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  • 1
    Publication Date: 2023-03-25
    Keywords: Blood cells in G0 - G1 phase, resting cells; Blood cells in S,M or G2 phase, active cells; Breeding stage; Flow cytometry Accuri C6; Head kidney cells in G0 - G1 phase, resting cells; Head kidney cells in S,M or G2 phase, active cells; Identification; Length, total; Lymphocytes in blood; Lymphocytes in head kidney; Lymphocytes in spleen; Monocytes in blood; Monocytes in head kidney; Monocytes in spleen; Ratio; Sex; Species; Spleen cells in G0 - G1 phase, resting cells; Spleen cells in S,M or G2 phase, active cells
    Type: Dataset
    Format: text/tab-separated-values, 6617 data points
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  • 2
    Publication Date: 2023-03-25
    Keywords: Blood cells in G0 - G1 phase, resting cells; Blood cells in S,M or G2 phase, active cells; Condition factor; Eggs; Head kidney cells in G0 - G1 phase, resting cells; Head kidney cells in S,M or G2 phase, active cells; High Throughput PCR, Fluidigm BioMark HD; Identification; Length, standard; Length, total; Life stage; Lymphocytes in blood; Lymphocytes in head kidney; Lymphocytes in spleen; Mass; Monocytes in blood; Monocytes in head kidney; Monocytes in spleen; Number; Origin; Ratio; Sex; Species; Spleen cells in G0 - G1 phase, resting cells; Spleen cells in S,M or G2 phase, active cells; Treatment; Δ threshold cycle, quantitative polymerase chain reaction
    Type: Dataset
    Format: text/tab-separated-values, 2795 data points
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  • 3
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    PANGAEA
    In:  Supplement to: Franke, Andrea; Clemmesen, Catriona; De Schryver, Peter; Garcia-Gonzalez, Linsey; Miest, Joanna; Roth, Olivia (2017): Immunostimulatory effects of dietary poly-ß-hydroxybutyrate in European sea bass postlarvae. Aquaculture Research, https://doi.org/10.1111/are.13393
    Publication Date: 2023-01-13
    Description: The stable production of high quality fry in marine aquaculture is still hampered by unpredictable mortality caused by infectious diseases during larval rearing. Consequently, the development of new biocontrol agents is crucial for a viable aquaculture industry. The bacterial energy storage compound poly-ß-hydroxybutyrate (PHB) has been shown to exhibit beneficial properties on aquatic organisms such as enhanced survival, growth, disease resistance and a controlling effect on the gastrointestinal microbiota. However, the effect of PHB on the developing immune system of fish larvae has so far not been investigated. In the present study, the effect of feeding PHB-enriched Artemia nauplii on survival, growth and immune response in European sea bass (Dicentrarchus labrax) post-larvae was examined. Amorphous PHB was administered to 28 days old sea bass larvae over a period of 10 days. The survival and growth performance were monitored and the expression of 29 genes involved in immunity, growth, metabolism and stress-response was measured. While the expression of the insulin-like growth factor 1 (igf1), an indicator of relative growth, was upregulated in response to feeding PHB, the larval survival and growth performance remained unaffected. After 10 days of PHB treatment, the expression of the antimicrobial peptides dicentracin (dic) and hepcidin (hep) as well as mhc class IIa and mhc class IIb was elevated in the PHB fed larvae. This indicates that PHB is capable of stimulating the immune system of fish early life stages, which may be the cause of the increased resistance to diseases and robustness observed in previous studies.
