scores in single marker regression analyses for Fr1/fr1 parent 17 as well as four other parents. One SNP mapped near Fr8 and was significant for parent 28. Two SNPs mapped to linkage groups not previously shown to contain Fr genes and were significant for three parents. Parent 2 showed evidence of Fr gene stacking. Our results suggest that it is feasible to identify trees segregating for Fr genes, and to map Fr genes, based on parental analysis of SNPs that cosegregate with disease incidence in designed resistance screening trials.

Description: A variety of commercial instruments are available for sampling and quantifying microscopic airborne organisms from the environment. Although most samplers are highly sensitive, they are also expensive, costing thousands of dollars per unit, a price that is out of reach for many researchers, especially those looking to design experiments with replication. While looking at options to monitor pine stands for the presence of Fusarium circinatum, the causal agent of pitch canker disease, on multiple sites with several units per site, we developed a simple, low-cost spore trap that allows surveying spore abundance in outdoor environments. The trap consists of a rotating motor that holds a metal rod and two petroleum jelly-coated microscope slides. As the motor rotates, the slides collect airborne particles. To test whether the traps allowed detection of F. circinatum spores, we placed six traps on three sites: an actively-managed slash pine commercial stand located in Lake Butler, FL, a semi-managed loblolly and slash pine stand near Gainesville, FL, and a site with little perturbance at Goethe State Forest, FL, consisting of mainly slash pine trees. The slides were replaced weekly, and F. circinatum was detected by quantitative PCR using species-specific primers. Results show detection of low levels ( X ¯ = 1.7–77.1 picograms ± SE = 0.3–39.7) of the pathogen spores with high reproducibility. These traps offer a low-cost solution to spore, pollen, or small insect trapping experiments for initial or general assessment of a pathogen or species population. Their low cost has the added benefit that multiple traps can be deployed per experiment, thus increasing statistical power by using multiple replications.

Description: With future global temperatures predicted to increase, the relationship between a host, pathogen, and environment, becomes less predictable and epidemics may pose a greater risk to forests worldwide. Resistance breeding is an important disease management tool, but because tree species require long breeding times, it is necessary to develop techniques for testing current pathogen isolates against their hosts. Pitch canker disease of pines, caused by the pathogen Fusarium circinatum, is no exception and represents a threat to pine forests and commercial plantations worldwide, as it thrives at warm temperatures and high humidity. We tested growth of 15 F. circinatum isolates in culture at three temperatures: 25, 27, and 31 °C. We also evaluated the sporulation and pathogenicity of eight of the isolates on two susceptible Pinus elliotti (slash pine) open-pollinated families and one tolerant open-pollinated Pinus taeda (loblolly pine) family. Our results showed significant differences among isolates in the temperature and pathogenicity tests. All isolates showed a significant decrease in growth at 31 °C, although some showed similar growth at 25 and 27 °C. Several of the new isolates tested were more pathogenic than the isolates that the USDA Forest Service Resistance Screening Center (RSC) had been using. The new isolates have now been incorporated into their operational screening program.

Description: Forests, Vol. 9, Pages 586: A Low-Cost Spore Trap Allows Collection and Real-Time PCR Quantification of Airborne Fusarium circinatum Spores Forests doi: 10.3390/f9100586 Authors: Tania Quesada Jennifer Hughes Katherine Smith Keumchul Shin Patrick James Jason Smith A variety of commercial instruments are available for sampling and quantifying microscopic airborne organisms from the environment. Although most samplers are highly sensitive, they are also expensive, costing thousands of dollars per unit, a price that is out of reach for many researchers, especially those looking to design experiments with replication. While looking at options to monitor pine stands for the presence of Fusarium circinatum, the causal agent of pitch canker disease, on multiple sites with several units per site, we developed a simple, low-cost spore trap that allows surveying spore abundance in outdoor environments. The trap consists of a rotating motor that holds a metal rod and two petroleum jelly-coated microscope slides. As the motor rotates, the slides collect airborne particles. To test whether the traps allowed detection of F. circinatum spores, we placed six traps on three sites: an actively-managed slash pine commercial stand located in Lake Butler, FL, a semi-managed loblolly and slash pine stand near Gainesville, FL, and a site with little perturbance at Goethe State Forest, FL, consisting of mainly slash pine trees. The slides were replaced weekly, and F. circinatum was detected by quantitative PCR using species-specific primers. Results show detection of low levels ( X ¯ = 1.7–77.1 picograms ± SE = 0.3–39.7) of the pathogen spores with high reproducibility. These traps offer a low-cost solution to spore, pollen, or small insect trapping experiments for initial or general assessment of a pathogen or species population. Their low cost has the added benefit that multiple traps can be deployed per experiment, thus increasing statistical power by using multiple replications.

