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  • Springer Nature  (1,070,392)
  • Wiley  (1,037,727)
  • Oxford University Press  (428,981)
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  • 1
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    Impact of green and blue‐green light on the growth, pigment concentration, and fatty acid unsaturation in the microalga Monoraphidium braunii (2024)
    Wiley
    Details
    Publication Date: 2024-06-14
    Description: The spectral composition of light is an important factor for the metabolism of photosynthetic organisms. Several blue light-regulated metabolic processes have already been identified in the industrially relevant microalga Monoraphidium braunii. However, little is known about the spectral impact on this species' growth, fatty acid (FA), and pigment composition. In this study, M. braunii was cultivated under different light spectra (white light: 400–700 nm, blue light: 400–550 nm, green light: 450–600 nm, and red light: 580–700 nm) at 25°C for 96 h. The growth was monitored daily. Additionally, the FA composition, and pigment concentration was analyzed after 96 h. The highest biomass production was observed upon white light and red light irradiation. However, green light also led to comparably high biomass production, fueling the scientific debate about the contribution of weakly absorbed light wavelengths to microalgal biomass production. All light spectra (white, blue, and green) that comprised blue-green light (450–550 nm) led to a higher degree of FA unsaturation and a greater concentration of all identified pigments than red light. These results further contribute to the growing understanding that blue-green light is an essential trigger for maximized pigment concentration and FA unsaturation in green microalgae.
    Type: Article , PeerReviewed
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  • 2
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    UXO and environmental risk factors impacting EOD operations in German waters** (2024)
    Wiley
    Details
    Publication Date: 2024-06-14
    Description: This article presents risk factors that are associated with the handling of unexploded ordnance (UXO) during explosive ordnance disposal (EOD) operations in German waters. The construction of offshore wind parks and the German immediate action program are expected to increase the number of EOD operations. Existing literature and guidelines do not offer a structured and reproducible framework for assessing EOD risk. To fill this gap, a network of EOD risk factors was developed by means of a literature review and validation via expert consultation. The study was scoped to “personnel and equipment at the EOD location” as the risk receptor and “undesired detonation” as the undesired event under investigation. Factors are subdivided into UXO factors that depend on the object that should be handled and factors that describe the object's surrounding environment. While the former can be researched by an EOD expert, the latter must be measured on site or acquired from a model. Each of these factors contributes to risk, some directly and others indirectly via other factors. The complexity of the resulting network, with its 33 factors, demonstrates the need for a reliable and reproducible model to quantify EOD risk. Its purpose is not to replace EOD experts but to aid them in their decision‐making process. Such a tool can provide valuable support for the high‐cost and high‐risk EOD operations.
    Type: Article , PeerReviewed , info:eu-repo/semantics/article
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  • 3
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    Suboptimal environmental conditions prolong phage epidemics in bacterial populations (2024)
    Wiley
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    Publication Date: 2024-06-14
    Description: Infections by filamentous phages, which are usually nonlethal to the bacterial cells, influence bacterial fitness in various ways. While phage-encoded accessory genes, for example virulence genes, can be highly beneficial, the production of viral particles is energetically costly and often reduces bacterial growth. Consequently, if costs outweigh benefits, bacteria evolve resistance, which can shorten phage epidemics. Abiotic conditions are known to influence the net-fitness effect for infected bacteria. Their impact on the dynamics and trajectories of host resistance evolution, however, remains yet unknown. To address this, we experimentally evolved the bacterium Vibrio alginolyticus in the presence of a filamentous phage at three different salinity levels, that is (1) ambient, (2) 50% reduction and (3) fluctuations between reduced and ambient. In all three salinities, bacteria rapidly acquired resistance through super infection exclusion (SIE), whereby phage-infected cells acquired immunity at the cost of reduced growth. Over time, SIE was gradually replaced by evolutionary fitter surface receptor mutants (SRM). This replacement was significantly faster at ambient and fluctuating conditions compared with the low saline environment. Our experimentally parameterized mathematical model explains that suboptimal environmental conditions, in which bacterial growth is slower, slow down phage resistance evolution ultimately prolonging phage epidemics. Our results may explain the high prevalence of filamentous phages in natural environments where bacteria are frequently exposed to suboptimal conditions and constantly shifting selections regimes. Thus, our future ocean may favour the emergence of phage-born pathogenic bacteria and impose a greater risk for disease outbreaks, impacting not only marine animals but also humans.
