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  • 04. Solid Earth::04.08. Volcanology::04.08.99. General or miscellaneous
  • Genetic variation
  • Iranian Fisheries Science Research Institute  (9)
  • Nature Publishing Group  (4)
  • MISCELLANEA INGV  (3)
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Years
  • 1
    Publication Date: 2020-12-21
    Description: Explosive events, lava-fountains and effusions frequently characterize eruptive activity at Etna. Consequently, the town of Catania and many local municipalities are potentially exposed to ash fallout and lava flows. Besides volcanic hazard, earthquakes and landslides affect this volcanic region as well. The Task 5.1 of the European project "MED-SUV'' (Grant Agreement n°. 308665) deals with the observation of these threatening phenomena from space and ground and their characterization and understanding. The Task encompasses six subtasks, which focus on and analyze the aforementioned hazards in terms of their characteristics, duration and spatial dimension: • Test cases for significant eruptive events have been defined by the subtask 5.1.1. The time span from 2005 to 2011 was chosen for its wealth of eruptive episodes and their well-documented evolution; • The mapping of eruptive products from satellite data will allow us the improvement of the interpretation and modeling of the mechanisms of cone-forming and lava flow emplacement. This topic is developed in the subtask 5.1.2; • Multidisciplinary experiments are planned in the subtask 5.1.3, and will be carried out at the North­ East Crater in July 2014; • Another important deliverable is given by tools of data mining proposed by the subtask 5.1.4. These tools will be available for the analysis of parameters of whatever nature (e.g., geochemical, geophysical), providing they are processed in numerical format; • The subtask 5.1.5 provides a characterization of the volcanic plume and eruptive products, with an integrated analysis of atmospheric, satellite and ground-based measurements, which play an important role in ash-cloud dispersal models; • The sub 5.1.6 focuses on landslide susceptibility analysis and zoning. The goal will be to highlight the regional distribution of potentially unstable slopes based on a detailed study of the factors responsible for landslides.
    Description: Published
    Description: Nicolosi (Catania), Italy
    Description: 2V. Dinamiche di unrest e scenari pre-eruttivi
    Description: open
    Keywords: Etna ; volcanic activity ; threatening phenomena ; 04. Solid Earth::04.08. Volcanology::04.08.99. General or miscellaneous
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: Oral presentation
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  • 2
    Publication Date: 2017-04-04
    Description: In this paper, we describe the 1809 eruption of Mt. Etna, Italy, which represents one historical rare case in which it is possible to observe details of the internal structure of the feeder system. This is possible thanks to the presence of two large pit craters located in the middle of the eruptive fracture field that allow studying a section of the shallow feeder system. Along the walls of one of these craters, we analysed well-exposed cross sections of the uppermost 15–20 m of the feeder system and related volcanic products. Here, we describe the structure, morphology and lithology of this portion of the 1809 feeder system, including the host rock which conditioned the propagation of the dyke, and compare the results with other recent eruptions. Finally, we propose the dynamic model of the magma behaviour inside a laterally-propagating feeder dyke, demonstrating how this dynamic triggered important changes in the eruptive style (from effusive/Strombolian to phreatomagmatic) during the same eruption. Our results are also useful for hazard assessment related to the development of flank eruptions, potentially the most hazardous type of eruption from basaltic volcanoes in densely urbanized areas, such as Mt. Etna.
