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  • 1
    Monograph available for loan
    Monograph available for loan
    Boston [u.a.] : Kluwer
    Call number: PIK B 160-01-0624
    Type of Medium: Monograph available for loan
    Pages: 400 p.
    ISBN: 0792379608
    Location: A 18 - must be ordered
    Branch Library: PIK Library
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  • 2
    Publication Date: 2023-01-13
    Description: Correctly determining species' identity is critical for estimating biodiversity and effectively managing marine populations, but is difficult for species that have few morphological traits or are highly plastic. The advancement of molecular tools has begun to uncover cryptic species within groups that are phenotypically indistinguishable. Sponges are considered a taxonomically difficult group because they lack multiple consistent diagnostic features, which coupled with their common phenotypic plasticity, makes the presence of species complexes likely, but difficult to detect. Here, we investigated the evolutionary relationship of Tethya spp. in central New Zealand using both molecular and morphological techniques to highlight the potential for cryptic speciation in sponges. Phylogenetic reconstructions based on three markers (rnl, COI-ext, 18S) revealed three genetic clades, with one clade representing T. bergquistae and two clades belonging to what was a priori thought to be a single species, T. burtoni. Eleven microsatellite markers were also used to further resolve the T. burtoni group, revealing a division consistent with the 18S and rnl data. Morphological analysis based on spicule characteristics allowed T. bergquistae to be distinguished from T. burtoni, but revealed no apparent differences between the T. burtoni clades. Here, we highlight hidden genetic diversity within T. burtoni, likely representing a group consisting of incipient species that have recently undergone speciation but have yet to express skeletal differences. Our study demonstrates that cryptic speciation in sponges may go undetected and diversity underestimated when using only morphology-based taxonomy, which has broad scale implications for conservation and management of marine systems.
    Type: Dataset
    Format: application/vnd.openxmlformats-officedocument.spreadsheetml.sheet, 14.8 kBytes
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  • 3
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    PANGAEA
    In:  Supplement to: Staunton, Kyran M; Nakamura, Akihiro; Burwell, Chris J; Robson, Simon K A; Williams, Stephen E (2016): Elevational Distribution of Flightless Ground Beetles in the Tropical Rainforests of North-Eastern Australia. PLoS ONE, 11(5), e0155826, https://doi.org/10.1371/journal.pone.0155826
    Publication Date: 2023-01-13
    Description: Understanding how the environment influences patterns of diversity is vital for effective conservation management, especially in a changing global climate. While assemblage structure and species richness patterns are often correlated with current environmental factors, historical influences may also be considerable, especially for taxa with poor dispersal abilities. Mountain-top regions throughout tropical rainforests can act as important refugia for taxa characterised by low dispersal capacities such as flightless ground beetles (Carabidae), an ecologically significant predatory group. We surveyed flightless ground beetles along elevational gradients in five different subregions within the Australian Wet Tropics World Heritage Area to investigate (1) whether the diversity and composition of flightless ground beetles are elevationally stratified, and, if so, (2) what environmental factors (other than elevation per se) are associated with these patterns. Generalised linear models and model averaging techniques were used to relate patterns of diversity to environmental factors. Unlike most taxonomic groups, flightless ground beetles increased in species richness and abundance with elevation. Additionally, each subregion consisted of distinct assemblages containing a high level of regional endemic species. Species richness was most strongly positively associated with the historical climatic conditions and negatively associated with severity of recent disturbance (treefalls) and current climatic conditions. Assemblage composition was associated with latitude and current and historical climatic conditions. Our results suggest that distributional patterns of flightless ground beetles are not only likely to be associated with factors that change with elevation (current climatic conditions), but also factors that are independent of elevation (recent disturbance and historical climatic conditions). Variation in historical vegetation stability explained both species richness and assemblage composition patterns, probably reflecting the significance of upland refugia at a geographic time scale. These findings are important for conservation management as upland habitats are under threat from climate change.
