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  • Books  (106)
  • Articles  (5,754,445)
  • Biology  (5,754,551)
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  • Books  (106)
  • Journals  (5,027)
  • Articles  (5,754,445)
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  • 1
    Keywords: hydrocarbon ; Oil reservoir ; corrosion ; Enhanced Oil Recovery ; methanogenesis ; biosurfactants ; Biodesulfurization ; Energy ; petroleum biotechnology ; Biodegradation
    Description / Table of Contents: Petroleum hydrocarbons are both a product of, and rich substrate for, microorganisms from across all Domains of life. Rooted deeply in the history of microbiology, hydrocarbons have been studied as sources of carbon and energy for microorganisms for over a century. As global demand for petroleum and its refined products continues to rise, so do challenges associated with environmental pollution, oil well souring, infrastructure corrosion, oil recovery, transport, refining, and upgrading of heavy crude oils and bitumens. Advances in genomics, synthetic biology and metabolic engineering has invigorated interest in petroleum microbial biotechnology as interest grows in technologies for in situ methane production, biodesulfurization and biodenitrogenation, bio-upgrading of heavy crudes, microbial enhanced oil recovery, corrosion control, and biocatalysts for generating value-added products. Given the complexity of the global petroleum industry and the harsh conditions in which it operates, a deeper understanding of the ecophysiology of aerobic and anaerobic microbial communities that have associations with petroleum hydrocarbons is needed if robust technologies are to be deployed successfully. This research topic highlights recent advances in microbial enhanced oil recovery, methanogenic hydrocarbon metabolism and carbon dioxide sequestration, bioremediation, microbiologically influenced corrosion, biodesulfurization, and the application of metagenomics to better understand microbial communities associated with petroleum hydrocarbons.
    Pages: Online-Ressource (234 Seiten)
    ISBN: 9782889452569
    Language: English
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  • 2
    Keywords: Geomicrobiology ; deep biosphere ; IODP ; ocean crust ; iron oxidation ; sulfate reduction ; hydrothermal vents
    Description / Table of Contents: Igneous oceanic crust is one of the largest potential habitats for life on earth, and microbial activity supported by rock-water-microbe reactions in this environment can impact global biogeochemical cycles. However, our understanding of the microbiology of this system, especially the subsurface “deep biosphere” component of it, has traditionally been limited by sample availability and quality. Over the past decade, several major international programs (such as the Center for Dark Energy Biosphere Investigations, the current International Ocean Discovery Program and its predecessor Integrated Ocean Drilling Program, and the Deep Carbon Observatory) have focused on advancing our understanding of life in this cryptic, yet globally relevant, biosphere. Additionally, many field and laboratory research programs are examining hydrothermal vent systems –a seafloor expression of seawater that has been thermally and chemically altered in subseafloor crust – and the microbial communities supported by these mineral-rich fluids. The Frontiers in Microbiology 3 September 2017 | Recent Advances in Geomicrobiology of the Ocean Crust papers in this special issue bring together recent discoveries of microbial presence, diversity and activity in these dynamic ocean environments. Cumulatively, the articles in this special issue serve as a tribute to the late Dr. Katrina J. Edwards, who was a pioneer and profound champion of studying microbes that “rust the crust”. This special issue volume serves as a foundation for the continued exploration of the subsurface ocean crust deep biosphere.