Description: Pine forests in the southern United States are a major contributor to the global economy. Through the last three decades, however, there have been concerns about the decline of pine forests attributed mostly to pests and pathogens. A combination of biotic agents and environmental factors and their interaction often influences outbreaks and the resultant damage in the forests. Southern pines experience periodic mortality from bark beetles and root rot fungi and losses from fusiform rust and pitch canker have long been important for management. In recent years, there is also growing evidence of increasing damage from foliar disease in southern pines. Early detection of diseases following changes in foliar characteristics and assessment of potential risks will help us better utilize our resources and manage these forests sustainably. In this study, we used Forest Inventory and Analysis (FIA) data to explore the intensity of foliar disease in three common pines: loblolly (Pinus taeda L.), longleaf (Pinus palustris Mill.), and slash (Pinus elliottii Engelm.) in spatial and temporal terms using tree-level and climatic variables. Results from a tree-level model suggests that crown ratio may be an important factor in pine foliar disease (p 〈 0.1). We applied the MaxEnt model, a presence-only species distribution model (SDM), to explore any association of foliar disease incidences with the climatic variables at a landscape level. Results indicate that mean dew point temperature, maximum vapor pressure deficit, and precipitation during cold months had more influence over disease incidences than other climatic variables. While the sample size is limited as this is an emerging disease in the region, our study provides a basis for further exploration of disease detection methods, disease etiology studies, and hazard mapping.

Description: With future global temperatures predicted to increase, the relationship between a host, pathogen, and environment, becomes less predictable and epidemics may pose a greater risk to forests worldwide. Resistance breeding is an important disease management tool, but because tree species require long breeding times, it is necessary to develop techniques for testing current pathogen isolates against their hosts. Pitch canker disease of pines, caused by the pathogen Fusarium circinatum, is no exception and represents a threat to pine forests and commercial plantations worldwide, as it thrives at warm temperatures and high humidity. We tested growth of 15 F. circinatum isolates in culture at three temperatures: 25, 27, and 31 °C. We also evaluated the sporulation and pathogenicity of eight of the isolates on two susceptible Pinus elliotti (slash pine) open-pollinated families and one tolerant open-pollinated Pinus taeda (loblolly pine) family. Our results showed significant differences among isolates in the temperature and pathogenicity tests. All isolates showed a significant decrease in growth at 31 °C, although some showed similar growth at 25 and 27 °C. Several of the new isolates tested were more pathogenic than the isolates that the USDA Forest Service Resistance Screening Center (RSC) had been using. The new isolates have now been incorporated into their operational screening program.

Description: A variety of commercial instruments are available for sampling and quantifying microscopic airborne organisms from the environment. Although most samplers are highly sensitive, they are also expensive, costing thousands of dollars per unit, a price that is out of reach for many researchers, especially those looking to design experiments with replication. While looking at options to monitor pine stands for the presence of Fusarium circinatum, the causal agent of pitch canker disease, on multiple sites with several units per site, we developed a simple, low-cost spore trap that allows surveying spore abundance in outdoor environments. The trap consists of a rotating motor that holds a metal rod and two petroleum jelly-coated microscope slides. As the motor rotates, the slides collect airborne particles. To test whether the traps allowed detection of F. circinatum spores, we placed six traps on three sites: an actively-managed slash pine commercial stand located in Lake Butler, FL, a semi-managed loblolly and slash pine stand near Gainesville, FL, and a site with little perturbance at Goethe State Forest, FL, consisting of mainly slash pine trees. The slides were replaced weekly, and F. circinatum was detected by quantitative PCR using species-specific primers. Results show detection of low levels ( X ¯ = 1.7–77.1 picograms ± SE = 0.3–39.7) of the pathogen spores with high reproducibility. These traps offer a low-cost solution to spore, pollen, or small insect trapping experiments for initial or general assessment of a pathogen or species population. Their low cost has the added benefit that multiple traps can be deployed per experiment, thus increasing statistical power by using multiple replications.