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  • 1
    Publication Date: 2013-07-03
    Description: The genetic and morphological development of colorectal cancer is a paradigm for tumorigenesis. However, the dynamics of clonal evolution underpinning carcinogenesis remain poorly understood. Here we identify multipotential stem cells within human colorectal adenomas and use methylation patterns of nonexpressed genes to characterize clonal evolution. Numerous individual crypts from six...
    Print ISSN: 0027-8424
    Electronic ISSN: 1091-6490
    Topics: Biology , Medicine , Natural Sciences in General
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  • 2
    Publication Date: 2016-03-31
    Description: Cerebral cavernous malformations (CCMs) are common inherited and sporadic vascular malformations that cause strokes and seizures in younger individuals. CCMs arise from endothelial cell loss of KRIT1, CCM2 or PDCD10, non-homologous proteins that form an adaptor complex. How disruption of the CCM complex results in disease remains controversial, with numerous signalling pathways (including Rho, SMAD and Wnt/beta-catenin) and processes such as endothelial-mesenchymal transition (EndMT) proposed to have causal roles. CCM2 binds to MEKK3 (refs 7, 8, 9, 10, 11), and we have recently shown that CCM complex regulation of MEKK3 is essential during vertebrate heart development. Here we investigate this mechanism in CCM disease pathogenesis. Using a neonatal mouse model of CCM disease, we show that expression of the MEKK3 target genes Klf2 and Klf4, as well as Rho and ADAMTS protease activity, are increased in the endothelial cells of early CCM lesions. By contrast, we find no evidence of EndMT or increased SMAD or Wnt signalling during early CCM formation. Endothelial-specific loss of Map3k3 (also known as Mekk3), Klf2 or Klf4 markedly prevents lesion formation, reverses the increase in Rho activity, and rescues lethality. Consistent with these findings in mice, we show that endothelial expression of KLF2 and KLF4 is increased in human familial and sporadic CCM lesions, and that a disease-causing human CCM2 mutation abrogates the MEKK3 interaction without affecting CCM complex formation. These studies identify gain of MEKK3 signalling and KLF2/4 function as causal mechanisms for CCM pathogenesis that may be targeted to develop new CCM therapeutics.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4864035/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4864035/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Zhou, Zinan -- Tang, Alan T -- Wong, Weng-Yew -- Bamezai, Sharika -- Goddard, Lauren M -- Shenkar, Robert -- Zhou, Su -- Yang, Jisheng -- Wright, Alexander C -- Foley, Matthew -- Arthur, J Simon C -- Whitehead, Kevin J -- Awad, Issam A -- Li, Dean Y -- Zheng, Xiangjian -- Kahn, Mark L -- P01 HL075215/HL/NHLBI NIH HHS/ -- P01 HL120846/HL/NHLBI NIH HHS/ -- P01 NS092521/NS/NINDS NIH HHS/ -- P01NS092521/NS/NINDS NIH HHS/ -- R01 HL094326/HL/NHLBI NIH HHS/ -- R01HL-084516/HL/NHLBI NIH HHS/ -- R01HL094326/HL/NHLBI NIH HHS/ -- R01NS075168/NS/NINDS NIH HHS/ -- T32HL07439/HL/NHLBI NIH HHS/ -- England -- Nature. 2016 Apr 7;532(7597):122-6. doi: 10.1038/nature17178. Epub 2016 Mar 30.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Medicine and Cardiovascular Institute, University of Pennsylvania, 3400 Civic Center Blvd, Philadelphia, Pennsylvania 19104, USA. ; Laboratory of Cardiovascular Signaling, Centenary Institute, Sydney, New South Wales 2050, Australia. ; Neurovascular Surgery Program, Section of Neurosurgery, Department of Surgery, The University of Chicago Medicine and Biological Sciences, Chicago, Illinois 60637, USA. ; Department of Radiology, University of Pennsylvania Medical Center, 3400 Spruce Street, Philadelphia, Pennsylvania 19104, USA. ; Sydney Microscopy &Microanalysis, University of Sydney, Sydney, New South Wales 2050, Australia. ; Division of Cell Signaling and Immunology, University of Dundee, Dundee DD1 5EH, UK. ; Division of Cardiovascular Medicine and the Program in Molecular Medicine, University of Utah, Salt Lake City, Utah 84112, USA. ; The Key Laboratory for Human Disease Gene Study of Sichuan Province, Institute of Laboratory Medicine, Sichuan Academy of Medical Sciences &Sichuan Provincial People's Hospital, Chengdu, Sichuan 610072, China. ; Faculty of Medicine, Sydney Medical School, University of Sydney, Sydney, New South Wales 2050, Australia.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/27027284" target="_blank"〉PubMed〈/a〉
