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  • 1
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    NOAA/National Ocean Service/ Marine Sanctuaries Division | Silver Spring, MD
    In:  http://aquaticcommons.org/id/eprint/2324 | 403 | 2011-09-29 19:15:42 | 2324 | United States National Ocean Service
    Publication Date: 2021-07-13
    Description: We tagged a total of 14 yellowtail snapper (Ocyurus chrysurus Bloch 1790) and black grouper (Mycteroperca bonaci Poey 1860) inside the Conch Reef Research Only Area (a no-take marine reserve) in the northern Florida Keys National Marine Sanctuary in November 2001. Both species are heavily exploited in the region. Our objective was to characterize site fidelity and movement behavior along the reef tract to the north and south of the release point. Fishes were collected by baited hook and line from the surface, surgically-tagged with coded-acoustic transmitters, and returned to the reef by snorkelers. Tracking of fish movement behavior was conducted by five acoustic receivers deployed on the seafloor from Davis Reef in the south to Pickles Reef in the north. Fishes were tracked for up to eight months. Results indicated that themajority of signal detections for individual fish from both species were recorded at the two Conch Reef receivers. Limited movement from Conch Reef to Davis Reef was recorded, but no signal detections were recorded at the two sites to the north of Conch Reef. These results suggestthat both species show site fidelity to Conch Reef. Future studies will seek to characterize this site fidelity with increased temporal and spatial resolution at Conch Reef. (PDF contains 25 pages.)
    Keywords: Ecology ; Management ; Fisheries ; Yellowtail snapper ; Ocyurus chrysurus ; Black grouper ; Mycteroperca bonaci ; Acoustic telemetry ; Marine reserves ; Site fidelity ; Movement patterns ; Florida Keys National Marine Sanctuary
    Repository Name: AquaDocs
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  • 2
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    NOAA/National Ocean Service/Marine Sanctuaries Division | Silver Spring, MD
    In:  http://aquaticcommons.org/id/eprint/2344 | 403 | 2011-09-29 19:11:08 | 2344 | United States National Ocean Service
    Publication Date: 2021-07-13
    Description: One goal of Gray’s Reef National Marine Sanctuary (NMS) is to protect the unique community found within the Sanctuary’s boundaries. An understanding of the ecologicalinteractions, including trophic structure, among these organisms is necessary to realize this goal. Therefore, diet information for 184 fish species was summarized from 113 published studies. Among the fish included are 84 fish species currently known to reside in Gray’s Reef NMS. Thelocations of these studies ranged from the Atlantic Ocean off the coast of the northeast United States to northern Brazil, the Gulf of Mexico, and the Caribbean. All of the species described in this bibliography occur in the southeast United States and are, therefore, current or potential residents of Gray’s Reef National Marine Sanctuary. Each entry includes the objectives, briefmethods, and conclusions of the article. The bibliography is also indexed by species. (PDF contains 64 pages.)
    Keywords: Management ; Conservation ; Fisheries ; Environment ; Gray’s Reef National Marine Sanctuary ; Southeast United States ; Fish diet ; Gut contents ; Marine ; Estuarine
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  • 3
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    NOAA/National Marine Fisheries Service | Seattle, WA
    In:  http://aquaticcommons.org/id/eprint/2477 | 403 | 2011-09-29 19:06:51 | 2477 | United States National Marine Fisheries Service
    Publication Date: 2021-07-13
    Description: Ghost shrimp and mud shrimp in the decapod infraorder Thalassinidea are ecologically important members of manybenthic intertidal and shallow subtidal infaunal communities, largely due to the sediment filtration and mixing that result from their burrowing and feeding behavior. These activities considerably modify their immediate environment and have made these cryptic animals extremely interesting to scientists in terms of their behavior, ecology, and classification.Over 20 years ago, seven species of thalassinideans were known from the South Atlantic Bight (Cape Hatteras, NC to Cape Canaveral, FL). During this study, the examinationof extensive collections from the National Museum of Natural History (NMNH), the Southeastern Regional Taxonomic Center (SERTC), and regional institutions, resultedin the identification of 14 species of thalassinideanscurrently known to occur within this region. The family Axiidae is represented by three species: Axius armatus, Calaxius jenneri, and Paraxiopsis gracilimana; the Callianassidae by six: Biffarius biformis, B. cf. fragilis, Callichirus major, Cheramus marginatus, Gilvossius setimanus, and Necallianassa berylae; the Calocarididae by two: Calocaris templemani and Acanthaxius hirsutimanus; andthe families Laomediidae, Thomassiniidae, and Upogebiidae are each represented by one: Naushonia crangonoides, Crosniera wennerae, and Upogebia affinis, respectively. Anillustrated key is presented for species level identification and supplemental notes on the ecology, distribution, and taxonomy of the species are provided.(PDF file contains 38 pages.)