    Type: Article , PeerReviewed , info:eu-repo/semantics/article
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  • 4
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    Reconstruction of Cenozoic δ11Bsw Using A Gaussian Process (2024)
    AGU (American Geophysical Union) | Wiley
    Details
    Publication Date: 2024-06-14
    Description: Key Points: - We reconstruct the temporal evolution of seawater isotope ratios of boron, strontium, lithium, and osmium over the last 65 million years - The evolution of seawater boron isotope ratio shows similarity to the evolution of strontium, lithium and osmium isotope ratios - Randomly drawn, smooth time series are provided for use in uncertainty propagation in calculation of palaeo pH The boron isotope ratio of seawater (δ11Bsw) is a parameter which must be known to reconstruct palaeo pH and CO2 from boron isotope measurements of marine carbonates. Beyond a few million years ago, δ11Bsw is likely to have been different to modern. Palaeo δ11Bsw can be estimated by simultaneously constraining the vertical gradients in foraminiferal δ11B (Δδ11B) and pH (ΔpH). A number of subtly different techniques have been used to estimate ΔpH in the past, all broadly based on assumptions about vertical gradients in oxygen, and/or carbon, or other carbonate system constraints. In this work we pull together existing data from previous studies, alongside a constraint on the rate of change of δ11Bsw from modeling. We combine this information in an overarching statistical framework called a Gaussian Process. The Gaussian Process technique allows us to bring together data and constraints on the rate of change in δ11Bsw to generate random plausible evolutions of δ11Bsw. We reconstruct δ11Bsw, and by extension palaeo pH, across the last 65Myr using this novel methodology. Reconstructed δ11Bsw is compared to other seawater isotope ratios, namely ,87/86 Sr, 187/188 Os , and δ7Li, which we also reconstruct with Gaussian Processes. Our method provides a template for incorporation of future δ11Bsw constraints, and a mechanism for propagation of uncertainty in δ11Bsw into future studies.
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  • 5
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    Integrative taxonomy of new neomphaloidean gastropods from deep-sea hot vents of the southwestern Pacific (2024)
    Oxford University Press
    Details
    Publication Date: 2024-06-13
    Description: Neomphaloidean gastropods are endemic to chemosynthesis-based ecosystems ranging from hot vents to organic falls, and their diversity and evolutionary history remain poorly understood. In the southwestern Pacific, deep-sea hydrothermal vents on back-arc basins and volcanic arcs are found in three geographically secluded regions: a western region around Manus Basin, an eastern region around North Fiji and Lau Basins, and the intermediate Woodlark Basin where active venting was confirmed only recently, on the 2019 R/V L’Atalante CHUBACARC expedition. Although various lineages of neomphaloidean snails have been detected, typically restricted to one of the three regions, some of these have remained without names. Here, we use integrative taxonomy to describe three of these species: the neomphalid Symmetromphalus mithril sp. nov. from Woodlark Basin and the peltospirids Symmetriapelta becki sp. nov. from the eastern region and Symmetriapelta radiata sp. nov. from Woodlark Basin. A combination of shell sculpture and radular characters allow the morphological separation of these new species from their described congeners. A molecular phylogeny reconstructed from 570 bp of the mitochondrial cytochrome c oxidase subunit I gene confirmed the placement of the three new species in their respective genera and the superfamily Neomphaloidea. The finding of these new gastropods, particularly the ones from the Woodlark Basin, provides insights and implications on the historical role of Woodlark as a dispersing centre, in addition to highlighting the uniqueness of the Woodlark faunal community.