    Keywords: ADAM Proteins/metabolism ; Animals ; Animals, Newborn ; Carrier Proteins/genetics/metabolism ; Disease Models, Animal ; Endothelial Cells/enzymology/*metabolism ; Female ; Hemangioma, Cavernous, Central Nervous System/etiology/*metabolism/pathology ; Humans ; Kruppel-Like Transcription Factors/deficiency/*metabolism ; MAP Kinase Kinase Kinase 3/deficiency/*metabolism ; *MAP Kinase Signaling System ; Male ; Mice ; Protein Binding ; rho GTP-Binding Proteins/metabolism
    Print ISSN: 0028-0836
    Electronic ISSN: 1476-4687
    Topics: Biology , Chemistry and Pharmacology , Medicine , Natural Sciences in General , Physics
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  • 3
    Publication Date: 1945-01-01
    Print ISSN: 0149-1423
    Electronic ISSN: 1943-2674
    Topics: Geosciences
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  • 4
    Electronic Resource
    Electronic Resource
    Woodbury, NY : American Institute of Physics (AIP)
    Applied Physics Letters 54 (1989), S. 380-382 
    ISSN: 1077-3118
    Source: AIP Digital Archive
    Topics: Physics
    Notes: Highly textured single phase superconducting YBa2Cu3O7−x films have been successfully grown on the yttria-stabilized zirconia (100) substrates by using the metalorganic chemical vapor deposition technique. The as-deposited films grown at 650 °C were homogeneous mixtures of the related metal oxides and carbonates. Subsequent thermal annealing under oxygen flow yielded single phase superconducting films whose thickness corresponded to the deposition rates of approximately 10 μm/h. After the post-annealing the films deposited on the yttria-stabilized zirconia substrates exhibited a highly textured x-ray pattern with c axis perpendicular to the substrate surface. These films show an onset superconducting transition temperature of 93 K with the resistance becoming zero at 84 K.
    Type of Medium: Electronic Resource
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  • 5
    Electronic Resource
    Electronic Resource
    Woodbury, NY : American Institute of Physics (AIP)
    Applied Physics Letters 55 (1989), S. 1258-1260 
    ISSN: 1077-3118
    Source: AIP Digital Archive
    Topics: Physics
    Notes: Superconducting Tl2CaBa2Cu2Oy thin films have been successfully grown on the single-crystal sapphire (11¯02) substrate by using the metalorganic chemical vapor deposition technique. The growth rate of the films was about 5 μm/h. The as-deposited film was post-annealed in a partially sealed ceramic crucible in the presence of a Tl2Ca2Ba2Cu3Oy pellet to achieve the superconducting phase. The x-ray data show strong diffraction from the Tl2CaBa2Cu2Oy superconducting phase in addition to the trace amounts of Ca2CuO3 and BaCO3. Superconducting transition temperatures with onset above 100 K and zero resistance at 94 K can be obtained by further heat treatment at 500 °C in oxygen.
    Type of Medium: Electronic Resource
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  • 6
    Electronic Resource
    Electronic Resource
    Woodbury, NY : American Institute of Physics (AIP)
    Applied Physics Letters 64 (1994), S. 707-709 
    ISSN: 1077-3118
    Source: AIP Digital Archive
    Topics: Physics
    Notes: Gallium arsenide doped with erbium has been grown by molecular beam epitaxy. At growth temperatures in the range 540–605 °C, and with arsenic to gallium flux ratios of 2 and more, the erbium forms uniform crystalline microprecipitates of ErAs when the concentration exceeds 7×1017 cm−3. The diameter can be varied in the range 11–21 A(ring) by altering the growth temperature. Reducing the arsenic to gallium flux ratio to close to stoichiometry changes the growth mode to one yielding quantum wires aligned in the growth direction. Subtle changes in growth conditions lead to bifurcated structures, which we refer to as quantum trees.
