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  • American Physical Society  (663,490)
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  • 11
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    Dynamical mechanism of antifreeze proteins to prevent ice growth (2014)
    American Physical Society
    In:  EPIC3Physical Review E, American Physical Society, 90, pp. 022711-1, ISSN: 1539-3755
    Details
    Publication Date: 2014-11-04
    Description: The fascinating ability of algae, insects, and fishes to survive at temperatures below normal freezing is realized by antifreeze proteins (AFPs). These are surface-active molecules and interact with the diffusive water-ice interface thus preventing complete solidification. We propose a dynamical mechanism on how these proteins inhibit the freezing of water. We apply a Ginzburg-Landau-type approach to describe the phase separation in the two-component system (ice, AFP). The free-energy density involves two fields: one for the ice phase with a low AFP concentration and one for liquid water with a high AFP concentration. The time evolution of the ice reveals microstructures resulting from phase separation in the presence of AFPs. We observed a faster clustering of pre-ice structure connected to a locking of grain size by the action of AFP, which is an essentially dynamical process. The adsorption of additional water molecules is inhibited and the further growth of ice grains stopped. The interfacial energy between ice and water is lowered allowing the AFPs to form smaller critical ice nuclei. Similar to a hysteresis in magnetic materials we observe a thermodynamic hysteresis leading to a nonlinear density dependence of the freezing point depression in agreement with the experiments.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 12
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    Stable coexistence in a Lotka-Volterra model with heterogeneous resources and intraguild predation (2013)
    American Physical Society
    In:  EPIC3Physical Review E, American Physical Society, 88(6), ISSN: 1539-3755
    Details
    Publication Date: 2018-02-16
    Description: In this study we model population dynamics in a three-species food web with heterogeneous resources and intraguild predation by using a nonspatial Lotka-Volterra system with a density-dependent interaction of resource items. The model consists of two predators with an intraguild predation (IGP) relation competing for a common resource. The resource is subdivided into subpopulations of different quality that are distinguished by grazing rates of the two predators, contact rates between subpopulations and mortality rates. The proposed system describes an exchange of traits between species from distinct subpopulations by using a species interaction term. In particular, we examine the percentage of stable coexistence solutions versus resource carrying capacity and contact rates between distinct resource pools. We also present a numerical comparison of the percentage of stable food webs found for different numbers of subpopulations. While at high enrichment no stable coexistence was found in the IGP system with a single resource, our model predicts a stable coexistence of two IGP-related predators and resources at high and intermediate enrichment already at a low contact rate between subpopulations.
    Repository Name: EPIC Alfred Wegener Institut
    Type: Article , isiRev
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  • 13
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    Pond fractals in a tidal flat (2015)
    American Physical Society
    Details
    Publication Date: 2022-05-25
    Description: © The Author(s), 2015. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Physical Review E Statistical, Nonlinear, and Soft Matter Physics 92 (2015): 052128, doi: 10.1103/PhysRevE.92.052128.
    Description: Studies over the past decade have reported power-law distributions for the areas of terrestrial lakes and Arctic melt ponds, as well as fractal relationships between their areas and coastlines. Here we report similar fractal structure of ponds in a tidal flat, thereby extending the spatial and temporal scales on which such phenomena have been observed in geophysical systems. Images taken during low tide of a tidal flat in Damariscotta, Maine, reveal a well-resolved power-law distribution of pond sizes over three orders of magnitude with a consistent fractal area-perimeter relationship. The data are consistent with the predictions of percolation theory for unscreened perimeters and scale-free cluster size distributions and are robust to alterations of the image processing procedure. The small spatial and temporal scales of these data suggest this easily observable system may serve as a useful model for investigating the evolution of pond geometries, while emphasizing the generality of fractal behavior in geophysical surfaces.
    Description: This material is based upon work supported by the National Science Foundation Graduate Research Fellowship Program under Grant No. 2388357, the Gordon and Betty Moore Foundation, and the National Science Foundation, Award No. OCE-1315201.
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 14
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    Entropy-driven formation of a chiral liquid-crystalline phase of helical filaments (2006)
    American Physical Society
    Details
    Publication Date: 2022-05-25
    Description: Author Posting. © The Authors, 2006. This article is posted here by permission of American Physical Society for personal use, not for redistribution. The definitive version was published in Physical Review Letters 96 (2006): 018305, doi:10.1103/PhysRevLett.96.018305.
    Description: We study the liquid-crystalline phase behavior of a concentrated suspension of helical flagella isolated from Salmonella typhimurium. Flagella are prepared with different polymorphic states, some of which have a pronounced helical character while others assume a rodlike shape. We show that the static phase behavior and dynamics of chiral helices are very different when compared to simpler achiral hard rods. With increasing concentration, helical flagella undergo an entropy-driven first order phase transition to a liquid-crystalline state having a novel chiral symmetry.
    Description: M. S. and R. O. are supported by NIH Grant No. EB002583.
