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  • Symbiodiniaceae  (12)
  • Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu  (12)
  • 2020-2023  (12)
Collection
Keywords
Publisher
  • Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu  (12)
  • MDPI  (1)
Years
  • 2020-2023  (12)
Year
  • 1
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    Viral consortia in Stony Coral Tissue Loss Disease- affected, disease-exposed, and disease-unexposed coral colonies from a transmission experiment conducted on samples collected from Rupert’s Rock in St. Thomas, U.S. Virgin Islands in 2019 (2022)
    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Details
    Publication Date: 2022-11-04
    Description: Dataset: Viral Consortia in Stony Corals
    Description: To understand the extent to which (if any) viruses are associated with stony coral tissue loss disease (SCTLD) in stony corals of the U.S. Virgin Islands, we leveraged viral metatranscriptomes generated from SCTLD-affected, SCTLD-exposed, and control (unexposed) coral holobionts sampled during a SCTLD transmission experiment. Sequence data is available in NCBI Genbank under BioProject accession PRJNA788911. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/875283
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1928609
    Keywords: Symbiodiniaceae ; stony coral tissue loss disease ; alphaflexivirus ; +ssRNA virus
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
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  • 2
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    Survivorship of newly settled polyps of Antillogorgia bipinnata inoculated with one of five genotypes of Breviolum antillogorgium and reared at 26 and 30 degrees Celsius. (2021)
    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Details
    Publication Date: 2022-10-31
    Description: Dataset: Average polyp survival – Fall 2018 experiment
    Description: Survivorship of newly settled polyps of Antillogorgia bipinnata inoculated with one of five genotypes of Breviolum antillogorgium and reared at 26 and 30 degrees Celsius. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/855116
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1559286
    Keywords: Symbiosis ; Symbiodiniaceae ; Octocorals ; Thermal tolerance
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
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  • 3
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    An investigation of Symbiodiniaceae communities via ITS-2 rDNA amplicon sequencing in Acropora millepora corals from the Great Barrier Reef following exposure to stressors in October 2014 (2022)
    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Details
    Publication Date: 2022-10-31
    Description: Dataset: Symbiodiniaceae communities in corals with ITS-2 rDNA amplicon sequencing
    Description: Symbiodiniaceae communities were investigated at three locations on the Great Barrier Reef in October 2014. Acropora millepora samples from Davies Reef lagoon (18°30′3.96′′S, 147°22′48′′E), Rib Reef (18°28′53.4′′S, 146°52′24.96′′E), and Pandora Island (18°48′45′′S, 146°25′59.16′′E), were exposed to various stressors including pCO2, heat, bacteria, all of these, or none of these (control). This dataset lists accessions and collection information for ITS-2 rDNA amplicon data that are available at the National Center for Biotechnology Information (NCBI) under BioProject PRJNA596498. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/844431
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1635798
    Keywords: Acropora millepora ; Alpha diversity ; Beta diversity ; Climate change ; Coral ; Symbiodiniaceae
    Repository Name: Woods Hole Open Access Server
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  • 4
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    Physiological data from Breviolum antillogorgia genotypes grown in laboratory growth chambers in Los Angeles, CA in 2021. (2022)
    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Details
    Publication Date: 2022-10-31
    Description: Dataset: Physiological data
    Description: Five genotypes of Breviolum Antillogorgia were grown at three temperatures where growth rate, carrying capacity, respiration, gross photosynthesis, and new photosynthesis were quantified. This work was conducted in laboratory growth chambers in Los Angeles, California, USA in 2021. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/874587
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1559105
    Keywords: Symbiodiniaceae ; Symbionts ; Genetic variation ; Mutualism
    Repository Name: Woods Hole Open Access Server
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  • 5
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    Measurements of respiration, net photosynthesis, and gross photosynthesis of five different genotypes of Symbiodinium microadriaticum in culture at three different temperatures (2022)
    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Details
    Publication Date: 2022-10-31
    Description: Dataset: Culture Data
    Description: This dataset includes measurements of respiration, net photosynthesis, and gross photosynthesis of five different genotypes of Symbiodinium microadriaticum in culture at three different temperatures. This study was conducted in laboratory growth chambers in Los Angeles, California, USA in October 2019. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/874597
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1559105
    Keywords: Symbiodiniaceae ; Symbionts ; Genetic variation ; Mutualism
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
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  • 6
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    Measurements of per-capita growth and carrying capacity of five different genotypes of Symbiodinium microadriaticum in culture at three different temperatures (2022)