    Type: Dataset
    Format: application/zip, 3 datasets
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  • 4
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    PANGAEA
    In:  Supplement to: Franke, Andrea; Roth, Olivia; De Schryver, Peter; Bayer, Till; Garcia-Gonzalez, Linsey; Künzel, Sven; Bossier, Peter; Miest, Joanna; Clemmesen, Catriona (2017): Poly-ß-hydroxybutyrate administration during early life: effects on performance, immunity and microbial community of European sea bass yolk-sac larvae. Scientific Reports, 7(1), https://doi.org/10.1038/s41598-017-14785-z
    Publication Date: 2023-01-13
    Description: The reliable production of marine fish larvae is one of the major bottlenecks in aquaculture due to high mortalities mainly caused by infectious diseases. To evaluate if the compound poly-ß-hydroxybutyrate (PHB) might be a suitable immunoprophylactic measure in fish larviculture, its capacity to improve immunity and performance in European sea bass (Dicentrarchus labrax) yolk-sac larvae was explored. Dietary PHB was applied from mouth opening onwards to stimulate the developing larval immune system at the earliest possible point in time. Larval survival, growth, microbiota composition, gene expression profiles and disease resistance were assessed. PHB administration improved larval survival and, furthermore, altered the larva-associated microbiota composition. The bacterial challenge test using pathogenic Vibrio anguillarum revealed that the larval disease resistance was not influenced by PHB. The expression profiles of 26 genes involved e.g. in the immune response showed that PHB affected the expression of the antimicrobial peptides ferritin (fer) and dicentracin (dic), however, the response to PHB was inconsistent and weaker than previously demonstrated for sea bass post-larvae. Hence, the present study highlights the need for more research focusing on the immunostimulation of different early developmental stages for gaining a more comprehensive picture and advancing a sustainable production of high quality fry.
    Type: Dataset
    Format: application/zip, 5 datasets
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  • 5
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    PANGAEA
    In:  Supplement to: Poirier, Maude; Listmann, Luisa; Roth, Olivia (2017): Selection by higher-order effects of salinity and bacteria on early life-stages of Western Baltic spring-spawning herring. Evolutionary Applications, 10(6), 603-615, https://doi.org/10.1111/eva.12477
    Publication Date: 2023-01-13
    Description: Habitat stratification by abiotic and biotic factors initiates divergence of populations and leads to ecological speciation. In contrast to fully marine waters, the Baltic Sea is stratified by a salinity gradient that strongly affects fish physiology, distribution, diversity and virulence of important marine pathogens. Animals thus face the challenge to simultaneously adapt to the concurrent salinity and cope with the selection imposed by the changing pathogenic virulence. Western Baltic spring-spawning herring (Clupea harengus) migrate to spawning grounds characterized by different salinities to which herring are supposedly adapted. We hypothesized that herring populations do not only have to cope with different salinity levels but that they are simultaneously exposed to higher-order effects that accompany the shifts in salinity, i.e. induced pathogenicity of Vibrio bacteria in lower saline waters. To experimentally evaluate this, adults of two populations were caught in their spawning grounds and fully-reciprocally crossed within and between populations. Larvae were reared at three salinity levels, representing the spawning ground salinity of each of the two populations, or Atlantic salinity conditions resembling the phylogenetic origin of Clupea harengus. In addition, larvae were exposed to a Vibrio spp. infection. Life-history traits and gene expression analysis served as response variables. Herring seem adapted to Baltic Sea conditions and cope better with low saline waters. However, upon a bacterial infection, herring larvae suffer more when kept at lower salinities implying reduced resistance against Vibrio or higher Vibrio virulence. In the context of recent climate change with less saline marine waters in the Baltic Sea, such interactions may constitute key future stressors.
