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  • 2020-2024  (166,906)
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  • 1
    Publication Date: 2024-06-15
    Description: The objective of this study is to determine the effects of ocean acidification (OA) on the survival, development and swimming behaviour of embryos of the deep-sea coral Desmophyllum pertusum (syn. Lophelia pertusa). Upon spawning, fertilized embryos were collected and exposed to two pCO2 treatments corresponding to present pCO2 conditions (400 ppm) and future pCO2 conditions predicted under scenario IPCC RCP8.5 for the end of the century (1000 ppm). We monitored survival daily and we measured swimming velocity on day 9 after spawning. Temperature and pH were measured every 24h, salinity was measured every other day, and water samples were collected during the first and last day of the experiment to determine total alkalinity (TA). This dataset includes data on the effects of ocean acidification on swimming velocity of larvae of the deep-sea coral Desmophyllum pertusum. Embryos were exposed to two acidification (pCO2) treatments: present pCO2 conditions (400 ppm) and future pCO2 conditions predicted under RCP8.5 for the end of the century (1000 ppm). After rearing the embryos in the respective treatments for nine days, we recorded the swimming behaviour of larvae with a video camera. Videos were analyzed with manual particle tracking, and here we report the swimming velocity and total traveled distance of larvae in each experimental treatment.
    Keywords: ASSEMBLE_Plus; Association of European Marine Biological Laboratories Expanded; Climate change; cold-water coral; DATE/TIME; Deep sea; early life history; early life stages; iAtlantic; Image analysis, NIH ImageJ, MTrackJ plugin; Integrated Assessment of Atlantic Marine Ecosystems in Space and Time; Laboratory experiment; Larvae; larval behaviour; physiology; Remote operated vehicle; ROV; Sample ID; Species; Species, unique identification (Semantic URI); Species, unique identification (URI); Speed, swimming; Swim distance; Time in hours; Tisler_Sampling_Lophelia_pertusa_4; Tisler_Sampling_Lophelia_pertusa_6; Tisler Reef, Skagerrak; Treatment
    Type: Dataset
    Format: text/tab-separated-values, 480 data points
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  • 2
    Publication Date: 2024-06-15
    Description: The objective of this study is to determine the effects of ocean acidification (OA) on the survival, development and swimming behaviour of embryos of the deep-sea coral Desmophyllum pertusum (syn. Lophelia pertusa). Upon spawning, fertilized embryos were collected and exposed to two pCO2 treatments corresponding to present pCO2 conditions (400 ppm) and future pCO2 conditions predicted under scenario IPCC RCP8.5 for the end of the century (1000 ppm). We monitored survival daily and we measured swimming velocity on day 9 after spawning. Temperature and pH were measured every 24h, salinity was measured every other day, and water samples were collected during the first and last day of the experiment to determine total alkalinity (TA). This dataset includes data on the effects of OA on embryo and larval survival of the deep-sea coral Desmophyllum pertusum. Embryos (age: first cleavage and 2 cell stage) were exposed to two acidification (pCO2) treatments: present pCO2 conditions (400 ppm) and future pCO2 conditions predicted under RCP8.5 for the end of the century (1000 ppm) and reared for a total of nine days. We counted embryos and larvae daily to determine larval survival under the two treatments.
    Keywords: ASSEMBLE_Plus; Association of European Marine Biological Laboratories Expanded; Climate change; cold-water coral; DATE/TIME; Deep sea; early life history; early life stages; iAtlantic; Integrated Assessment of Atlantic Marine Ecosystems in Space and Time; Laboratory experiment; Larvae; larval behaviour; pH; pH meter, Mettler Toledo, Seven2Go pH /Ion meter S8; physiology; Remote operated vehicle; Replicate; ROV; Salinity; Sample ID; Species; Species, unique identification (Semantic URI); Species, unique identification (URI); Temperature, water; Time in hours; Tisler_Sampling_Lophelia_pertusa_4; Tisler_Sampling_Lophelia_pertusa_6; Tisler Reef, Skagerrak; Treatment; Visual counts
    Type: Dataset
    Format: text/tab-separated-values, 1116 data points
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  • 3
    Publication Date: 2024-06-14
    Description: New inorganic and organic geochemical data from thucholite in the Upper Permian (Wuchiapingian) Kupferschiefer (T1) shale collected at the Polkowice-Sieroszowice Cu-Ag mine in Poland are presented. Thucholite, which forms spherical or granular clusters, appears scattered in the T1 dolomitic shale at the oxic-anoxic boundary occurring within the same shale member. The composition of thucholite concretions and the T1 shale differs by a higher content of U- and REE-enriched mineral phases within the thucholite concretions compared to the T1 shale, suggesting a different mineralising history. The differences also comprise higher Ntot, Ctot, Htot, Stot contents and higher C/N, C/S ratios in thucholite than in the T1 shale. The hydrocarbon composition of the thucholite and the surrounding T1 shale also varies. Both are dominated by polycyclic aromatic compounds and their phenyl derivatives. However, higher abundances of unsubstituted polycyclic aromatic hydrocarbons in the thucholite are indicative of its pyrogenic origin. Pyrolytic compounds such as benz[a]anthracene or benzo[a]pyrene are more typical of the thucholite than the T1 shale. Microscopic observations of the thucholite and its molecular composition suggest that it represents well-rounded small charcoal fragments. These charcoals were formed during low-temperature combustion, as confirmed by semifusinite reflectance values, indicating surface fire temperatures of about 400 °C, and the absence of the high-temperature pyrogenic polycyclic aromatic hydrocarbons. Charred detrital particles, likely the main source of insoluble organic matter in the thucholite, migrated to the sedimentary basin in the form of spherical carbonaceous particulates, which adsorbed uranium and REE in particular, which would further explain their different contents and sorption properties in the depositional environment. Finally, the difference in mineral content between thucholite and the T1 shale could also have been caused by microbes, which might have formed biofilms on mineral particles, and caused a change in the original mineral composition.