    Description: Published
    Description: 1-11
    Description: 2T. Tettonica attiva
    Description: 2V. Dinamiche di unrest e scenari pre-eruttivi
    Description: 3V. Dinamiche e scenari eruttivi
    Description: 4V. Vulcani e ambiente
    Description: 6A. Monitoraggio ambientale, sicurezza e territorio
    Description: N/A or not JCR
    Description: open
    Keywords: feeder dyke ; basaltic volcanoes ; flank eruptions ; Etna ; volcanic hazards ; sill ; volcanic rift ; 04. Solid Earth::04.04. Geology::04.04.09. Structural geology ; 04. Solid Earth::04.07. Tectonophysics::04.07.07. Tectonics ; 04. Solid Earth::04.08. Volcanology::04.08.99. General or miscellaneous ; 04. Solid Earth::04.08. Volcanology::04.08.03. Magmas ; 04. Solid Earth::04.08. Volcanology::04.08.04. Thermodynamics ; 04. Solid Earth::04.08. Volcanology::04.08.05. Volcanic rocks ; 04. Solid Earth::04.08. Volcanology::04.08.08. Volcanic risk ; 05. General::05.02. Data dissemination::05.02.03. Volcanic eruptions
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: article
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  • 3
    Publication Date: 2017-04-04
    Description: Improving lava flow hazard assessment is one of the most important and challenging fields of volcanology, and has an immediate and practical impact on society. Here, we present a methodology for the quantitative assessment of lava flow hazards based on a combination of field data, numerical simulations and probability analyses. With the extensive data available on historic eruptions of Mt. Etna, going back over 2000 years, it has been possible to construct two hazard maps, one for flank and the other for summit eruptions, allowing a quantitative analysis of the most likely future courses of lava flows. The effective use of hazard maps of Etna may help in minimizing the damage from volcanic eruptions through correct land use in densely urbanized area with a population of almost one million people. Although this study was conducted on Mt. Etna, the approach used is designed to be applicable to other volcanic areas.
    Description: This work was developed within the framework of TecnoLab, the Laboratory for Technological Advance in Volcano Geophysics organized by INGV-CT, DIEES-UNICT, and DMI-UNICT.
    Description: Published
    Description: 3493
    Description: 1V. Storia e struttura dei sistemi vulcanici
    Description: 2V. Dinamiche di unrest e scenari pre-eruttivi
    Description: 3V. Dinamiche e scenari eruttivi
    Description: 4V. Vulcani e ambiente
    Description: 6A. Monitoraggio ambientale, sicurezza e territorio
    Description: 3IT. Calcolo scientifico e sistemi informatici
    Description: JCR Journal
    Description: restricted
    Keywords: Lava flow hazard ; Etna ; 04. Solid Earth::04.04. Geology::04.04.99. General or miscellaneous ; 04. Solid Earth::04.08. Volcanology::04.08.99. General or miscellaneous ; 05. General::05.01. Computational geophysics::05.01.99. General or miscellaneous ; 05. General::05.02. Data dissemination::05.02.99. General or miscellaneous ; 05. General::05.08. Risk::05.08.99. General or miscellaneous
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: article
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  • 4
    Publication Date: 2017-04-04
    Description: In the framework of MED-SUV, WP5 is in charge of studying Mt. Etna's volcanic activity. We defmed periods and phenomena of the volcano activity to be used by the WP5 partners as Test Cases in the time window 2005-2011 i.e. that of the data available in the MED-SUV database. Overall, characterisation of eruptive activity and/or periods of quiescence will improve our knowledge on the geophysical and geochemical processes taking place inside Mt. Etna's volcanic system. These processes to be characterized include: • magma formation and evolution, • conditions of storage and transfer of magma in reservoirs at different levels within the crust; • physical and chemical interaction of magma with surrounding rocks and fracture/fault systems and their effects at the surface; • opening of eruptive vents/fissures as well as eruptive processes (including the formation and evolution of lava fields, volcanic plumes, pyroclastic fallout, etc.). The joint effort around the Test Cases will help the WP5 team addressing key questions such as: • what has determined changes of Mt. Etna eruptive style (mainly effusive vs. short-lasting, frequent paroxysmal events) in the last decades? • how is the shallow plumbing system (-1-4 km from the summit) structured? What are the processes occurring in this portion of the volcano feeding system and the key parameters controlling these processes? How does magma behave at shallow depths? • what is the suitability of cross-correlated parameters/models for shedding light on the relationship between shallow (〈5-6 km) earthquakes of the eastern flank ofMt. Etna and volcanic activity (if any)? For such questions, analysing carefully the periods of "quiescence" that precede eruptions is not less important than analyzing the eruptions themselves.
    Description: Published
    Description: Nicolosi (Catania), Italy
    Description: 1V. Storia e struttura dei sistemi vulcanici
    Description: open
    Keywords: Etna ; volcanic activity ; test cases ; 04. Solid Earth::04.08. Volcanology::04.08.99. General or miscellaneous
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: Poster session
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  • 5
    Publication Date: 2017-04-04
    Description: In open conduit volcanoes, volatile-rich magma continuously enters into the feeding system nevertheless the eruptive activity occurs intermittently. From a practical perspective, the continuous steady input of magma in the feeding system is not able to produce eruptive events alone, but rather surplus of magma inputs are required to trigger the eruptive activity. The greater the amount of surplus of magma within the feeding system, the higher is the eruptive probability.Despite this observation, eruptive potential evaluations are commonly based on the regular magma supply, and in eruptive probability evaluations, generally any magma input has the same weight. Conversely, herein we present a novel approach based on the quantification of surplus of magma progressively intruded in the feeding system. To quantify the surplus of magma, we suggest to process temporal series of measurable parameters linked to the magma supply. We successfully performed a practical application on Mt Etna using the soil CO2 flux recorded over ten years.