    Keywords: Entropy ; Molecular biophysics ; Liquid crystal phase transformations ; Symmetry ; Chirality
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: 765344 bytes
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  • 15
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    Spintronics-compatible approach to solving maximum satisfiability problems with probabilistic computing, invertible logic and parallel tempering (2023)
    American Physical Society
    Details
    Publication Date: 2023-02-22
    Description: 7 Figures, 20 pages
    Description: The search of hardware-compatible strategies for solving NP-hard combinatorial optimization problems (COPs) is an important challenge of today s computing research because of their wide range of applications in real world optimization problems. Here, we introduce an unconventional scalable approach to face maximum satisfiability problems (Max-SAT) which combines probabilistic computing with p-bits, parallel tempering, and the concept of invertible logic gates. We theoretically show the spintronic implementation of this approach based on a coupled set of Landau-Lifshitz-Gilbert equations, showing a potential path for energy efficient and very fast (p-bits exhibiting ns time scale switching) architecture for the solution of COPs. The algorithm is benchmarked with hard Max-SAT instances from the 2016 Max-SAT competition (e.g., HG-4SAT-V150-C1350-1.cnf which can be described with 2851 p-bits), including weighted Max-SAT and Max-Cut problems.
    Description: Published
    Description: 024052
    Description: 3IT. Calcolo scientifico
    Description: JCR Journal
    Keywords: Physics - Mesoscopic Systems and Quantum Hall Effect; Physics - Mesoscopic Systems and Quantum Hall Effect
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: article
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  • 16
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    Flow-driven branching in a frangible porous medium (2020)
    American Physical Society
    Details
    Publication Date: 2022-05-26
    Description: © The Author(s), 2020. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Derr, N. J., Fronk, D. C., Weber, C. A., Mahadevan, A., Rycroft, C. H., & Mahadevan, L. Flow-driven branching in a frangible porous medium. Physical Review Letters, 125(15), (2020): 158002, doi:10.1103/PhysRevLett.125.158002.
    Description: Channel formation and branching is widely seen in physical systems where movement of fluid through a porous structure causes the spatiotemporal evolution of the medium. We provide a simple theoretical framework that embodies this feedback mechanism in a multiphase model for flow through a frangible porous medium with a dynamic permeability. Numerical simulations of the model show the emergence of branched networks whose topology is determined by the geometry of external flow forcing. This allows us to delineate the conditions under which splitting and/or coalescing branched network formation is favored, with potential implications for both understanding and controlling branching in soft frangible media.
    Description: N. D. was partially supported by the NSF-Simons Center for Mathematical and Statistical Analysis of Biology at Harvard, Grant No. 1764269, and the Harvard Quantitative Biology Initiative. C. H. R. and N. D. were partially supported by the National Science Foundation under Grant No. DMS-1753203. C. H. R. was partially supported by the Applied Mathematics Program of the U.S. DOE Office of Science Advanced Scientific Computing Research under Contract No. DE-AC02-05CH11231. L. M. was partially supported by the National Science Foundation under Grants No. DMR-2011754 and No. DMR-1922321.
    Repository Name: Woods Hole Open Access Server
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  • 17
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    Linking the Langevin equation to scaling properties of space plasma turbulence at sub-ion scales (2024)
    American Physical Society
    Details
    Publication Date: 2024-04-30
    Description: Current understanding of the kinetic-scale turbulence in weakly collisional plasmas still remains elusive. We employ a general framework in which the turbulent energy transfer is envisioned as a scale-to-scale Langevin process. Fluctuations in the sub-ion range show a global scale invariance, thus suggesting a homogeneous energy repartition. In this Letter, we interpret such a feature by linking the drift term of the Langevin equation to scaling properties of fluctuations. Theoretical expectations are verified on solar wind observations and numerical simulations, thus giving relevance to the proposed framework for understanding kinetic-scale turbulence in space plasmas.
    Description: Published
    Description: L042014
    Description: OSA3: Climatologia e meteorologia spaziale
    Description: JCR Journal
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: article
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  • 18
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    Search for decays ofB0mesons intoe+e−,μ+μ−ande±μ∓final states (2008)
    American Physical Society
    Details
    Publication Date: 2008-02-29
    Print ISSN: 1550-7998
    Electronic ISSN: 1550-2368
    Topics: Physics
    Published by American Physical Society
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  • 19
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    Cosmic strings from supersymmetric flat directions (2008)
    American Physical Society
    Details
    Publication Date: 2008-02-28
    Print ISSN: 1550-7998
    Electronic ISSN: 1550-2368
    Topics: Physics
    Published by American Physical Society
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  • 20
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    Supersymmetric QCD vacua and geometrical engineering (2008)
    American Physical Society
    Details
    Publication Date: 2008-02-26
    Print ISSN: 1550-7998
    Electronic ISSN: 1550-2368
    Topics: Physics
    Published by American Physical Society
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