    Keywords: Australia; Castelnaudia obscuripennis; Castelnaudia setosiceps; Castelnaudia sp.; Coptocarpus; Coptocarpus philipi; Craspedophorus sp.; Feronista sp.; Identification; Laccopterum sp.; LATITUDE; Lecanomerus limbatus; Lecanomerus niger; Lecanomerus sp.; Leiradira; Leiradira alternans; Leiradira alticola; Leiradira opacistiatus; Leiradira soror; LONGITUDE; Mecyclothorax storeyi; Mystropomus regularis; NE_Australia; Notonomus; Notonomus dimorphicus; Notonomus doddi; Notonomus flos; Notonomus masculinus; Notonomus montellus; Notonomus montorum; Notonomus spurgeoni; Oodes sp.; Pamborus euopacus; Pamborus punctatus; Pamborus tropicus; Pheropsophus verticalis; Pitfall trap; Prosopogmus sp.; PTRAP; Setalis rubripes; Trichosternus fax; Trichosternus frater; Trichosternus montorum; Trichosternus mutatus; Trichosternus nudipes; Trichosternus soror
    Type: Dataset
    Format: text/tab-separated-values, 3036 data points
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  • 4
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    PANGAEA
    In:  Supplement to: Zhao, Meixun; Eglinton, Geoffrey; Haslett, Simon K; Jordan, Richard William; Sarnthein, Michael; Zhang, Zhaohui (2000): Marine and terrestrial biomarker records for the last 35,000 years at ODP site 658C off NW Africa. Organic Geochemistry, 31(9), 919-930, https://doi.org/10.1016/S0146-6380(00)00027-9
    Publication Date: 2024-01-09
    Description: Several high-resolution proxy environmental records have been obtained for the last 35 kyr from ODP Hole 658C, a well-studied site ca. 200 km off Cap Blanc, NW Africa. The collective assessment based on the marine proxies (UK'37 SST, contents of TOC and chlorins, Upwelling Radiolarian Index and the percentage of Florisphaera profunda), surprisingly indicates that the last glacial maximum (LGM) was characterized by warmer sea surface temperature (SST), weaker upwelling, and lower marine productivity, compared with the preceding older glacial and subsequent deglaciation periods. Of the terrigenous proxies, the mean grain size of the non-carbonate fraction and the terrigenous alkane content indicate that wind strength and aridity were high. The weaker upwelling at the 658 site during the LGM may have resulted from changes in the strength and direction of the wind systems and/or shifts in the position and geometry of the upwelling cell.
    Keywords: 108-658C; AGE; Age, maximum/old; Age, minimum/young; Calculated from UK'37 (Prahl et al., 1988); Canarias Sea; Carbon, organic, total; Carbon, organic, total, maximum; Carbon, organic, total, minimum; Chlorins; DRILL; Drilling/drill rig; Epoch; Florisphaera profunda; Grain size, mean; Joides Resolution; Leg108; n-Alkane, total per unit sediment mass; n-Alkane C29, δ13C; Ocean Drilling Program; ODP; Sea surface temperature, annual mean; Terrigenous; Upwelling radiolarian index
    Type: Dataset
    Format: text/tab-separated-values, 150 data points
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  • 5
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    PANGAEA
    In:  Supplement to: Gibbin, Emma M; Davy, Simon K (2014): The photo-physiological response of a model cnidarian–dinoflagellate symbiosis to CO2-induced acidification at the cellular level. Journal of Experimental Marine Biology and Ecology, 457, 1-7, https://doi.org/10.1016/j.jembe.2014.03.015
    Publication Date: 2024-03-15
    Description: We measured the relationship between CO2-induced seawater acidification, photo-physiological performance and intracellular pH (pHi) in a model cnidarian-dinoflagellate symbiosis - the sea anemone Aiptasia sp. -under ambient (289.94 ± 12.54 µatm), intermediate (687.40 ± 25.10 µatm) and high (1459.92 ± 65.51 µatm) CO2 conditions. These treatments represented current CO2 levels, in addition to CO2 stabilisation scenarios IV and VI provided by the Intergovernmental Panel on Climate Change (IPCC). Anemones were exposed to each treatment for two months and sampled at regular intervals. At each time-point we measured a series of physiological responses: maximum dark-adapted fluorescent yield of PSII (Fv/Fm), gross photosynthetic rate, respiration rate, symbiont population density, and light-adapted pHi of both the dinoflagellate symbiont and isolated host anemone cell. We observed increases in all but one photo-physiological parameter (Pgross:R ratio). At the cellular level, increases in light-adapted symbiont pHi were observed under both intermediate and high CO2 treatments, relative to control conditions (pHi 7.35 and 7.46 versus pHi 7.25, respectively). The response of light-adapted host pHi was more complex, however, with no change observed under the intermediate CO2 treatment, but a 0.3 pH-unit increase under the high CO2 treatment (pHi 7.19 and 7.48, respectively). This difference is likely a result of a disproportionate increase in photosynthesis relative to respiration at the higher CO2 concentration. Our results suggest that, rather than causing cellular acidosis, the addition of CO2 will enhance photosynthetic performance, enabling both the symbiont and host cell to withstand predicted ocean acidification scenarios.