    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Details
    Publication Date: 2022-10-31
    Description: Dataset: Population Growth
    Description: This dataset includes measurements of per-capita growth and carrying capacity of five different genotypes of Symbiodinium microadriaticum in culture at three different temperatures. This work was conducted in laboratory growth chambers in Los Angeles, California, USA, in May and July 2019. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/874619
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1559105
    Keywords: Symbiodiniaceae ; Symbionts ; Genetic variation ; Mutualism
    Repository Name: Woods Hole Open Access Server
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  • 7
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    Responses of polyps (survival, inoculation time, time to strobilation, time to ephyra production, bud production, ephyra production) to exposure to five different algal symbiont genotypes (2022)
    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Details
    Publication Date: 2022-10-31
    Description: Dataset: Polyp Fitness
    Description: This dataset includes measurements of the responses of polyps (survival, inoculation time, time to strobilation, time to ephyra production, bud production, ephyra production) to exposure to five different algal symbiont genotypes. This work was conducted in laboratory growth chambers in Los Angeles, California, USA. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/874609
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1559105
    Keywords: Symbiodiniaceae ; Symbionts ; Genetic variation ; Mutualism
    Repository Name: Woods Hole Open Access Server
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  • 8
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    Biological turnover of acrylate and dimethylsulphoniopropionate from coral reefs sampled in Moorea, French Polynesia in April 2018 (2022)
    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Details
    Publication Date: 2022-10-31
    Description: Dataset: Acrylate and DMSP Turnover
    Description: Shallow-water coral reefs hold large quantities of acrylate and its precursor dimethylsulfoniopropionate (DMSP). The main sources of acrylate in coral reefs are from the coral algal symbionts in the family Symbiodiniaceae and from the photolysis of dissolved organic matter. Heterotrophic consumption is the main loss for these compounds, albeit these processes are poorly characterized. This dataset contains rate-constant data for the biological consumption of dissolved acrylate and DMSP in near-surface seawater collected from a Mo’orea coral reef, French Polynesia, and the offshore open Pacific Ocean. The coral reef and Pacific Ocean stations were located offshore from the UC Berkeley Gump Research Station. Samples were collected from April 6 to April 24, 2018. Details of the sampling and experimental procedures for this dataset are reported in Xue et al. (2022). For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/879158
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1756907
    Keywords: Acrylic acid ; DMSO ; DMSP ; Dimethylsulfoxide ; DMS ; Coral ; Symbiodiniaceae
    Repository Name: Woods Hole Open Access Server
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  • 9
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    Concentrations of acrylate and dimethylsulphoniopropionate from the surface of coral reefs sampled in Moorea, French Polynesia in April 2018 (2022)
    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Details
    Publication Date: 2022-10-31
    Description: Dataset: Acrylate and DMSP Concentrations
    Description: Shallow-water coral reefs hold large quantities of acrylate and its precursor dimethylsulfoniopropionate (DMSP). The main sources of acrylate in coral reefs are from the coral algal symbionts in the family Symbiodiniaceae and from the photolysis of dissolved organic matter. Heterotrophic consumption is the main loss for these compounds, albeit these processes are poorly characterized. This dataset contains acrylate, DMSP, and dimethylsulfoxide (DMSO) concentrations in dissolved and unfiltered seawater samples that were collected from near-surface seawater in a Mo’orea coral reef, French Polynesia, and the offshore open Pacific Ocean. The coral reef and Pacific Ocean stations were located offshore from the UC Berkeley Gump Research Station. Samples were collected from April 6 to April 24, 2018. Details of the sampling and experimental procedures for this dataset are reported in Xue et al. (2022). For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/879142
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1756907
    Keywords: Acrylic acid ; DMSO ; DMSP ; Dimethylsulfoxide ; DMS ; Coral ; Symbiodiniaceae
    Repository Name: Woods Hole Open Access Server
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  • 10
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    Cell counts in newly settled polyps of Antillogorgia bipinnata inoculated with one of six genotypes of Breviolum antillogorgium and reared at 26 and 30 degrees Celsius (2021)
    Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu
    Details
    Publication Date: 2022-10-31
    Description: Dataset: Cell counts in polyps – Fall 2018 experiment
    Description: Cell counts in newly settled polyps of Antillogorgia bipinnata inoculated with one of six genotypes of Breviolum antillogorgium and reared at 26 and 30 degrees Celsius. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/809388
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-1559286
    Keywords: Symbiosis ; Symbiodiniaceae ; Octocorals ; Thermal tolerance
    Repository Name: Woods Hole Open Access Server
    Type: Dataset
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