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  • Actin
  • thema EDItEUR::U Computing and Information Technology::UY Computer science::UYM Computer modelling and simulation
  • InTechOpen  (8)
  • Logos Verlag Berlin  (3)
  • Nature Publishing Group  (1)
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  • 1
    Publication Date: 2024-04-04
    Description: Humans have been exposed to a plethora of pathogens (bacteria, viruses) ever since. Infectious diseases are among the leading causes of death worldwide. For example, in 2011, 1.34 million people died of tuberculosis, which is caused by an infection with Mycobacterium tuberculosis. Even more died of an infection by the human immunodeficiency virus (HIV; 1.78 million) or lower respiratory tract infection (3.46 million) [1]. In addition, recurring pandemic outbreaks of the influenza A virus, as in 2009, or an epidemic outbreak of enterohemorrhagic E. coli (EHEC) in Germany in 2011, show quite plainly that pathogens in the 21th century still are a severe health problem, not only in developing countries.
    Keywords: toxin ; pathogen ; toxin ; pathogen ; Actin ; Bacteria ; Cell membrane ; Endocytosis ; Glycosphingolipid ; Influenza A virus ; Shiga toxin ; thema EDItEUR::P Mathematics and Science::PD Science: general issues
    Language: English
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  • 2
    Publication Date: 2024-04-14
    Description: Computer modelling & simulation
    Keywords: Computing & information technology ; thema EDItEUR::U Computing and Information Technology::UY Computer science::UYM Computer modelling and simulation
    Language: English
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  • 3
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    Logos Verlag Berlin | Logos Verlag Berlin
    Publication Date: 2024-04-04
    Description: Mit der Getriebefan-Technologie werden hohe Nebenstromverhältnisse und damit effizientere und leisere Flugantriebe möglich. Bei dieser Triebwerksarchitektur ist die Optimierung des Ölsystems im integralen Höchstleistungsgetriebe unerlässlich, insbesondere hinsichtlich dessen Kühlfunktion. Vorangegangene Untersuchungen haben gezeigt, dass der Ölausbreitung über die Zahnflanken infolge der Ölstrahl-Zahnrad-Interaktion (ÖZI) eine wichtige Rolle für die mittels Einspritzschmierung erzielte Kühlwirkung zukommt. Dennoch ist die Charakterisierung der ÖZI bislang lückenhaft. In dieser Arbeit wird die ÖZI mittels numerischer Strömungssimulation (CFD) zugänglich gemacht. Der dreidimensionale und transiente Strömungsprozess wird hochaufgelöst abgebildet, wodurch dessen quantitative Analyse möglich wird. Zum Einsatz kommen die gitterbasierte Volume-of-Fluid(VOF)-Methode und erstmals die partikelbasierte Smoothed-Particle-Hydrodynamics(SPH)-Methode. Unter Variation von Betriebsparametern wird die Datenbasis zur Charakterisierung der ÖZI geschaffen. Außerdem wird der Zahnradeingriff erstmals simulativ berücksichtigt. Als Haupteinflussgrößen für die Zahnflankenbenetzung werden die Aufpralltiefe, das Effektivvolumen und die Aufprall-Reynolds-Zahl identifiziert. Auf dieser Basis gebildete Korrelationen für die Benetzungsfläche und die Eindringtiefe sind durch die vorliegende Arbeit erstmals verfügbar. Dies unterstützt die Optimierung des Ölsystems für Getriebefan-Triebwerke und motiviert den weiteren Einsatz von CFD in Praxis und Forschung auf diesem Gebiet.