    Keywords: Aiptasia pulchella; Alkalinity, total; Alkalinity, total, standard error; Animalia; Aragonite saturation state; Benthic animals; Benthos; Bicarbonate ion; Bicarbonate ion, standard error; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Cnidaria; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Gross photosynthesis/respiration ratio; Gross photosynthesis/respiration ratio, standard error; Gross photosynthesis rate, oxygen; Gross photosynthesis rate, oxygen, per cell; Gross photosynthesis rate, oxygen, standard error; Incubation duration; Laboratory experiment; Laboratory strains; Maximum photochemical quantum yield of photosystem II; Maximum photochemical quantum yield of photosystem II, standard error; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard error; pH; pH, intracellular; pH, intracellular, standard error; pH, standard error; Potentiometric; Primary production/Photosynthesis; Respiration; Respiration rate, oxygen; Respiration rate, oxygen, standard error; Salinity; Single species; South Pacific; Species; Symbiont cell density; Symbiont cell density, standard error; Temperature, water; Temperature, water, standard error
    Type: Dataset
    Format: text/tab-separated-values, 702 data points
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  • 6
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    PANGAEA
    In:  Supplement to: Gibbin, Emma M; Putnam, H M; Davy, Simon K; Gates, Ruth D (2014): Intracellular pH and its response to CO2-driven seawater acidification in symbiotic versus non-symbiotic coral cells. Journal of Experimental Biology, 217(11), 1963-1969, https://doi.org/10.1242/jeb.099549
    Publication Date: 2024-03-15
    Description: Regulating intracellular pH (pHi) is critical for optimising the metabolic activity of corals, yet mechanisms involved in pH regulation and the buffering capacity within coral cells are not well understood. Our study investigated how the presence of symbiotic dinoflagellates affects the response of pHi to pCO2-driven seawater acidification in cells isolated from Pocillopora damicornis. Using the fluorescent dye BCECF-AM, in conjunction with confocal microscopy, we simultaneously characterised the response of pHi in host coral cells and their dinoflagellate symbionts, in symbiotic and non-symbiotic states under saturating light, with and without the photosynthetic inhibitor DCMU. Each treatment was run under control (pH 7.8) and CO2 acidified seawater conditions (decreasing pH from 7.8 - 6.8). After two hours of CO2 addition, by which time the external pH (pHe) had declined to 6.8, the dinoflagellate symbionts had increased their pHi by 0.5 pH units above control levels. In contrast, in both symbiotic and non-symbiotic host coral cells, 15 min of CO2 addition (0.2 pH unit drop in pHe) led to cytoplasmic acidosis equivalent to 0.4 pH units. Despite further seawater acidification over the duration of the experiment, the pHi of non-symbiotic coral cells did not change, though in host cells containing a symbiont cell the pHi recovered to control levels. This recovery was negated when cells were incubated with DCMU. Our results reveal that photosynthetic activity of the endosymbiont is tightly coupled with the ability of the host cell to recover from cellular acidosis after exposure to high CO2 / low pH.
    Keywords: Acid-base regulation; Alkalinity, total; Alkalinity, total, standard error; Animalia; Aragonite saturation state; Benthic animals; Benthos; Bicarbonate ion; Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Cnidaria; Coast and continental shelf; Containers and aquaria (20-1000 L or 〈 1 m**2); Figure; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Laboratory experiment; North Pacific; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; pH, extracellular; pH, intracellular; pH, standard error; pH change; Pocillopora damicornis; Replicate; Salinity; Salinity, standard error; Single species; Species; Temperature, water; Temperature, water, standard error; Time in minutes; Treatment; Tropical
    Type: Dataset
    Format: text/tab-separated-values, 3840 data points
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  • 7
    ISSN: 1520-510X
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 8
    ISSN: 1520-510X
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 9
    Electronic Resource
    Electronic Resource
    s.l. : American Chemical Society
    Journal of natural products 50 (1987), S. 1025-1040 
    ISSN: 1520-6025
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 10
    Electronic Resource
    Electronic Resource
    Springer
    Marine biology 25 (1974), S. 335-337 
    ISSN: 1432-1793
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Larvae and unfertilized eggs of the California sea star Patiria miniata (Brandt) were exposed to 3 stains: Nile Blue Sulfate, Neutral Red and Rhodamine B. Concentration of the stains was 5 or 10 ppm, and length of exposure 5, 10 or 20 min. None of the stains were toxic, and Nile Blue Sulfate was found to be the best tested for retention of stain over long periods of time. This method is suggested for studies of development, growth, survival and dispersal of sea-star larvae in the plankton and in laboratory studies.
    Type of Medium: Electronic Resource
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