    Pages: Online-Ressource (326 Seiten)
    ISBN: 9782889452835
    Language: English
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  • 3
    Unknown
    Lausanne : Frontiers
    Keywords: Terrestrial deep biosphere ; Eukaryotes ; Groundwater ; microbiome ; Heavy metal resistance ; MINE ; Nitrogen Cycle ; Iron oxidation ; Methane ; cave
    Description / Table of Contents: The deep subsurface is, in addition to space, one of the last unknown frontiers to human kind. A significant part of life on Earth resides in the deep subsurface, hiding great potential of microbial life of which we know only little. The conditions in the deep terrestrial subsurface are thought to resemble those of early Earth, which makes this environment an analog for studying early life in addition to possible extraterrestrial life in ultra-extreme conditions. Early microorganisms played a great role in shaping the conditions on the young Earth. Even today deep subsurface microorganisms interact with their geological environment transforming the conditions in the groundwater and on rock surfaces. Essential elements for life are richly present but in difficultly accessible form. The elements driving the microbial deep life is still not completely identified. Most of the microorganisms detected by novel molecular techniques still lack cultured representatives. Nevertheless, using modern sequencing techniques and bioinformatics the functional roles of these microorganisms are being revealed. We are starting to see the differences and similarities between the life in the deep subsurface and surface domains. We may even begin to see the function of evolution by comparing deep life to life closer to the surface of Earth. Deep life consists of organisms from all known domains of life. This Research Topic reveals some of the rich diversity and functional properties of the great biomass residing in the deep dark subsurface.
    Pages: Online-Ressource (141 Seiten)
    ISBN: 9782889451791
    Language: English
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  • 4
    Unknown
    New York, NY : Humana Press
    Keywords: Life sciences ; Bioinformatics ; Life Sciences ; Bioinformatics
    Description / Table of Contents: Primer on Ontologies --- The Gene Ontology and the Meaning of Biological Function --- Primer on the Gene Ontology --- Best Practices in Manual Annotation with the Gene Ontology --- Computational Methods for Annotation Transfers from Sequence --- Text Mining to Support Gene Ontology Curation and Vice Versa --- How Does the Scientific Community Contribute to Gene Ontology? --- Evaluating Computational Gene Ontology Annotations --- Evaluating Functional Annotations of Enzymes Using the Gene Ontology --- Community-Based Evaluation of Computational Function Prediction --- Get GO!: Retrieving GO Data Using AmiGO, QuickGO, API, Files, and Tools --- Semantic Similarity in the Gene Ontology --- Gene-Category Analysis --- Gene Ontology: Pitfalls, Biases, and Remedies --- Visualizing GO Annotations --- A Gene Ontology Tutorial in Python --- Annotation Extensions --- The Evidence and Conclusion Ontology (ECO): Supporting GO Annotations --- Complementary Sources of Protein Functional Information: The Far Side of GO --- Integrating Bio-Ontologies and Controlled Clinical Terminologies: From Base Pairs to Bedside Phenotypes --- The Vision and Challenges of the Gene Ontology
    Pages: Online-Ressource (XII, 305 pages) , 56 illustrations, 50 illustrations in color
    ISBN: 9781493937431
    Language: English
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  • 5
    Unknown
    Warsaw, Berlin : De Gruyter Open
    Keywords: anthropocene ; non equilibrium thermodynamics ; life structure