    Keywords: Getriebefan-Flugtriebwerk ; Zahnradkühlung ; Öl-Einspritzschmierung ; Smoothed Particle Hydrodynamics (SPH) ; Numerische Strömungsmechanik (CFD) ; thema EDItEUR::P Mathematics and Science::PB Mathematics::PBK Calculus and mathematical analysis::PBKS Numerical analysis ; thema EDItEUR::P Mathematics and Science::PD Science: general issues::PDR Impact of science and technology on society ; thema EDItEUR::P Mathematics and Science::PH Physics::PHH Thermodynamics and heat ; thema EDItEUR::T Technology, Engineering, Agriculture, Industrial processes::TB Technology: general issues::TBC Engineering: general ; thema EDItEUR::T Technology, Engineering, Agriculture, Industrial processes::TG Mechanical engineering and materials::TGB Mechanical engineering::TGBF Tribology (friction and lubrication) ; thema EDItEUR::T Technology, Engineering, Agriculture, Industrial processes::TG Mechanical engineering and materials::TGB Mechanical engineering::TGBN Engines and power transmission ; thema EDItEUR::T Technology, Engineering, Agriculture, Industrial processes::TG Mechanical engineering and materials::TGM Materials science::TGMF Engineering: Mechanics of fluids ; thema EDItEUR::T Technology, Engineering, Agriculture, Industrial processes::TH Energy technology and engineering::THN Heat transfer processes ; thema EDItEUR::T Technology, Engineering, Agriculture, Industrial processes::TR Transport technology and trades::TRP Aerospace and aviation technology ; thema EDItEUR::U Computing and Information Technology::UB Information technology: general topics ; thema EDItEUR::U Computing and Information Technology::UY Computer science::UYM Computer modelling and simulation
    Language: German
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  • 4
    Publication Date: 2024-04-14
    Description: Computer modelling & simulation
    Keywords: Computing & information technology ; thema EDItEUR::U Computing and Information Technology::UY Computer science::UYM Computer modelling and simulation
    Language: English
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  • 5
    Publication Date: 2024-04-04
    Description: Die präzise Vorhersage der Emissionen in Flugtriebwerken ist aufgrund der Emissionsvorschriften von großer Bedeutung. Im Auslegungsprozess werden Strömungssimulationen verwendet, in denen wichtige Phänomene, wie Turbulenz, Zerstäubung, Verdunstung und Verbrennung mit Modellen abgebildet werden. Die dabei notwendigen Tropfenstartbedingungen haben großen Einfluss auf die Schadstoffbildung. Mit der vorliegenden Arbeit wurde erstmals ein statistisches Modell entwickelt, das die Eigenschaften eines Sprays mit multivariaten Wahrscheinlichkeitsdichtefunktionen beschreibt. Es basiert auf einer 5D-Copula-Konstruktion, die in Zusammenarbeit mit Prof. Grothe und Prof. Coblenz entwickelt wurde. Damit ist es möglich, mittels SPH-Simulationen generierte Spraydaten effizient als Tropfenstartbedingungen in Euler-Lagrange-Simulationen der Triebwerksbrennkammer zu übertragen. Da die Spraydaten sich für die verschiedenen Betriebsbedingungen unterscheiden, wurden die Parameter der Copula-Konstruktion mittels Metamodellen den Betriebsbedingungen zugeordnet. Dadurch ist das Modell in der Lage, für beliebige Betriebspunkte im Gültigkeitsbereich Tropfenstartbedingungen zu generieren. Neben diesem sogenannten MARTINI-Modell (MultivARiaTe-INjectIon) wurde ein phänomenologisch-statistisches Modell entwickelt, das aufgrund seiner analytischen Gleichungen Einblicke in den Zerstäubungsprozess ermöglicht, die das rein statistisch aufgebaute MARTINI-Modell nicht erlaubt.
    Keywords: Triebwerksbrennkammer ; Luftgestützte Zerstäubung ; Copulas ; Smoothed-Particle-Hydrodynamics (SPH) ; Euler-Lagrange-Ansatz ; thema EDItEUR::P Mathematics and Science::PB Mathematics::PBT Probability and statistics ; thema EDItEUR::T Technology, Engineering, Agriculture, Industrial processes::TH Energy technology and engineering ; thema EDItEUR::U Computing and Information Technology::UY Computer science::UYM Computer modelling and simulation
    Language: German
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  • 6
    Publication Date: 2024-04-14
    Description: Computer modelling & simulation
    Keywords: Computing & information technology ; thema EDItEUR::U Computing and Information Technology::UY Computer science::UYM Computer modelling and simulation
    Language: English
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  • 7
    Publication Date: 2024-04-14
    Description: Computer modelling & simulation
    Keywords: Computing & information technology ; thema EDItEUR::U Computing and Information Technology::UY Computer science::UYM Computer modelling and simulation
    Language: English
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  • 8
    Publication Date: 2024-04-14
    Description: Computational fluid dynamics (CFD) is the main field of computational mechanics that has historically benefited from advances in high-performance computing. High-performance computing involves several techniques to make a simulation efficient and fast, such as distributed memory parallelism, shared memory parallelism, vectorization, memory access optimizations, etc. As an introduction, we present the anatomy of supercomputers, with special emphasis on HPC aspects relevant to CFD. Then, we develop some of the HPC concepts and numerical techniques applied to the complete CFD simulation framework: from preprocess (meshing) to postprocess (visualization) through the simulation itself (assembly and iterative solvers).