    Type: info:eu-repo/semantics/article
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  • 4
    Publication Date: 2024-06-14
    Type: info:eu-repo/semantics/report
    Format: application/pdf
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  • 5
    Publication Date: 2024-06-14
    Description: Severe flood losses have been on the rise, and this trend is expected to become increasingly prevalent in the future due to climate and socio-economic changes. Swiftly identifying flooded areas is crucial for mitigating socio-economic losses and facilitating effective recovery. Synthetic aperture radar (SAR) sensors are operational in all-weather, day-and-night conditions and offer a rapid, accurate, and cost-effective means of obtaining information for quick flood mapping. However, the complex nature of SAR images, such as speckle noise, coupled with the often absence of training/labeled samples, presents significant challenges in their processing procedures. To alleviate such hindrances, we can benefit from unsupervised classification approaches (also known as clustering). Clustering methods offer valuable insights into newly acquired datasets without the need for training or labeled samples. However, traditional clustering approaches are predominantly linear-based and overlook the spatial information of neighboring pixels during analysis. Thus, to attenuate these challenges, we propose a deep-learning (DL)-based clustering approach for flood detection (DC4Flood) using SAR images. The primary advantage of DC4Flood over existing DL-based clustering approaches lies in its ability to capture multiscale spatial information. This is achieved using multiple dilated convolutions with varying dilation rates and subsequently fusing the extracted multiscale information to effectively and efficiently analyze SAR images in an unsupervised manner. Extensive experiments conducted on SAR images from six different flood events demonstrate the effectiveness of the proposed DC4Flood. The code of the work will be available at https://github.com/Kasra2020/DC4Flood .
    Type: info:eu-repo/semantics/article
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  • 6
    Publication Date: 2024-06-14
    Description: Project “Saptarshi” was initiated by the National Centre for Geodesy, Indian Institute of Technology Kanpur to set up the modern space geodetic infrastructure in the country. This project primarily focuses on the establishment of an Indian Geodetic VLBI network. The purpose of this paper is to anticipate the potential impact of the geodetic VLBI network in India to the national and international scientific products. Saptarshi proposes to establish three VLBI stations along with a correlator at one facility. In this work, we investigate how adding proposed Indian VLBI antennas will affect terrestrial and celestial reference frames as well as Earth Orientation Parameters (EOP). Additionally, we shortly demonstrate scenario of VLBI observations of one of the Indian regional navigation satellite system called Navigation with Indian Constellation (NavIC) to determine its orbit. Two VLBI networks were simulated to observe the NAVIC satellite along with quasars to check how well the orbit of this satellite can be recovered from VLBI observations. To investigate the impact on the terrestrial reference frame, three types of 24-h sessions, IVS-R1 (legacy), IVS-VGOS (next generation VLBI), and IVS-AOV (Asia Oceania VLBI), were studied to examine the gain in precision of geodetic parameters when adding the proposed Indian VLBI antennas. IVS-type Intensive sessions were also investigated with the proposed Indian antennas to assess the improvement in the estimation of dUT1 as one important VLBI product. Furthermore, the u-v coverage of some radio sources of the southern hemisphere was compared utilizing observing networks with and without the proposed Indian antennas. Apart from that, we briefly discuss other benefits of the establishment of Indian geodetic VLBI in the scientific fields of atmosphere, metrology, and space missions.
