ALBERT

Description: The Joint Global Ocean Flux Study (JGOFS) has completed a decade of intensive process and time-series studies on the regional and temporal dynamics of biogeochemical processes in five diverse ocean basins. Its field program also included a global survey of dissolved inorganic carbon (DIC) in the ocean, including estimates of the exchange of carbon dioxide (CO2) between the ocean and the atmosphere, in cooperation with the World Ocean Circulation Experiment (WOCE). This report describes the principal achievements of JGOFS in ocean observations, technology development and modelling. The study has produced a comprehensive and high-quality database of measurements of ocean biogeochemical properties. Data on temporal and spatial changes in primary production and CO2 exchange, the dynamics of of marine food webs, and the availability of micronutrients have yielded new insights into what governs ocean productivity, carbon cycling and export into the deep ocean, the set of processes collectively known as the "biological pump." With large-scale, high-quality data sets for the partial pressure of CO2 in surface waters as well for other DIC parameters in the ocean and trace gases in the atmosphere, reliable estimates, maps and simulations of air-sea gas flux, anthropogenic carbon and inorganic carbon export are now available. JGOFS scientists have also obtained new insights into the export flux of particulate and dissolved organic carbon (POC and DOG), the variations that occur in the ratio of elements in organic matter, and the utilization and remineralization of organic matter as it falls through the ocean interior to the sediments. JGOFS scientists have amassed long-term data on temporal variability in the exchange of CO2 between the ocean and atmosphere, ecosystem dynamics, and carbon export in the oligotrophic subtropical gyres. They have documented strong links between these variables and large-scale climate patterns such as the El Nino-Southern Oscillation (ENSO) or the North Atlantic Oscillation (NAO). An increase in the abundance of organisms that fix free nitrogen (N-2) and a shift in nutrient limitation from nitrogen to phosphorus in the subtropical North Pacific provide evidence of the effects of a decade of strong El Ninos on ecosystem structure and nutrient dynamics. High-quality data sets, including ocean-color observations from satellites, have helped modellers make great strides in their ability to simulate the biogeochemical and physical constraints on the ocean carbon cycle and to extend their results from the local to the regional and global scales. Ocean carbon-cycle models, when coupled to atmospheric and terrestrial models, will make it possible in the future to predict ways in which land and ocean ecosystems might respond to changes in climate.

Description: Ten ODP sites drilled in a depth transect (2164–4775 m water depth) during Leg 172 recovered high-deposition rate (〉20 cm/kyr) sedimentary sections from sediment drifts in the western North Atlantic. For each site an age model covering the past 0.8–0.9 Ma has been developed. The time scales have a resolution of 10–20 kyr and are derived by tuning variations of estimated carbonate content to the orbital parameters precession and obliquity. Based on the similarity in the signature of proxy records and the spectral character of the time series, the sites are divided into two groups: precession cycles are better developed in carbonate records from a group of shallow sites (2164–2975 m water depth, Sites 1055–1058) while the deeper sites (2995–4775 m water depth, Sites 1060–1063) are characterized by higher spectral density in the obliquity band. The resulting time scales show excellent coherence with other dated carbonate and isotope records from low latitudes. Besides the typical Milankovitch cyclicity significant variance of the resulting carbonate time series is concentrated at millennial-scale changes with periods of about 12, 6, 4, 2.5, and 1.5 kyr. Comparisons of carbonate records from the Blake Bahama Outer Ridge and the Bermuda Rise reveal a remarkable similarity in the time and frequency domain indicating a basin-wide uniform sedimentation pattern during the last 0.9 Ma.

Description: Between 1991 and 1999, carbon measurements were made on twenty-five WOCE/JGOFS/OACES cruises in the Pacific Ocean. Investigators from 15 different laboratories and four countries analyzed at least two of the four measurable ocean carbon parameters (DIC, TAlk, fCO2, and pH) on almost all cruises. The goal of this work is to assess the quality of the Pacific carbon survey data and to make recommendations for generating a unified data set that is consistent between cruises. Several different lines of evidence were used to examine the consistency, including comparison of calibration techniques, results from certified reference material analyses, precision of at-sea replicate analyses, agreement between shipboard analyses and replicate shore based analyses, comparison of deep water values at locations where two or more cruises overlapped or crossed, consistency with other hydrographic parameters, and internal consistency with multiple carbon parameter measurements. With the adjustments proposed here, the data can be combined to generate a Pacific Ocean data set, with over 36,000 unique sample locations analyzed for at least two carbon parameters in most cases. The best data coverage was for DIC, which has an estimated overall accuracy of ∼3 μmol kg−1. TAlk, the second most common carbon parameter analyzed, had an estimated overall accuracy of ∼5 μmol kg−1. To obtain additional details on this study, including detailed crossover plots and information on the availability of the compiled, adjusted data set, visit the Global Data Analysis Project web site at: http://cdiac.esd.ornl.gov/oceans/glodap.

