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  • Elsevier  (77,755)
  • American Chemical Society  (24,715)
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  • 1
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    Elsevier
    In:  Molecular Phylogenetics and Evolution, 21 (3). pp. 388-397.
    Publication Date: 2021-07-05
    Description: In this paper we examine the phylogenetic relationships of the Octopoda utilizing molecular sequence data from the cytochrome c oxidase subunit I (COI) gene and compare results from analyses of molecular data with classifications and phylogenies based on previous morphological studies. Partial COI sequences (657 bp, excluding primers) were obtained from 28 species representing most of the diversity in the Order Octopoda, along with a sequence from the established sister taxon to the Octopoda, Vampyroteuthis infernalis. Our results exhibit a number of basic differences from inferences based on standard morphological data. We attempt to resolve these differences based on our confidence in various morphological features. An important finding is the failure of the molecular data to support the monophyly of the Octopodidae. This family contains over 90% of the species in the Suborder Incirrata and has always been difficult to define. Statistical tests constraining Octopodidae monophyly by use of parsimony and maximum-likelihood techniques suggest that all incirrates may be derived from octopodids.
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  • 2
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    Elsevier
    In:  Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology, 129 (4). pp. 787-796.
    Publication Date: 2021-07-01
    Description: The complete amino acid sequence of squid Todarodes pacificus troponin C (TnC), which was shown to bind only 1 mol Ca2+/mol, was determined by both the Edman and cDNA methods. The squid TnC is composed of 147 amino acids including an unblocked Pro at the N-terminus and the calculated molecular weight is 17 003.9. Among the four potential Ca2+-binding sites, namely sites I–IV from the N-terminus, only site IV completely satisfied the consensus amino acid sequence for the active Ca2+-binding loop. This indicates that squid TnC possesses a single Ca2+-binding site at the site IV as scallop TnCs [Nishita et al., J. Biol. Chem. 269 (1994) 3464–3468; Ojima et al., Arch. Biochem. Biophys. 311 (1994) 272–276). The sequence homology of squid TnC to TnCs of scallop, arthropods, and rabbit was 61%, 31–38%, and 31%, respectively. In the sequence of the central D/E-helix region of squid and scallop TnCs, a deletion of three amino acids was required to maximize the homology with the other TnCs.
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  • 3
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    Elsevier
    In:  Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology, 130 (1). pp. 117-123.
    Publication Date: 2021-07-01
    Description: Trypsin inhibitor was purified from the hepatopancreas of squid (Todarodes pacificus). The final inhibitor preparation was nearly homogeneous by SDS-PAGE with an estimated molecular weight of approximately 6300. The squid trypsin inhibitor was acid- and heat-stable, and active against trypsins from the pyloric ceca of starfish (Asterias amurensis) and saury (Cololabis saira) and porcine pancreatic trypsin. Amino acid composition of the squid trypsin inhibitor was compared with other invertebrate trypsin inhibitors. The squid trypsin inhibitor inhibited the autolysis of walleye pollock (Theragra chalcogramma) myofibrillar proteins.
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  • 4
    Publication Date: 2021-06-25
    Description: The beaks of 10 cephalopod species were found in the diet of foraging and moulting king penguins (Aptenodytes patagonicus) from a breeding colony at Volunteer Beach, Falkland Islands during austral winter (September/October 1996). A total of 486 lower cephalopod beaks were collected, identified and measured (LRL: lower rostral length). Six cephalopod families occurred in the penguins’ diet with Onychoteuthidae being the most abundant (256 lower beaks) and represented by Moroteuthis ingens (168; LRL range 2.1–6.8 mm), Moroteuthis knipovitchi (79; LRL range 1.9–5.5 mm), and Kondakovia longimana (9; LRL range 2.1–7.4 mm). Other families were Ommastrephidae (135) with Martialia hyadesi (127; LRL range 2.6–8.7 mm), Illex argentinus (6; LRL range 5.0–6.0 mm), and Ommastrephes bartrami (2; LRL range 7.9–8.8 mm); Loliginidae with Loligo gahi (60; LRL range 0.8–2.1 mm); Gonatidae with Gonatus antarcticus (28; LRL range 1.3–3.3 mm); Neoteuthidae with Alluroteuthis antarcticus (4; LRL range 2.4–3.9 mm), and Histioteuthidae with Histioteuthis eltaninae (3; LRL range 3.3–3.4 mm). Allometric equations were used to relate lower rostral beak length with cephalopod body size and mass. M. ingens was the dominating cephalopod prey in terms of numbers (n=168), whereas M. hyadesi was most important in terms of biomass (64 682 g). The present study provides first information on the cephalopod prey of Falkland Islands king penguins. The data suggest that penguins take squid at coastal islands slope regions as well as in oceanic waters which demonstrates their ability to forage in a wide geographical area and to alternate between specific foraging sites. Possible competition with the commercial squid fishery off the Falkland Islands is discussed.