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  • 6
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    Regional Variation in Extratropical North Atlantic Air‐Sea Interaction 1960–2020 (2024)
    AGU (American Geophysical Union) | Wiley
    Details
    Publication Date: 2024-06-13
    Description: Air-sea interaction in late boreal winter is studied over the extratropical North Atlantic (NA) during 1960–2020 by examining the relationship between sea-surface temperature (SST) and total turbulent heat flux (THF). The two quantities are positively correlated on interannual timescales over the central-midlatitude and subpolar NA, suggesting the atmosphere on average drives SST and THF variability is independent of SST. On decadal timescales and over the central-midlatitude NA the correlation is negative, suggesting ocean processes on average drive SST and THF variability is sensitive to SST. The correlation is positive over the subpolar NA. There, interannual and decadal THF variability is governed by the North Atlantic Oscillation (NAO). During the major late 20th and early 21st century SST increase in the subpolar NA diminishing oceanic heat loss associated with a weakening NAO was observed. This study suggests that the atmosphere is more sensitive to SST over the central-midlatitude than subpolar NA. Key Points: - Regional variation in the nature of air-sea interaction over the extratropical North Atlantic (NA) north of 35°N - Timescale dependence in relationship between sea-surface temperature (SST) and turbulent heat flux over the central-midlatitude NA - The atmosphere is more sensitive to SST variability over the central-midlatitude than subpolar NA
    Type: Article , PeerReviewed , info:eu-repo/semantics/article
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  • 7
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    The last 1100 years of activity of La Fossa caldera, Vulcano Island (Italy): new insights into stratigraphy, chronology, and landscape evolution (2024)
    Springer Nature
    Details
    Publication Date: 2024-06-13
    Description: A detailed study of past eruptive activity is crucial to understanding volcanic systems and associated hazards. We present a meticulous stratigraphic analysis, a comprehensive chronological reconstruction, thorough tephra mapping, and a detailed analysis of the interplay between primary and secondary volcanic processes of the post-900 AD activity of La Fossa caldera, including the two main systems of La Fossa volcano and Vulcanello cones (Vulcano Island, Italy). Our analyses demonstrate how the recent volcanic activity of La Fossa caldera is primarily characterized by effusive and Strombolian activity and Vulcanian eruptions, combined with sporadic sub-Plinian events and both impulsive and long-lasting phreatic explosions, all of which have the capacity to severely impact the entire northern sector of Vulcano island. We document a total of 30 eruptions, 25 from the La Fossa volcano and 5 from Vulcanello cones, consisting of ash to lapilli deposits and fields of ballistic bombs and blocks. Volcanic activity alternated with significant erosional phases and volcaniclastic re-sedimentation. Large-scale secondary erosion processes occur in response to the widespread deposition of fine-grained ash blankets, both onto the active cone of La Fossa and the watersheds conveying their waters into the La Fossa caldera. The continuous increase in ground height above sea level, particularly in the western sector of the caldera depression where key infrastructure is situated, is primarily attributed to long-term alluvial processes. We demonstrate how a specific methodological approach is key to the characterization and hazard assessment of low-to-high intensity volcanic activity, where tephra is emitted over long time periods and is intercalated with phases of erosion and re-sedimentation.
    Description: Open access funding provided by Istituto Nazionale di Geofisica e Vulcanologia within the CRUI-CARE Agreement.
    Description: Published
    Description: 47
    Description: OSV2: Complessità dei processi vulcanici: approcci multidisciplinari e multiparametrici
    Description: JCR Journal
    Keywords: Active caldera; Aeolian archipelago; Historical eruptions; Island of Vulcano; Tephra; Volcano stratigraphy ; 04.08. Volcanology
    Repository Name: Istituto Nazionale di Geofisica e Vulcanologia (INGV)
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  • 8
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    COI metabarcoding of large benthic Foraminifera: Method validation for application in ecological studies (2022)
    Wiley
    In:  Ecology and Evolution vol. 12 no. e9549 | H2020 European Institute of Innovation and Technology, Grant/Award Number: 813360; Nederlandse Organisatie voor Wetenschappelijk Onderzoek, Grant/ Award Number: 16.161.301
    Details
    Publication Date: 2024-06-13
    Description: Monitoring community composition of Foraminifera (single-celled marine protists) pro-vides valuable insights into environmental conditions in marine ecosystems. Despitethe efficiency of environmental DNA (eDNA) and bulk-sample DNA (bulk-DNA) me-tabarcoding to assess the presence of multiple taxa, this has not been straightforwardfor Foraminifera partially due to the high genetic variability in widely used ribosomalmarkers. Here, we test the correctness in retrieving foraminiferal communities by me-tabarcoding of mock communities, bulk-DNA from coral reef sediment samples, andeDNA from their associated ethanol preservative using the recently sequenced cy-tochrome c oxidase subunit 1 (COI) marker. To assess the detection success, we com-pared our results with large benthic foraminiferal communities previously reportedfrom the same sampling sites. Results from our mock communities demonstrate thatall species were detected in two mock communities and all but one in the remainingfour. Technical replicates were highly similar in number of reads for each assigned ASVin both the mock communities and bulk-DNA samples. Bulk-DNA showed a signifi-cantly higher species richness than their associated eDNA samples, and also detectedadditional species to what was already reported at the specific sites. Our study con-firms that metabarcoding using the foraminiferal COI marker adequately retrieves thediversity and community composition of both the mock communities and the bulk-DNA samples. With its decreased variability compared with the commonly used nu-clear 18 S rRNA, the COI marker renders bulk-DNA metabarcoding a powerful tool toassess foraminiferal community composition under the condition that the referencedatabase is adequate to the target taxa.