    Keywords: Ecology ; Management ; Fisheries
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  • 4
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    NOAA/National Marine Fisheries Service | Seattle, WA
    In:  http://aquaticcommons.org/id/eprint/2476 | 403 | 2014-02-21 01:10:02 | 2476 | United States National Marine Fisheries Service
    Publication Date: 2021-07-13
    Description: Pelagic juvenile rockfish (Sebastes spp.) collected in surveys designed to assess juvenile salmonids and other species in the Gulf of Alaska in 1998 and 2000–2003provide an opportunity to document the occurrence of the pelagic juveniles of several species of rockfish. Often, species identification of rockfish is difficult or impossible at this stage of development (~20 to 60 mm),and few species indigenous to Alaska waters have been described. Use of mitochondrial DNA markers for rockfish species allowed unequivocal identification of ten species (S. aleutianus, S. alutus, S. borealis, S. entomelas, S.flavidus, S. melanops, S. pinniger, S. proriger, S. reedi, and S. ruberrimus) in subsamples from the collections. Other specimens were genetically assignable to groups of two or three species. Sebastes borealis, S. crameri, and S. reedi were identified using morphological data. Combining genetic and morphological data allowed successful resolution of the other species as S. emphaeus, probably S. ciliatus (although S. polyspinis cannot be totally ruled out), and S. polyspinis. Many specimens were initially morphologically indistinguishable from S. alutus, and several morphological groups included fish geneticallyidentified as S. alutus. This paper details the characteristics of these pelagic juveniles to facilitate morphological identification of these species in future collections. (PDF file contains 32 pages.)
    Keywords: Ecology ; Management ; Fisheries
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  • 5
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    NOAA/National Marine Fisheries Service | Seattle, WA
    In:  http://aquaticcommons.org/id/eprint/2480 | 403 | 2011-09-29 18:56:12 | 2480 | United States National Marine Fisheries Service
    Publication Date: 2021-07-13
    Description: This publication of the NOAA Professional Paper NMFS Seriesis the product of a special symposium on “Emerging Technologies for Reef Fisheries Research and Management” held during the 56th annual Gulf and Caribbean Fisheries Institute meeting in Tortola, British Virgin Islands, November 2003. The purpose of this collection is to highlight the diversity of questions and issues in reeffisheries management that are benefiting from applications of technology. Topics cover a wide variety of questions and issues from the study of individual behavior, distribution and abundance of groups and populations, and associations between habitats and fish and shellfish species.(PDF files contains 124 pages.)
    Keywords: Ecology ; Management ; Fisheries
    Repository Name: AquaDocs
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  • 6
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    NOAA/National Marine Fisheries Service | Seattle, WA
    In:  http://aquaticcommons.org/id/eprint/2503 | 403 | 2011-09-29 18:58:46 | 2503 | United States National Marine Fisheries Service
    Publication Date: 2021-07-13
    Description: Identification problems are common for many sharks due to a general lack of meristic characteristics that are typicallyuseful for separating species. Other than number of vertebrae and number and shape of teeth, identifications are frequently based on external features that are often shared among species. Identification problems in the field are most prevalent when live specimens are captured and releasing them with a minimum of stress is a priority (e.g., shark tagging programs). Identifications mustbe accurate and conducted quickly but this can be challenging, especially if specimens are very active or too large to be landed without physical damage. This field guide was designed primarily for use during field studies and presents a simplified method for identifying the 21 species of western North Atlantic Ocean sharks belonging to the family Carcharhinidae (carcharhinids). To assist with identifications a dichotomous key to Carcharhinidae was developed, and for the more problematic Carcharhinus species (12 species), separation sheets based on importantdistinguishing features were constructed. Descriptive text and illustrations provided in the species accounts were developed from field observations, photographs, andpublished references. (PDF file contains 36 pages.)