    Description: Published
    Description: 30471
    Description: 2V. Dinamiche di unrest e scenari pre-eruttivi
    Description: 5V. Sorveglianza vulcanica ed emergenze
    Description: JCR Journal
    Description: restricted
    Keywords: eruptive potential ; eruptive probability ; open conduit volcanoes ; Etna ; Soil CO2 flux ; 04. Solid Earth::04.08. Volcanology::04.08.99. General or miscellaneous ; 04. Solid Earth::04.08. Volcanology::04.08.01. Gases ; 04. Solid Earth::04.08. Volcanology::04.08.06. Volcano monitoring ; 05. General::05.08. Risk::05.08.01. Environmental risk
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: article
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  • 6
    Publication Date: 2019-04-03
    Description: A multidisciplinary approach based on image analysis of seismic signals, thermodynamics and mass balance has been here adopted to find quantitative relations between magma degassing at depth and the transition from Strombolian activity to lava fountaining for a set of paroxysmal eruptions occurred at Mt. Etna volcano in March-April 2013. The image processing of the seismogram allows handling of a huge quantity of data, providing a tool for the simple extraction of numerical values. We propose a model based on the consideration that gas outbursts are a vehicle of the transfer of energy tracked by seismic signals during the uprising of magma. Thus, the simple assumption of a relation of proportionality between the energy of the seismic signal and the mass of exsolved gas allows us to interpret transitions of the eruptive style as due to the amount of undegassed magma recharging the feeding system. Changes of this recharge rate in the range of 1:20 control the evolution of the eruptive process, and are evidence for the limited area section of the feeding conduit. Being this transition process observed in volcanic regions worldwide, the model can be successfully applied to other basaltic volcanoes. Furthermore, the image analysis technique may be applied to other contexts in which the interpretation of seismograms is necessary.
    Description: Published
    Description: Nicolosi (Catania), Italy
    Description: 2V. Dinamiche di unrest e scenari pre-eruttivi
    Description: open
    Keywords: Etna ; magma degassing ; modelling ; image processing ; 04. Solid Earth::04.08. Volcanology::04.08.99. General or miscellaneous
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
    Type: Oral presentation
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  • 7
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    Iranian Fisheries Science Research Institute | Tehran, Iran
    Publication Date: 2021-05-19
    Description: The aim of this study was stablish of gene bank on The Caspian Sea bony fish, identification genetic characterization and population of Barbus brachycephalus caspius, Lucioperca lucioperca , Rutilus rutilus caspius , Rutilus frisi kutum and Salmo trutta caspius in southern part of the Caspian Sea by molecular method (Microsatellites) and formation DNA bank, create of cryopreservation bank of bony fish and the feasibility of creating a natural habitat for spawning of bony fish in the Caspian Sea in order to preserve biodiversity and genetic risk. The results showed that The genetic diversity was significantly different between samples of Golestan (Goegan Gulf), Gilan (Sefidrood, Karganrood and Astara rivers) and Mazandaran (Tajan, Tonekabon, Sardabrood and Chaloos rivers) (p〈0.05) and there were different genetic groups. In addition, DNA bank of these species was carried out. After sperm sampling of Rutilus frisi kutum and Salmo trutta caspius, their quality were tested and some parameters such as motility, duration of mobility, density, pH and osmolality were measured. The results showed that, percentage of motile sperm, timing motility and sperm density of Caspian trout were higher than those of Caspian kutum but osmolality and pH of Caspian trout were lower than those of Caspian kutum. Over time, the percentage of sperm motility and mobility for both species declined compared with fresh samples. After thawing, percentage of motile sperm and timing motility of Caspian kutum were lower than those