    Keywords: bulk-sample ; DNA ; community composition ; coral reef ; environmental DNA ; foraminifera ; metabarcoding
    Repository Name: National Museum of Natural History, Netherlands
    Type: info:eu-repo/semantics/article
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  • 9
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    Comparing environmental impacts of deep‐seabed and land‐based mining: A defensible framework (2024)
    Wiley
    Details
    Publication Date: 2024-06-12
    Description: The crises of climate change and biodiversity loss are interlinked and must be addressed jointly. A proposed solution for reducing reliance on fossil fuels, and thus mitigating climate change, is the transition from conventional combustion-engine to electric vehicles. This transition currently requires additional mineral resources, such as nickel and cobalt used in car batteries, presently obtained from land-based mines. Most options to meet this demand are associated with some biodiversity loss. One proposal is to mine the deep seabed, a vast, relatively pristine and mostly unexplored region of our planet. Few comparisons of environmental impacts of solely expanding land-based mining versus extending mining to the deep seabed for the additional resources exist and for biodiversity only qualitative. Here, we present a framework that facilitates a holistic comparison of relative ecosystem impacts by mining, using empirical data from relevant environmental metrics. This framework (Environmental Impact Wheel) includes a suite of physicochemical and biological components, rather than a few selected metrics, surrogates, or proxies. It is modified from the “recovery wheel” presented in the International Standards for the Practice of Ecological Restoration to address impacts rather than recovery. The wheel includes six attributes (physical condition, community composition, structural diversity, ecosystem function, external exchanges and absence of threats). Each has 3–5 sub attributes, in turn measured with several indicators. The framework includes five steps: (1) identifying geographic scope; (2) identifying relevant spatiotemporal scales; (3) selecting relevant indicators for each sub-attribute; (4) aggregating changes in indicators to scores; and (5) generating Environmental Impact Wheels for targeted comparisons. To move forward comparisons of land-based with deep seabed mining, thresholds of the indicators that reflect the range in severity of environmental impacts are needed. Indicators should be based on clearly articulated environmental goals, with objectives and targets that are specific, measurable, achievable, relevant, and time bound.
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  • 10
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    Giant eggs in a deep‐sea squid (2024)
    Wiley
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    Publication Date: 2024-06-12
    Description: The deep-sea water column below 200 m is a vast three-dimensional habitat with an enormous but largely unexplored biodiversity (Robison, 2009). Cephalopod mollusks are abundant in the deep sea and are important prey for many kinds of predators. Still, most deep-sea cephalopods have never been observed alive in their natural habitat and their reproductive biology remains poorly documented. In March of 2015, at a depth of 2566 m, we observed a female squid of an undescribed species but likely belonging to the Gonatidae, carrying few but exceptionally large eggs in her arms. This raises questions as to how these and other related animals reproduce in the deep sea, an environment that is generally characterized by darkness, low temperature, reduced oxygen, limited food availability, and low population densities. The authors were conducting dives with deep-sea robots (remotely operated vehicles or ROVs) equipped with cameras in the deep basins of the Gulf of California, to investigate how deep-sea fauna are distributed in relation to the extensive low-oxygen zones in the region (Gilly et al., 2013). The squid (Individual 1, Table 1) we observed with an ROV at 2566 m in the Gulf of California in 2015 was carrying 30–40 large eggs (average maximum diameter 11.2 mm, n = 5; measured eggs were 11.4, 10.4, 11.5, 11.7 and 11 mm maximum diameter) embedded in a small external egg sheet that did not extend beyond the arm tips. The size of the eggs was similar to those of two squid (Individuals 2 and 3, Table 1) that were observed close to the seafloor during earlier expeditions in the same region.
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