    Keywords: Ecology ; Management ; Fisheries
    Repository Name: AquaDocs
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  • 7
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    NOAA/National Ocean Service/National Marine Sanctuary Program | Silver Spring, MD
    In:  http://aquaticcommons.org/id/eprint/2280 | 403 | 2011-09-29 19:19:43 | 2280 | United States National Ocean Service
    Publication Date: 2021-07-13
    Description: This document presents the results of the first two monitoring events to track the recovery of a repaired coral reef injured by the M/V Wellwood vessel grounding incident of August 4, 1984. This grounding occurred within the boundaries of what at the time was designated the Key Largo National Marine Sanctuary (NMS), now designated the KeyLargo NMS Existing Management Area within the Florida Keys National Marine Sanctuary (FKNMS). Pursuant to the National Marine Sanctuaries Act (NMSA) 16 U.S.C. 1431 et seq., and the Florida Keys National Marine Sanctuary and Protection Act (FKNMSPA) of 1990, NOAA is the federal trustee for the natural and cultural resources of the FKNMS. Under Section 312 of the NMSA, NOAA has the authority to recover monetary damages for injury, destruction, or loss of Sanctuary resources, and to use the recovered monies to restore injured or lost sanctuary resources within the FKNMS. Therestoration monitoring program tracks patterns of biological recovery, determines the success of restoration measures, and assesses the resiliency to environmental andanthropogenic disturbances of the site over time. To evaluate restoration success, reference habitats adjacent to the restoration site are concurrently monitored to compare the condition of restored reef areas with “natural” coral reef areas unimpacted by the vessel grounding or other injury.Restoration of the site was completed on July 22, 2002, and thus far two monitoring events have occurred; one in the Fall of 2004, and one in the Summer/Fall of 2006. Themonitoring has consisted of: assessment of the structural stability of restoration modules and comparison of the coral recruitment conditions of the modules and reference sites. Corals are divided into Gorgonians, Milleporans, and Scleractinians and (except where noted) recruits are defined as follows: Gorgonians—maximum size (height) 150 mm at first monitoring event, 270 mm at second; Milleporans—maximum size (height) 65 mm at first event, 125 mm at second; Scleractinians—maximum size (greatest diameter) 50mm at second event (only one species was size-classed at first event, at smaller size). Recruit densities at the restored and reference areas for each event are compared, as are size-class frequency distributions. For the Scleractinians, number and percentage of recruits by species, as well as several common biodiversity indices are provided. Finally, a qualitative comparison of recruit substrate settlement preference is indicated. Generally, results indicate that restored areas are converging on reference areas, based on almost all parameters examined, with one noted exception. Further monitoring is plannedand the trends are anticipated to continue; close attention will be paid to the indicated anomaly. (PDF contains 63 pages.)
    Keywords: Ecology ; Management ; Fisheries ; Florida Keys National Marine Sanctuary ; Coral ; Grounding ; Restoration ; Reef modules ; Monitoring ; Wellwood ; Molasses Reef ; Recruitment ; Anthozoa ; Hydrozoa ; Octocorallia ; Hexacorallia ; Gorgonacea ; Anthoathecata (Millepora) ; Scleractinia
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  • 8
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    NOAA/National Ocean Service/National Marine Sanctuary Program | Silver Spring, MD
    In:  http://aquaticcommons.org/id/eprint/2287 | 403 | 2011-09-29 19:19:13 | 2287 | United States National Ocean Service
    Publication Date: 2021-07-13
    Description: With elevating interest to establish conservation efforts for groundfish stocks and continued scrutiny over the value of marine protected areas along the west coast, theimportance of enhancing our knowledge of seabed characteristics through mapping activities is becoming increasingly more important, especially in a timely manner.Shortly after the inception of the Seabed Mapping Initiative instituted with the US Geological Survey (USGS), the National Marine Sanctuary Program (NMSP) assembleda panel of habitat mapping experts. They determined that the status of existing data sets and future data acquisition needs varied widely among the individual sanctuaries and that more detailed site assessments were needed to better prioritize mapping efforts and outline an overall joint strategy. To assist with that specific effort and provide pertinent information for the Olympic Coast National Marine Sanctuary’s (OCNMS) Management Plan Review, this report summarizes the mapping efforts that have taken place at the site to date; calculates a timeframe for completion of baseline mapping efforts when operating under current data acquisition limitations; describes an optimized survey strategy to dramatically reduce the required time to complete baseline surveying; and provides estimates for the needed vessel sea-days (DAS) to accomplish baseline survey completion within a 2, 5 and 10 year timeframe. (PDF contains 38 pages.)