    Type: Dataset
    Format: application/zip, 4 datasets
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  • 6
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    PANGAEA
    In:  Supplement to: Wendling, Carolin Charlotte; Piecyk, Agnes; Refardt, Dominik; Chipani, Cynthia; Hertel, Robert; Liesegang, Heiko; Bunk, Boyke; Overmann, Jörg; Roth, Olivia (2017): Tripartite species interaction: Eukaryotic hosts suffer more from phage susceptible than from phage resistant bacteria. BMC Evolutionary Biology, 17(1), https://doi.org/10.1186/s12862-017-0930-2
    Publication Date: 2023-01-13
    Description: Background: Evolutionary shifts in bacterial virulence are often associated with a third biological player, for instance temperate phages, that can act as hyperparasites. By integrating as prophages into the bacterial genome they can contribute accessory genes, which can enhance the fitness of their prokaryotic carrier (lysogenic conversion). Hyperparasitic influence in tripartite biotic interactions has so far been largely neglected in empirical host-parasite studies due to their inherent complexity. Here we experimentally address whether bacterial resistance to phages and bacterial harm to eukaryotic hosts is linked using a natural tri-partite system with bacteria of the genus Vibrio, temperate vibriophages and the pipefish Syngnathus typhle. We induced prophages from all bacterial isolates and constructed a three-fold replicated, fully reciprocal 75x75 phage-bacteria infection matrix. Results: According to their resistance to phages, bacteria could be grouped into three distinct categories: highly susceptible (HS-bacteria), intermediate susceptible (IS-bacteria), and resistant (R-bacteria). We experimentally challenged pipefish with three selected bacterial isolates from each of the three categories and determined the amount of viable Vibrio counts from infected pipefish and the expression of pipefish immune genes. While the amount of viable Vibrio counts did not differ between bacterial groups, we observed a significant difference in relative gene expression between pipefish infected with phage susceptible and phage resistant bacteria. Conclusion: These findings suggest that bacteria with a phage-susceptible phenotype are more harmful against a eukaryotic host, and support the importance of hyperparasitism and the need for an integrative view across more than two levels when studying host-parasite evolution.
    Type: Dataset
    Format: application/zip, 6 datasets
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  • 7
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    PANGAEA
    In:  Supplement to: Beemelmanns, Anne; Poirier, Maude; Bayer, Till; Künzel, Sven; Roth, Olivia (2019): Microbial embryonal colonization during pipefish male pregnancy. Scientific Reports, 9(1), https://doi.org/10.1038/s41598-018-37026-3
    Publication Date: 2023-01-13
    Description: While originally acquired from the environment, a fraction of the microbiota is transferred from parents to offspring. The immune system shapes the microbial colonization, while commensal microbes may boost host immune defences. Parental transfer of microbes in viviparous animals remains ambiguous, as the two transfer routes (transovarial vs. pregnancy) are intermingled within the maternal body. Pipefishes and seahorses (Syngnathids) are ideally suited to disentangle transovarial microbial transfer from a contribution during pregnancy due to their maternal egg production and their unique male pregnancy. We assessed the persistency and the changes in the microbial communities of the maternal and paternal reproductive tracts over proceeding male pregnancy by sequencing microbial 16S rRNA genes of swabs from maternal gonads and brood pouches of non-pregnant and pregnant fathers. Applying parental immunological activation with heat-killed bacteria, we evaluated the impact of parental immunological status on microbial development. Our data indicate that maternal gonads and paternal brood pouches harbor distinct microbial communities, which could affect embryonal development in a sex-specific manner. Upon activation of the immune system, a shift of the microbial community was observed. The activation of the immune system induced the expansion of microbiota richness during late pregnancy, which corresponds to the time point of larval mouth opening, when initial microbial colonization must take place.
    Type: Dataset
    Format: application/zip, 115.5 kBytes
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  • 8
    Publication Date: 2023-01-13
    Keywords: High Throughput PCR, Fluidigm BioMark HD; Identification; Length, standard; Length, total; Life stage; Mass; Organ; Origin; Species; Treatment; Δ threshold cycle, quantitative polymerase chain reaction
    Type: Dataset
    Format: text/tab-separated-values, 5394 data points
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  • 9
    Publication Date: 2023-01-13
    Keywords: Breeding stage; High Throughput PCR, Fluidigm BioMark HD; Identification; Length, total; Sex; Species; Δ threshold cycle, quantitative polymerase chain reaction
    Type: Dataset
    Format: text/tab-separated-values, 5544 data points
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  • 10
    Publication Date: 2023-01-13
    Type: Dataset
    Format: application/zip, 122.3 kBytes
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