factors Caspian trout. The results showed that the sample of Caspian kutum sperm that were diluted by ethylene glycol after thawing and were immotile all of them. However, the samples were diluted by glycerol, after thawing, were alive and motile. According to the results, it seems very important species differences that must be fully considered in the process of freezing sperm. The use of a single protocol would not be successful in cryopreservation because the reaction of sperm against to chemical agents is variable. Sampling of physical and chemical parameters of water, macrobenthic invertebrates and fish fauna was conducted seasonally in each rivers (Tajan, Haraz, Sardabrood and Chaloos rivers) at selected stations during one year. A total of 53 taxa of macrobentic invertabrates were identified in the four mentioned rivers. 15 species of fish were determined in the studied rivers that 6 of them were non-native species. All identified fish species were native and the anadermous fish was not catch. The results showed that, the relative abundance of fish species resistant to pollution and hard environmental conditions were much more that sensitive species. Physicochemical parameters of water, turbidity, nutrients, biodiversity, nutrition functioning group and present or absent of fish species showed that there are significant decrease in water qualities from upstream ratio to downstream and there is not any possibility to natural reproduction of migrated species that are dominant and in danger at downstream. In Shahid- Rajaei dam the maximum relative abundance of fish species belonged to Capoeta capoeta, Luciobarbus capito and Squalius cephalus, respectively. The resurvey of this dam and its upstream have been preparing such a favorable condition that seems there are potential of introduction and inhabitant of some of the in danger fish species as a genetic reserve for biodiversity preservation.
    Description: Iranian Fisheries Science Research Institute
    Description: Published
    Keywords: Genetic variation ; Gene bank ; Freezing sperm ; Natural reproduction ; Squalius cephalus ; Luciobarbus capito ; Capoeta capoeta ; Barbus brachycephalus caspius ; Lucioperca lucioperca ; Rutilus rutilus caspius ; Rutilus frisi kutum ; Salmo trutta caspius
    Repository Name: AquaDocs
    Type: Report , Refereed
    Format: 100pp.
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  • 8
    Publication Date: 2022-05-25
    Description: © The Author(s), 2013. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Nature 499 (2013): 209–213, doi:10.1038/nature12221.
    Description: Coccolithophores have influenced the global climate for over 200 million years1. These marine phytoplankton can account for 20 per cent of total carbon fixation in some systems2. They form blooms that can occupy hundreds of thousands of square kilometres and are distinguished by their elegantly sculpted calcium carbonate exoskeletons (coccoliths), rendering them visible from space3. Although coccolithophores export carbon in the form of organic matter and calcite to the sea floor, they also release CO2 in the calcification process. Hence, they have a complex influence on the carbon cycle, driving either CO2 production or uptake, sequestration and export to the deep ocean4. Here we report the first haptophyte reference genome, from the coccolithophore Emiliania huxleyi strain CCMP1516, and sequences from 13 additional isolates. Our analyses reveal a pan genome (core genes plus genes distributed variably between strains) probably supported by an atypical complement of repetitive sequence in the genome. Comparisons across strains demonstrate that E. huxleyi, which has long been considered a single species, harbours extensive genome variability reflected in different metabolic repertoires. Genome variability within this species complex seems to underpin its capacity both to thrive in habitats ranging from the equator to the subarctic and to form large-scale episodic blooms under a wide variety of environmental conditions.
    Description: Joint Genome Institute (JGI) contributions were supported by the Office of Science of the US Department of Energy (DOE) under contract no. 7DE-AC02-05CH11231.