    Type: info:eu-repo/semantics/article
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  • 7
    Publication Date: 2024-06-14
    Description: Abstract
    Description: The dataset contains the seismic weight drop data acquired in Private Reserve Santa Gracia, Chile. The data acquisition was conducted as a part of the EarthShape project in the subproject of Geophysical Imaging of the Deep EarthShape (GIDES). The seismic line was setup to cut across an existing borehole location with core and geophysical logging data available (Krone et al., 2021; Weckmann et al., 2020). The data was acquired to image the deep weathering zone identified by the borehole data across the seismic profile. Included in the datasets are the raw data of the CUBE data logger, SEG-Y data of the recorded shots, and the shot and receiver geometry data. A vital aspect of comprehending the interplay between geological and biological processes lies in the imaging of the critical zone, located deep beneath the surface, where the transition from unaltered bedrock to fragmented regolith occurs. It had been hypothesized that the depth of such weathering zone is dependent on the climate condition of the area. A more humid climate with higher precipitation will result in a deeper weathering front. As a part of the EarthShape project (SPP-1803 ‘EarthShape: Earth Surface Shaping by Biota’), specifically the Geophysical Imaging of the Deep EarthShape (GIDES - Grant No. KR 2073/5-1), we aim to image the weathering zone using the geophysical approach. Using the seismic method, we can differentiate different weathered layers based on the seismic velocity while also providing a 2D subsurface image of the critical zone. We conducted a seismic weight drop experiment in the Private Reserve Santa Gracia, Chile, to observe the depth of the weathering zone in a semi-arid climate and compare the resulting model with existing borehole data (Krone et al., 2021; Weckmann et al., 2020). The acquired data can then be used for multiple seismic imaging techniques, including body wave tomography and multichannel analysis of surface waves.
    Description: Other
    Description: The DFG Priority Program 1803 "EarthShape - Earth Surface Shaping by Biota" (2016-2022; https://www.earthshape.net/) explored between scientific disciplines and includes geoscientists and biologists to study from different viewpoints the complex question how microorganisms, animals, and plants influence the shape and development of the Earth’s surface over time scales from the present-day to the young geologic past. All study sites are located in the north-to-south trending Coastal Cordillera mountains of Chile, South America. These sites span from the Atacama Desert in the north to the Araucaria forests approximately 1300 km to the south. The site selection contains a large ecological and climate gradient ranging from very dry to humid climate conditions.
    Keywords: Geophysics ; seismic ; weight drop ; weathering zone ; critical zone ; bedrock ; granite ; passive seismic ; 3C sensor ; EarthShape ; Chile ; Coastal Cordillera ; Private Reserve Santa Gracia ; CONTROLLED_SOURCE_SEISMOLOGY 〉 REFRACTION ; CONTROLLED_SOURCE_SEISMOLOGY 〉 WEIGHT-DROP_SOURCE ; CONTROLLED_SOURCE_SEISMOLOGY 〉 NEAR_SURFACE ; PASSIVE_SEISMIC 〉 STATIONS ; SENSOR 〉 GEOPHONE ; SENSOR 〉 3-C ; LAND ; SEG-Y_DATA_FORMAT ; MINISEED_DATA_FORMAT ; CONTROLLED_SOURCE_SEISMOLOGY 〉 RAW_DATA ; CONTROLLED_SOURCE_SEISMOLOGY 〉 VERTICALLY_STACKED_DATA ; EARTH SCIENCE 〉 SOLID EARTH ; EARTH SCIENCE 〉 SOLID EARTH 〉 TECTONICS 〉 EARTHQUAKES 〉 SEISMIC PROFILE
    Type: Dataset , Dataset
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  • 8
    Publication Date: 2024-06-14
    Description: Gas chimneys and gas clouds in the subsurface media are known as one of the indications of possible petroleum reservoirs. Investigations of their properties are mostly initiated by seismic attribute interpretation on reflection seismic data. However, due to the complexity of their behavior and their difficult interpretation of seismic attributes, state-of-the-art methods are mostly required to be applied on the seismic data to prevent any misinterpretation. This is mostly done through attribute integration and multi-attribute analysis. This research presents a study on seismic attributes and integration on several 2D seismic reflection lines from the Gorgan Plain. It is located in Northeast Iran, on the western border of the region’s well-known Kopeh-Dagh fold and thrust belt, and southeastern border of the South Caspian Basin. Hydrocarbon systems of the Gorgan Plain are poorly known and have not been widely studied, but according to preliminary investigations, this region has the potential for hydrocarbon occurrences. The aim of this study is to investigate presence and then delaminate the affected area of possible gas chimneys that are related to possible hydrocarbon reservoirs. Gas chimneys are assumed to be created due to the routes, mostly made by faults, that provoke light hydrocarbons components to migrate toward the surface. Preliminary interpretations of seismic reflection data in this study revealed that at least two gas chimneys occurred within the Gorgan Plain. As it was mentioned, since they are mostly due to the faulting above the hydrocarbon reservoir, gas chimney and heavy faulting might exhibit the same effects on the seismic data and then on its attributes, which are amplitude reduction and high damping on energies, distortion of the waveshape and seismic velocity reduction. Thus, care should be taken in separation of these two different geologic phenomena on seismic attributes. This also was done in this study through utilized integration of the most relevant seismic attributes such as Instantaneous-phase, Chaos, Variance and Remove-bias attributes. Based on the result of interpretations and according to the evolution of the basin and its structural reconstruction on other studies, gas chimneys of the Gorgan Plain, are in relation to the operation of fault zones in Cenozoic erathem in the region. These fault zones which cut the entire Cenozoic erathem, create the pathway for vertical migration of hydrocarbons through Cheleken formation (reservoir rock) and its overburden sedimentary sequences. In other words, operation of fault zones within Cenozoic sedimentary sequence, is the main reason for gas seepage in the Gorgan Plain, which is also shown in seismic data.