Description: Energy in the form of electricity can be harvested from marine sediments by placing a graphite electrode (the anode) in the anoxic zone and connecting it to a graphite cathode in the overlying aerobic water. We report a speciÞc enrichment of microorganisms of the family Geobacteraceae on energyharvesting anodes, and we show that these microorganisms can conserve energy to support their growth by oxidizing organic compounds with an electrode serving as the sole electron acceptor. This Þnding not only provides a method for extracting energy from organic matter, but also suggests a strategy for promoting the bioremediation of organic contaminants in subsurface environments.

Description: We determined the coordination environment of Zn2+ in aqueous Cl- brines at 25 °C and 300 °C using ab initio molecular dynamics simulations. The ZnCl+ and ZnCl2 complexes exist as pseudo-octahedral ZnClm(H2O)6-m clusters at 25 °C but occur as pseudo-tetrahedral ZnClm(H2O)4-m clusters at 300 °C. The ZnCl3- complex occurs as the pseudo-tetrahedral ZnCl3(H2O)- cluster at 25 and 300 °C. The tetrahedral ZnCl42- complex, however, is the dominant Zn−Cl complex at 25 °C, at least in highly concentrated (7.4 m) Cl- brines. The change in hydration number with temperature for the ZnCl+ and ZnCl2 complexes will complicate extrapolations of solvation energies to hydrothermal conditions using a Born-model-based equation of state.

Description: Oceanic ecosystems altered by interdecadal climate variability may provide a feedback to the physical climate by phytoplankton affecting heat fluxes into the upper ocean and dimethylsulfide fluxes into the atmosphere

Description: In our analysis [Rahmstorf et al., 2004], we arrived at two main conclusions: the data of Shaviv and Veizer [2003] do not show a significant correlation of cosmic ray flux (CRF) and climate, and the authors' estimate of climate sensitivity to CO2 based on a simple regression analysis is questionable. After careful consideration of Shaviv and Veizer's comment, we want to uphold and reaffirm these conclusions. Concerning the question of correlation, we pointed out that a correlation arose only after several adjustments to the data, including shifting one of the four CRF peaks and stretching the time scale. To calculate statistical significance, we first need to compute the number of independent data points in the CRF and temperature curves being correlated, accounting for their autocorrelation. A standard estimate [Quenouille, 1952] of the number of effective data points is urn:x-wiley:00963941:media:eost14930:eost14930-math-0001 where N is the total number of data points and r1, r2 are the autocorrelations of the two series. For the curves of Shaviv and Veizer [2003], the result is NEFF = 4.8. This is consistent with the fact that these are smooth curves with four humps, and with the fact that for CRF the position of the four peaks is determined by four spiral arm crossings or four meteorite clusters, respectively; that is, by four independent data points. The number of points that enter the calculation of statistical significance of a linear correlation is (NEFF− 2), since any curves based on only two points show perfect correlation; at least three independent points are needed for a meaningful result.

Description: In the present work responses of carp (Cyprinus carpio) head kidney-derived neutrophils to the blood parasite T. borreli, and the consequences of these responses for parasite survival and other host response mechanisms, were studied. In co-cultures of head kidney leucocytes (HKL) with viable and lysed T. borreli a prominent shape change of neutrophilic granulocytes towards increased size and complexity was observed. In addition, the longevity of neutrophils in vitro was prolonged in the presence of T. borreli antigens. In these cultures, neutrophils also exhibited an increased phagocytosis activity. An up regulation of the production of nitric oxide (NO) and reactive oxygen species (ROS) was observed in T. borreli- and mitogen-stimulated HKL cultures. However, addition of live, fluorescence-labelledT. borreli to previously stimulated HKL cultures, revealed neither killing nor phagocytosis of the parasite by activated neutrophils. Moreover, viable T. borreli, when added to HKL cultures of infected carp, reduced their phagocytosis activity and NO production. Supernatants of co-cultures between T. borreli and HKL also contained mediators, which suppressed a mitogen-induced proliferative response of peripheral blood leucocytes (PBL) in vitro. Thus, while T. borreli itself appeared not to be sensitive to responses of activated neutrophils, the flagellates interferes with the production of immunomodulatory signals of these cells, probably resulting in a partial immunosuppression, which may favour the parasite development in vivo.