    Keywords: Ecology ; Management ; Fisheries ; Environment ; Benthic ; Habitat mapping ; Side scan sonar ; Multibeam echosounder ; Multibeam side scan sonar ; Interferometric side scan and bathymetry ; Olympic Coast National Marine Sanctuary ; Essential fish habitat
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  • 9
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    NOAA/National Ocean Service/Marine Sanctuaries Division | Silver Spring, MD
    In:  http://aquaticcommons.org/id/eprint/2345 | 403 | 2011-09-29 19:11:10 | 2345 | United States National Ocean Service
    Publication Date: 2021-07-13
    Description: Although ambient (background) noise in the ocean is a topic that has been widely studied since pre-World War II, the effects of noise on marine organisms has only been afocus of concern for the last 25 years. The main point of concern has been the potential of noise to affect the health and behavior of marine mammals. The Stellwagen BankNational Marine Sanctuary (SBNMS) is a site where the degradation of habitat due to increasing noise levels is a concern because it is a feeding ground and summer haven fornumerous species of marine mammals. Ambient noise in the ocean is defined as “the part of the total noise background observed with an omnidirectional hydrophone.” It isan inherent characteristic of the medium having no specific point source. Ambient noise is comprised of a number of components that contribute to the “noise level” in varyingdegrees depending on where the noise is being measured. This report describes the current understanding of ambient noise and existing levels in the Stellwagen BankNational Marine Sanctuary. (PDF contains 32 pages.)
    Keywords: Ecology ; Management ; Fisheries ; Environment
    Repository Name: AquaDocs
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  • 10
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    NOAA/National Ocean Service/Marine Sanctuaries Division | Silver Spring, MD
    In:  http://aquaticcommons.org/id/eprint/2347 | 403 | 2011-09-29 19:11:14 | 2347 | United States National Ocean Service
    Publication Date: 2021-07-13
    Description: Almost 120 days at sea aboard three NOAA research vessels and one fishing vessel over the past three years have supported biogeographic characterization of Tortugas Ecological Reserve (TER). This work initiated measurement of post-implementation effects of TER as a refuge for exploited species. In Tortugas South, seafloor transect surveys were conducted using divers, towed operated vehicles (TOV), remotely operated vehicles (ROV), various sonar platforms, and the Deepworker manned submersible.ARGOS drifter releases, satellite imagery, ichthyoplankton surveys, sea surface temperature, and diver census were combined to elucidate potential dispersal of fish spawning in this environment. Surveys are being compiled into a GIS to allow resource managers to gauge benthic resource status and distribution. Drifter studies have determined that within the ~ 30 days of larval life stage for fishes spawning at Tortugas South, larvae could reach as far downstream as Tampa Bay on the west Florida coast and CapeCanaveral on the east coast. Together with actual fish surveys and water mass delineation, this work demonstrates that the refuge status of this area endows it with tremendous downstream spillover and larval export potential for Florida reef habitats and promotes the maintenance of their fish communities.In Tortugas North, 30 randomly selected, permanent stations were established. Five stations were assigned to each of the following six areas: within Dry Tortugas National Park, falling north of the prevailing currents (Park North); within Dry Tortugas National Park, falling south of the prevailing currents (Park South); within the Ecological Reserve falling north of the prevailing currents (ReserveNorth); within the Ecological Reserve falling south of the prevailing currents (Reserve South); within areas immediately adjacent to these two strata, falling north of the prevailing currents (Out North); and within areas immediately adjacent to these two strata, falling south of the prevailing currents (Out South). Intensive characterization of these sites was conducted using multiple sonar techniques, TOV, ROV, diver-based digital video collection, diver-based fish census, towed fish capture, sediment particle-size, benthic chlorophyll analyses, and stable isotope analyses of primary producers, fish, and, shellfish. In order to complement and extend information from studies focused on the coral reef, we havetargeted the ecotone between the reef and adjacent, non-reef habitats as these areas are well-known in ecology for indicating changes in trophic relationships at the ecosystem scale. Such trophic changes are hypothesized to occur as top-down control of the system grows with protection of piscivorous fishes. Preliminary isotope data, in conjunction with our prior results from the west Florida shelf, suggest that the shallow water benthic habitats surrounding the coral reefs of TER will prove to be the source of a significant amount of the primary production ultimately fueling fish production throughout TER anddownstream throughout the range of larval fish dispersal. Therefore, the status and influence of the previously neglected, non-reef habitat within the refuge (comprising ~70% of TER) appears to be intimately tied to the health of the coral reef community proper.These data, collected in a biogeographic context, employing an integrated Before-After Control Impact design at multiple spatial scales, leave us poised to document and quantify the postimplementation effects of TER. Combined with the work at Tortugas South, this project represents amulti-disciplinary effort of sometimes disparate disciplines (fishery oceanography, benthic ecology, foodweb analysis, remote sensing/geography/landscape ecology, and resource management) and approaches (physical, biological, ecological). We expect the continuation of this effort to yield critical information for the management of TER and the evaluation of protected areas as a refuge for exploited species. (PDF contains 32 pages.)
    Keywords: Conservation ; Ecology ; Management ; Fisheries ; Refuge effect ; Biogeography ; Habitat characterization ; Spillover ; Tortugas Ecological Reserve
    Repository Name: AquaDocs
    Type: monograph
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