    Type: Article , PeerReviewed
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  • 9
    Publication Date: 2024-06-14
    Description: Highlights • δ13C and δ18O profiles increase from exterior to interior until reaching a plateau. • Primary Layer δ13C reflects the δ13C of the Dissolved Inorganic Carbon. • In high pCO2 experiments, δ13C and δ18O closer to equilibrium fields. • Brachiopods grow according to an incremental growth model. Abstract Brachiopod shells are ubiquitous since the Early Cambrian up to now. As they secrete a shell made of low-magnesium calcite, more resistant to diagenesis than biocarbonates richer in Mg, their geochemical signatures are generally considered a powerful tool for paleo-environmental and paleo-climatic reconstructions. However, gaps in knowledge still remain on the underlying controls of the shell chemistry, in particular at a high spatial resolution. In this study, in situ oxygen and carbon isotope measurements by SIMS (Secondary Ion Mass Spectrometry) were performed in brachiopod shells of the cold-temperate water species Magellania venosa, constituted of a primary and a secondary layer. The individual specimens studied here grew under controlled conditions mimicking the natural environment and in experiments under low-pH (high pCO2) and high-temperature conditions. Transversal carbon and oxygen profiles showed a “brachiopod pattern” typical of extant two-layered brachiopods, with the primary layer depleted in 18O and 13C relative to equilibrium and the secondary layer showing a gradual increasing trend until reaching a near-equilibrium plateau. Overall, shells cultured at low pH were found to have δ18O and δ13C values closer to equilibrium when compared to shells from the control experiment. These near-equilibrium values may reflect a decrease in shell precipitation rate, leading to less kinetic effects, and/or a more rapid kinetics for the equilibration between DIC species and water. By close pairing of seawater δ18O and δ13C to that of shell microstructure, our study enables us to derive layer-specific C and O enrichment factors, which show the extent of pH and temperature effects superimposed on the seawater δ18O and DIC δ13C signal inherited. Finally, we show that during brachiopod shell growth, newly precipitated calcite is added to the calcite already existing, thus empirically validating the conceptual accretionary growth model proposed by Ackerly (1989).
    Type: Article , PeerReviewed , info:eu-repo/semantics/article
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  • 10
    Publication Date: 2024-06-14
    Description: The Earth's magnetic field can provide reliable directional information, allowing migrating animals to orient themselves using a magnetic compass or estimate their position relative to a target using map-based orientation. Here we show for the first time that young, inexperienced herring (Clupea harengus, Ch) have a magnetic compass when they migrate hundreds of kilometres to their feeding grounds. In birds, such as the European robin (Erithacus rubecula), radical pair-based magnetoreception involving cryptochrome 4 (ErCRY4) was demonstrated; the molecular basis of magnetoreception in fish is still elusive. We show that cry4 expression in the eye of herring is upregulated during the migratory season, but not before, indicating a possible use for migration. The amino acid structure of herring ChCRY4 shows four tryptophans and a flavin adenine dinucleotide-binding site, a prerequisite for a magnetic receptor. Using homology modelling, we successfully reconstructed ChCRY4 of herring, DrCRY4 of zebrafish (Danio rerio) and StCRY4 of brown trout (Salmo trutta) and showed that ChCRY4, DrCRY4 and ErCRY4a, but not StCRY4, exhibit very comparable dynamic behaviour. The electron transfer could take place in ChCRY4 in a similar way to ErCRY4a. The combined behavioural, transcriptomic and simulation experiments provide evidence that CRY4 could act as a magnetoreceptor in Atlantic herring.
    Type: Article , PeerReviewed
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