    Keywords: parallelization, high-performance computing, assembly, supercomputing, meshing, adaptivity, algebraic solvers, parallel I/O, visualization ; thema EDItEUR::U Computing and Information Technology::UY Computer science::UYM Computer modelling and simulation
    Language: English
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  • 9
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    Logos Verlag Berlin | Logos Verlag Berlin
    Publication Date: 2024-03-24
    Description: Auralisation describes the process of generating and presenting audible sound using computer programs and audio hardware. Since the result is perceived naturally by the human's auditory system, a demonstration by means of auralisation is easily comprehensible and neither requires background knowledge nor expertise. Producing auralisation under real-time constraints increases the implementation demands significantly. Real-time auralisation is required in applications that respond to user interaction, for example, in interactive Virtual Reality (VR) environments. The realisation of a real-time auralisation application for outdoor environments represents a promising addition to current noise assessment procedures. It also delivers the foundation for the auditory modality in outdoor VR scenarios, which can serve as as an audio-video tool for perception-related scientific investigations. Traditional approaches often neglect the time-variant characteristic of dynamically moving sound sources and receivers, treating an acoustic environment as temporarily static on a frame-by-frame basis. Adaption to dynamic events is implemented by transition of sequences of time-invariant simulations, which is contradictory to the highly dynamic nature of outdoor scenarios. This book describes a system that attaches increased importance to fast geometric diffraction simulations and employs an audio rendering network that reflects the time-variant nature of dynamic outdoor sound propagation.
    Keywords: Auralisation ; Real-time ; Digital Signal Processing ; Sound Propagation Simulation ; Environmental Noise ; thema EDItEUR::A The Arts::AV Music::AVX Music recording and reproduction ; thema EDItEUR::P Mathematics and Science::PH Physics::PHU Mathematical physics ; thema EDItEUR::T Technology, Engineering, Agriculture, Industrial processes::TJ Electronics and communications engineering::TJK Communications engineering / telecommunications ; thema EDItEUR::U Computing and Information Technology::UY Computer science::UYS Digital signal processing (DSP) ; thema EDItEUR::T Technology, Engineering, Agriculture, Industrial processes::TT Other technologies and applied sciences::TTA Acoustic and sound engineering ; thema EDItEUR::U Computing and Information Technology::UM Computer programming / software engineering::UMB Algorithms and data structures ; thema EDItEUR::U Computing and Information Technology::UY Computer science::UYM Computer modelling and simulation ; thema EDItEUR::U Computing and Information Technology::UY Computer science::UYU Audio processing ; thema EDItEUR::U Computing and Information Technology::UY Computer science::UYV Virtual reality ; thema EDItEUR::U Computing and Information Technology::UY Computer science::UYZ Human–computer interaction
    Language: English
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  • 10
    Publication Date: 2024-04-14
    Description: Computer modelling & simulation
    Keywords: Computing & information technology ; thema EDItEUR::U Computing and Information Technology::UY Computer science::UYM Computer modelling and simulation
    Language: English
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  • 11
    Publication Date: 2024-04-14
    Description: Computer modelling & simulation
    Keywords: Computing & information technology ; thema EDItEUR::U Computing and Information Technology::UY Computer science::UYM Computer modelling and simulation
    Language: English
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  • 12
    Publication Date: 2022-05-26
    Description: © The Author(s), 2017. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Nature Communications 8 (2017): 2047, doi:10.1038/s41467-017-01848-y.
    Description: Integrin αβ heterodimer cell surface receptors mediate adhesive interactions that provide traction for cell migration. Here, we test whether the integrin, when engaged to an extracellular ligand and the cytoskeleton, adopts a specific orientation dictated by the direction of actin flow on the surface of migrating cells. We insert GFP into the rigid, ligand-binding head of the integrin, model with Rosetta the orientation of GFP and its transition dipole relative to the integrin head, and measure orientation with fluorescence polarization microscopy. Cytoskeleton and ligand-bound integrins orient in the same direction as retrograde actin flow with their cytoskeleton-binding β-subunits tilted by applied force. The measurements demonstrate that intracellular forces can orient cell surface integrins and support a molecular model of integrin activation by cytoskeletal force. Our results place atomic, Å-scale structures of cell surface receptors in the context of functional and cellular, μm-scale measurements.
    Description: Supported by the Lillie Research award from Marine Biological Laboratory and the University of Chicago (C.M.W., T.A.S., S.M., T.T.), NIH 5R13GM085967 grant to the Physiology Course at Marine Biological Laboratory, HHMI Summer Institute at Marine Biological Laboratory (S.M.), NIH CA31798 (T.A.S., P.N., T.I.M.), NIH GM100160 (T.T., S.M.), NIH GM092802 (D.B., N.K.), NIH GM114274 (R.O., S.M.) National Center for Biological Sciences-Tata Institute of Fundamental Research (S.M., J.M.K.), J.C. Bose Fellowship and HFSP Grant RGP0027/2012 (S.M.), NHLBI Division of Intramural Research (C.M.W., V.S.), Swedish Research Council VR 524-2011-891 Fellowship (P.N.), Swedish Society for Medical Research SSMF Fellowship (P.N.), Crafoord Foundation (P.N.).
    Keywords: Actin ; Integrin signalling ; Integrins ; Molecular imaging ; Polarization microscopy
    Repository Name: Woods Hole Open Access Server
    Type: Article
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