    Type of Medium: Electronic Resource
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  • 7
    ISSN: 1089-7550
    Source: AIP Digital Archive
    Topics: Physics
    Notes: The performance of photon detectors based on superconducting tunnel junctions are related to their current - voltage (I-V) curve characteristics and, ultimately, to the quality of the thin tunnel barriers (of order 1 nm) which separate the two superconducting thin films. Both the optimization of the spectroscopic performance of these detectors and the development of a reproducible and high yield fabrication route, require a better understanding of barrier quality and growth techniques. Transmission electron microscopy (TEM) and atomic force microscopy (AFM) provide valuable tools for the investigation of the barrier region and for the control of the quality of the different thin films and related interfaces. In this paper, the results of a TEM and AFM evaluation of Nb-Al-AlOx-Nb tunnel junctions are reported, together with their interpretation on the basis of the I-V curve performance at low temperature (T≥0.3 K). Thickness disuniformities of the Al plus AlOx overlayer and evidence of barrier defects have been found, which may place constraints on the spectroscopic performance of such devices. Through the use of TEM it has also been possible to confirm the epitaxial nature of the Nb base electrode. The junction counter electrode however appears to be polycrystalline, with a columnar morphology and an average grain width of 40 nm. The overall structure of the various layers may well place constraints on the tunneling characteristics of the device. © 1995 American Institute of Physics.
    Type of Medium: Electronic Resource
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  • 8
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    Plant pathology 41 (1992), S. 0 
    ISSN: 1365-3059
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: The effect of disease in two cultivars of barley, sown at different times in two seasons, on the relative importance of stored carbohydrate reserves and current photosynthesis for grain filling was assessed. Three methods of measuring stem reserve contributions to grain filling are reviewed and compared. Disease reduced stem dry weight and the amount of stored carbohydrate in most situations. In contrast, the total amount of stored carbohydrates used for grain filling was often increased by disease. The magnitude of these effects varied with the method used for estimation, and was also different in the crops sown at different times and in different seasons. The estimates of stem reserve contributions to grain filling ranged up to a maximum of 50% in some cases. At least 10 t/ha of reserve material was retranslocated in the healthy 1984 crop studied using 14C pulse feeding, and up to 0.3 t/ha more was utilized in a diseased crop. The effect of disease on the storage and utilization of stem reserves depended on the time of epidemic development, its duration, and the yield potential of the crop. This suggests that crops could be characterized as those which are very sensitive to disease during grain filling, with low stem reserves or high yield potential, and those with lower sensitivity, with more stem reserves or lower yield potential. Such interacting factors could be incorporated in future plant and yield-loss mechanistic models.
    Type of Medium: Electronic Resource
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  • 9
    Electronic Resource
    Electronic Resource
    Oxford, UK : Blackwell Publishing Ltd
    Plant pathology 41 (1992), S. 0 
    ISSN: 1365-3059
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
    Notes: The effect of disease on growth and yield of two barley cultivars sown at different times and in different years was investigated in New Zealand. The data were used to develop yield-loss models based on both disease severity (measured as green leaf area) and yield target (estimated by duration of crop growth). Disease influenced yield differently in Triumph and Sonya barley (spring and winter types, respectively), and yield components were affected to different degrees. Empirical yield-loss models for individual cultivars, sowing dates and seasons had different slope values, and the best models were based on measurements of disease at different growth stages. Combined models were less significant and explained less variation in yield than the individual models. Models which included the duration of crop growth as an estimate of yield target improved the fit to the data. Empirical models were specific to cultivar, sowing date and season, suggesting that they were not applicable in the varying conditions tested. The inclusion of estimated yield target improved the general applicability of models, and provided a method of using models in crops sown at different times and in different seasons, without measuring yield target directly.
    Type of Medium: Electronic Resource
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  • 10
    ISSN: 1089-7550
    Source: AIP Digital Archive
    Topics: Physics
    Notes: Epitaxial Ga2Se3 layers were grown on GaP (100) and GaAs (100) by metal–organic chemical vapor deposition and the heterovalent exchange reaction, respectively. Measurements of the sample reflectance were carried out in the spectral range from 70 to 50 000 cm−1 (∼10 meV−6.2 eV). The dielectric functions in the far infrared were determined from the reflectance measurements and are dominated by strong phonon features of the substrate and the layers. Substrate related multiphonon absorbances and Fabry–Perot interference dominate the mid infrared range. The spectra in the visible spectral range reveal Fabry–Perot interferences up to 2.6 eV indicating a fundamental band gap energy in the blue spectral range in contrast to the previously reported lower value of 2 eV. Further electronic transition energies were observed at 3.9, 4.7, and 5.0 eV. © 1996 American Institute of Physics.
    Type of Medium: Electronic Resource
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