    Description / Table of Contents: Introduction --- 1 The Visible Universe Starts With – Believe It or Not – Correlation --- 2 Correlation=Differentiation=Order --- 3 Some Basic Characteristics of this Ordering Process as Thus Conceived --- 4 Hierarchy and Emergence Theories --- 5 Causation --- 6 The Arrow of Time --- 7 Complexity --- 8 Life --- 9 Energy --- 10 Globalization (Make It or Break It) --- 11 Ethics, Thermodynamics, and The Anthropocene --- Appendix A: Note on Ontology and Epistemology --- Appendix B: A Selection of Human Social Conventions Which Favor Cooperative, and Thus Correlated, or Coordinated, Behavior --- Appendix C: Quantitative Wikis For Energy Supply and Distribution Modeling
    Pages: Online-Ressource (VI, 130 Seiten)
    ISBN: 9783110567304
    Language: English
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  • 6
    Keywords: Life sciences ; Developmental biology ; Evolutionary biology ; Animal genetics ; Entomology ; Biomathematics ; Life Sciences ; Animal Genetics and Genomics ; Evolutionary Biology ; Mathematical and Computational Biology ; Developmental Biology ; Entomology
    Description / Table of Contents: Foreword --- Preface --- Contributors --- Part I. The Nympalid Groundplan (NGP) and Diversification --- Chapter1:The common developmental origin of eyespots and parafocal elements;And a new model-mechanism for color pattern formation --- Chapter2:Exploring color pattern diversification in early lineages of Satyrinae (Nymphalidae) --- Chapter3:Camouflage variation on a theme of the Nymphalid Ground Plan --- Chapter4:Morphological evolution repeatedly caused by mutations in signaling ligand genes --- Part II. Eyespots and Evolution --- Chapter5:Physiology and evolution of wing pattern plasticity in Bicyclus butterflies: a critical review ofthe literature --- Chapter6:Spatial variation in boundary conditions can govern selection and location of eyespots inbutterfly wings --- Chapter7:Self-Similarity, Distortion Waves, and the Essence of Morphogenesis: A Generalized View ofColor Pattern Formation in Butterfly Wings --- Part III. Developmental Genetics --- Chapter8:A practical guide to CRISPR/Cas9 genome editing in Lepidoptera --- Chapter9:What can we learn about adaptation from the wing pattern genetics of Heliconiusbutterflies? --- Chapter10:Molecular mechanism and evolutionary process underlying female-limited Batesian mimicry in Papilio polytes --- Part IV. Ecological Aspects and Adaptation --- Chapter11:Chemical Ecology of Poisonous Butterflies: Model or Mimic?— A Paradox of Sexual Dimorphisms in Müllerian Mimicry --- Chapter12:A model for population dynamics of the mimetic butterfly Papilio polytesin Sakishima Islands, Japan (II) --- Chapter13:Evolutionary trends in phenotypic elements of seasonal forms of the tribe Junoniini(Lepidoptera: Nymphalidae) --- Chapter14:Estimating the mating success of male butterflies in the field.-Part V. Color Patterns of Larva and Other Insects --- Chapter15:Molecular Mechanisms of Larval Color Pattern Switch in the Swallowtail Butterfly --- Chapter16:Drosophila guttifera as a model system for elucidating color pattern formation --- Chapter17:Molecular mechanisms underlying color vision and color formation in dragonflies
    Pages: Online-Ressource (XII, 321 pages) , 103 illustrations, 89 illustrations in color
    ISBN: 9789811049569
    Language: English
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  • 7
    Keywords: Life sciences ; Cell biology ; Developmental biology ; Plant science ; Botany ; Life Sciences ; Developmental Biology ; Plant Sciences ; Cell Biology
    Description / Table of Contents: Part 1 Sperm Attraction, Activation and Acrosome Reaction --- 1 Sperm Chemotaxis: The First Authentication Events Between Conspecific Gametes Prior to Fertilization (Manabu Yoshida) --- 2 Respiratory CO2 Mediates Sperm Chemotaxis in Squids (Noritaka Hirohashi) --- 3 Specific Mechanism of Sperm Storage in Avian Oviducts (Tomohiro Sasanami) --- 4 Allurin: Exploring the Activity of a Frog Sperm Chemoattractant in Mammals (Douglas E. Chandler) --- 5 Structure, Function and Phylogenetic Consideration of Calaxin (Kazuo Inaba) --- 6 Cl- Channels and Transporters in Sperm