    Keywords: Genetic variation
    Repository Name: Woods Hole Open Access Server
    Type: Article
    Format: application/pdf
    Format: application/vnd.ms-excel
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  • 9
    Publication Date: 2021-07-16
    Description: In this study population genetic structure of Mnemiopsis leidyi were examined by 200 samples from the Caspian Sea. Samples were collected from Guilan province (Astara region), Mazandaran province (Amir Abad region), Golestan province (Gomishan region) and north part of the Caspian Sea. 50 samples were collected from each region. DNA was extracted by phenol - chlorophorm method and its concentration was 50 to 100 nanogram. PCR was performed using 18s rRNA gene. The PCR products of samples were digested by 12 restriction endonuclease enzymes. The digested products accompanied with standard marker (50 bp lader ). In order to measure fragment size samples were run on a 6% vertical polyacrylamide gel. The fragments were visualized by silver staining of the polyacrylamide gel. In this study, Dra I and Alu I enzymes showed different digestion pattern, as each of these enzymes had two genotypes. Other enzymes had similar digestion pattern. RAPD method used by 19 random primers. Ten of nineteen primers showed polymorphism patterns. Statistical analysis of data was performed by Popgene software. In this study, the maximum of genetic variation was in north of the Caspian Sea. Also, the maximum of genetic distance was between north area and Golestan coasts (0.089) and the minimum of genetic distance was between Mazandaran and Guilan coasts (0.001). The UOGMA dendogram showed two clusters. The samples of Mazandaran , Guilan and Golestan coasts placed in one cluster and samples of north area in other cluster The genetic diversity was significantly different between samples of north area and Golestan coasts (p≤0.05). As result, there is a significant genetic divergence between some of samples. Therefore, two genetic group of Mnemiopsis leidyi were identified in the Caspian Sea.
    Keywords: Biology ; Iran ; Caspian Sea ; Guilan province ; Mazandaran province ; Golestan province ; RFLP ; RAPD ; Mnemiopsis leidyi ; Genetic variation ; Population ; Molecular Test ; Samples ; Enzymes ; Genotype
    Repository Name: AquaDocs
    Type: monograph
    Format: application/pdf
    Format: application/pdf
    Format: 47
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  • 10
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    Iranian Fisheries Science Research Institute | Tehran, Iran
    In:  http://aquaticcommons.org/id/eprint/25375 | 18721 | 2018-09-14 07:39:13 | 25375 | Iranian Fisheries Science Research Institute
    Publication Date: 2021-07-16
    Description: Two of the three objectives of project was carried out success that one of them is following: The genetic diversity of Liza salien(Risso,1810) in the south part of Caspian sea using the Mitochondrial DNA sequencing (mtDNA) was carried out as first objective of project that based on the mitochondrial DNA sequencing (mtDNA) of 16S rRNA was used in order to clarify genetic structure and genetic diversity of lizasaliens in three western (Anzali), middle (sari), and eastern (Gomishan lagoon) of south part of Caspian sea. As a result we obtained 552base pairs of 16SrRNA sequence. A total of 6 different haplotypes and 29 variable sites were identified .The average nucleotide diversity(π) and haplotype diversity(h) in samples of all regions were 0.29 , and 0.004 respectively. The results obtained from genetic distance showed low rate in that of 3 regions. Estimates of gene flow indicated there is no reproductive isolation between three regions and also there was not significant genetic differentiation between differentregions (p〉0.05). the findings from the present study suggest that there is equal population of Liza saliens in the studied regions: Genetic differences and phylogenic relationships among six Mugilidae species (Mugilcephalus, M. capito, Liza subviridis, L. saliens, L. aurata, Valamugilbuchanani) were determined using PCR-sequencing as second objective of project. M. cephalus, L. subviridis and V. buchanani from the Persian Gulf and Oman Sea, and L. aurata and L. saliens from the Caspian Sea were collected. Samples of an imported, Egyptian species M. capito (this species was mixed with the main imported species as M. cephalusfingerling) were obtained from the Gomishan Research Center in Gorgan. Total DNA from the samples were extracted according to phenol-chloroform method Mithochondrial DNA ,16s RNA was amplified using thermo cyclermachine with universal primers and thensequenced by sending to Takapoozist Company and thereafter to France. Analysis of the sequences showed great differences between Mugil species and the other studied species. The phylogenetic tree obtained through Neighbor-Joining method revealed that L. saliensand L. aurata were in the same branch while L. subviridis was in a separate branch. In contrast, Maximum Parsimony tree located L. subviridis and L. aurata in a single branch and assigned L. saliens to a distinct branch. This result brings in the question of monophyletic origin of the genus Liza.Also.
    Keywords: Aquaculture ; Iran ; Persian Gulf ; Oman Sea ; Caspian Sea ; Anzali ; Sari ; Gomishan Lagoon ; Mugillidae ; Phylogeny ; Population ; mtDNA ; PCR ; Genetic variation ; Grey mullet ; Mugilcephalus ; Diversity ; M. capito ; Liza subviridis ; L. saliens ; L. aurata
    Repository Name: AquaDocs
    Type: monograph
    Format: application/pdf
    Format: application/pdf
    Format: 118
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