Physiology (Alberto Darszon) --- 7 Equatorin-related Subcellular and Molecular Events During Sperm Priming for Fertilization in Mice (Kiyotaka Toshimori) --- 8 Acrosome Reaction-mediated Motility Initiation that is Critical for the Internal Fertilization of Urodele Amphibians (Akihiko Watanabe) --- 9 Analysis of the Mechanism that Brings Protein Disulfide Isomerase-P5 to Inhibit Oxidative Refolding of Lysozyme (Miho Miyakawa) --- Part 2 Gametogenesis, Gamete Recognition, Activation, and Evolution --- 10 Effect of Relaxin-like Gonad-Stimulating Substance (GSS) on Gamete Shedding and 1-Methyladenine Production in Starfish Ovaries (Masatoshi Mita) --- 11 Incapacity of 1-Methyladenine Production to Relaxin-like Gonad-Stimulating Substance (GSS) in Ca2+-free Seawater-treated Starfish Ovarian Follicle Cells (Masatoshi Mita) --- 12 Novel Isoform of Vitellogenin Expressed in Eggs is a Binding Partner of the Sperm Proteases, HrProacrosin and HrSermosin, in the Ascidian Halocynthia roretzi (Hitoshi Sawada) --- 13 Actin Cytoskeleton and Fertilization in Starfish Eggs (Luigia Santella) --- 14 Focused Proteomics on Egg Membrane Microdomains to Elucidate the Cellular and Molecular Mechanisms of Fertilization in the African Clawed Frog Xenopus laevis (Ken-ichi Sato) --- 15 Egg Activation in Polyspermy: Its Molecular Mechanisms and Evolution in Vertebrates (Yasuhiro Iwao ) --- 16 ATP Imaging in Xenopus laevis Oocyte (Takashi Ijiri) --- 17 Mitochondrial Activation and Nitric Oxide (NO) Release at Fertilization in Echinoderm Eggs (Tatsuma Mohri) --- 18 Functional Roles of Spe Genes in the Male Germline During Reproduction of Caenorhabditis elegans (Hitoshi Nishimura) --- 19 Origin of Female/Male Gender as Deduced by the Mating Type Loci of the Colonial Volvocalean Greens (Hisayoshi Nozaki) --- Part 3 Allorecognition in Male–Female Interaction --- 20 Allorecognition and Lysin Systems During Ascidian Fertilization (Hitoshi Sawada) --- 21 Self-incompatibility in the Brassicaceae (Megumi Iwano) --- 22 Signalling Events in Pollen Acceptance or Rejection in the Arabidopsis Species (Daphne R. Goring) --- 23 Papaver rhoeas S-Determinants and the Signaling Networks they Trigger (Vernonica E. Franklin-Tong ) --- 24 S-RNase-based Self-incompatibility in Petunia: A Complex Non-self Recognition System Between Pollen and Pistil (Teh-hui Kao) --- 25 Self-incompatibility System of Ipomoea trifida, a Wild-type Sweet Potato (Tohru Tsuchiya) --- Part 4 Male–Female Interaction and Gamete Fusion --- 26 Profiling the GCS1-based Gamete Fusion Mechanism (Toshiyuki Mori) --- 27 Fertilization Mechanisms of the Rodent Malarial Parasite Plasmodium berghei (Makoto Hirai) --- 28 Sexual Reproduction of a Unicellular Charophycean Alga, Closterium peracerosum-strogosum-littorale Complex (Hiroyuki Sekimoto) --- 29 Fertilization of Brown Algae: Flagellar Function in Phototaxis and Chemotaxis (Taizo Motomura ) --- 30 Gene and Protein Expression Profiles in Rice Gametes and Zygotes: A Cue for Understanding the Mechanisms of Gametic and Early Zygotic Development in Angiosperms (Takashi Okamoto) --- 31 Role of CD9 in Sperm-Egg Fusion and Virus-induced Cell Fusion in Mammals (Kenji Miyado) --- 32 The Mechanism of Sperm-Egg Fusion in Mouse and the Involvement of IZUMO1 (Naokazu Inoue) --- 33 A ZP2 Cleavage Model of Gamete Recognition and the Post-fertilization Block to Polyspermy (Jurrien Dean) --- 34 Involvement of Carbohydrate Residues of the Zona Pellucida in In Vitro Sperm Recognition in Pigs and Cattle (Naoto Yonezawa) --- Part 5 Organella, Proteolysis, and New Techniques --- 35 The Role of Peroxisomes in Plant Reproductive Processes (Shoji Mano) --- 36 Regulation of Vacuole-mediated Programmed Cell Death During Innate Immunity and Reproductive Development in Plants (Tomoko Koyano) --- 37 Sperm Proteasomes as a Putative Egg Coat Lysin in Mammals (Peter Sutovsky) --- 38 Germline Transformation in the Ascidian Ciona intestinalis (Yasunori Sasakura) --- BM Index.  
    Pages: Online-Ressource (XII, 480 pages) , 127 illustrations, 102 illustrations in color
    ISBN: 9784431545897
    Language: English
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  • 8
    Keywords: Life sciences ; Biodiversity ; Nature conservation ; Life Sciences ; Biodiversity ; Nature Conservation ; Plant Systematics/Taxonomy/Biogeography ; Animal Systematics/Taxonomy/Biogeography
    Description / Table of Contents: Phylogenetics and conservation biology: drawing a path into the diversity of life --- The value of phylogenetic diversity --- The PD phylogenetic diversity framework: linking evolutionary history to feature diversity for biodiversity conservation --- Reconsidering the loss of evolutionary history: how does non-random extinction prune the tree-of-life?- Phylogenetics and conservation in New Zealand: the long and the short of it --- What is the meaning of extreme phylogenetic diversity? The case of phylogenetic relict species --- Using phylogenetic dissimilarities among sites for biodiversity assessments and conservation --- Phylogenetic diversity measures and their decomposition: a framework based on hill numbers --- Split diversity: measuring and optimizing biodiversity using phylogenetic split networks --- The rarefaction of phylogenetic diversity: formulation, extension and application --- Support in area prioritization using phylogenetic information --- Assessing hotspots of evolutionary history with data from multiple phylogenies: an analysis of endemic clades from New Caledonia --- Representing hotspots of evolutionary history in systematic conservation planning for European mammals --- Priorities for conservation of the evolutionary history of amphibians in the cerrado --- Global spatial analyses of phylogenetic conservation priorities for aquatic mammals --- Metapopulation capacity meets evolutionary distinctness: spatial fragmentation complements phylogenetic rarity in prioritization. - Patterns of species, phylogenetic and mimicry diversity of clearwing butterflies in the Neotropics --- Conservation of phylogenetic diversity in Madagascar’s largest endemic plant family, Sarcolaenaceae --- The future of phylogenetic systematics in conservation biology: linking biodiversity and society
    Pages: Online-Ressource (XVII, 390 pages) , 79 illustrations
    ISBN: 9783319224619
    Language: English
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  • 9
    Keywords: Medicine ; Neurosciences ; Otorhinolaryngology ; Biomedicine ; Neurosciences ; Otorhinolaryngology
    Description / Table of Contents: The International Symposium on Hearing is a prestigious,triennial gathering where world-class scientists present and discuss the most recent advances in the field of human and animal hearing research. The 2015 edition will particularly focus on integrative approaches linking physiological, psychophysical and cognitive aspects of normal and impaired hearing. Like previous editions, the proceedings will contain about 50 chapters ranging from basic to applied research, and of interest to neuroscientists, psychologists, audiologists, engineers, otolaryngologists, and artificial intelligent researchers
    Pages: Online-Ressource (XXIX, 484 pages) , 138 illustrations, 92 illustrations in color
    ISBN: 9783319254746
    Language: English
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  • 10
    Keywords: Medicine ; Neurosciences ; Neurology ; Psychiatry ; Biomedicine ; Neurosciences ; Neurology ; Psychiatry
    Description / Table of Contents: Hippocampal mechanisms for the segmentation of space by goals and boundaries --- Cortical Evolution: Introduction to the Reptilian Cortex --- Flow of information underlying a tactile decision in mice --- The Visual Brain: Computing through Multiscale Complexity --- Grid cells and spatial maps in entorhinal cortex and hippocampus --- The striatum and decision-making based on value --- Decoding the dynamics of conscious perception: The temporal generalization method --- Sleep and synaptic down-selection --- Federating and integrating what we know about the brain at all scales - a challenge for the future. Computer science meets the clinical neurosciences
    Pages: Online-Ressource (XIII, 172 pages) , 33 illustrations, 30 illustrations in color
    ISBN: 9783319288024
    Language: English
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