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  • 5
    Publication Date: 2021-06-25
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  • 6
    Publication Date: 2021-03-11
    Description: High-resolution seismic profiles (PARASOUND, 4 kHz) of the western Laptev Sea continental margin and the adjacent Vilkitsky Strait were studied in order to gain new evidence about the Weichselian glaciations in Central Siberia and to test reconstructions of maximum ice sheet extents. Four regionally correlatable seismic units, named I (youngest) to IV, were identified in the upper Quaternary sedimentary succession: (I) a thin drape; (II) prograding wedge-shaped deposits along the shelf edge; (III) layered sediments of draping and infilling character with increasing thickness towards the western Laptev Sea shelf edge and the Vilkitsky Strait; (IV) stacked debris-flow deposits. The thin drape of unit I is radiocarbon-dated to Holocene and mainly deposited during the transgression of the Laptev Sea. The wedge-shaped deposits of unit II are interpreted as river deltas, referring to point sources along the shelf edge during the Late Weichselian sea-level lowstand. This indicates that the river input across the Laptev Sea shelf was continuous during marine isotope stage (MIS) 2. The layered sediments of unit III suggest hemipelagic conditions indicative of a sea-level highstand. The pronounced thickening of unit III towards the shelf edge of the western Laptev Sea reflects the lowering of the global sea level during MIS 3. This is associated with increased riverine input due to the northward shift of the Siberian coastline. The stacked debris-flow deposits of unit IV extend continuously from the shelf edge in the Vilkitsky Strait to the continental rise of the western Laptev Sea continental margin. They indicate that large quantities of sediments were deposited directly on the upper continental slope during advances of the Kara Sea ice sheet to the shelf break. These ice-proximal conditions are presumably linked to the Middle Weichselian glaciation (MIS 4). Our evidence confirm earlier reconstructions, suggesting that in central Siberia, the Middle Weichselian glaciation (MIS 4) was of larger extent than the Late Weichselian glaciation (MIS 2).
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  • 7
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    Elsevier
    In:  Palaeogeography, Palaeoclimatology, Palaeoecology, 175 . pp. 325-341.
    Publication Date: 2020-08-07
    Description: The accurate dating of fossil coral reefs is of prime importance in determining the timing of deglaciation events and thus understanding the mechanisms driving glacial–interglacial cycles. So far, the most useful coral reef records of past sea level changes are those related to the last deglaciation and the Last Interglacial period. U/Th ages for older isotopic stages are more limited, due to the scarcity of datable material, reflecting diagenetic alteration. Most data are from emergent parts of reefs and reef terraces in active subduction zones where relative sea level records may be biased by variations in rates of tectonic uplift. New constraints on sea level changes over the past 300 000 yr are based on high-precision U-series age measurements of successive reef units on Mururoa. These have been cored in four continuous 300-m-long drill holes with seaward inclinations of 30 to 45° on the northeastern rim of the atoll. Past sea level positions have been calculated from the radiometric ages of corals by correcting the present depth of subsurface horizons both for thermal subsidence and for depositional palaeodepth. The location of this atoll at a considerable distance from former ice sheets (‘far field’) minimises the influence of glacio–isostatic rebound. Prominent units formed during four periods of relative sea level highstands, including the Holocene and stages 5 (∼125 ka), 7 (∼212 ka) and 9 (∼332 ka). These are primarily composed of coralgal frameworks that grew in very shallow water. Three periods of relative low stand correspond to stages 2 (∼17–23 ka), 4 (∼60 ka) and 8 (∼270 ka) during which small reefs developed in association with large bioclastic accumulations. Good agreement with the timing of sea level changes based on oxygen isotope measurements in deep-sea cores is noted for most of the dated reef units. We report here the first accurate coral record of the Last Glacial Maximum in the Pacific, 135–143 m below the present sea surface, suggesting that sea level may have been lower than expected during this period.
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  • 8
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    Elsevier
    In:  Deep Sea Research Part II: Topical Studies in Oceanography, 48 (14-15) . pp. 3083-3106.
    Publication Date: 2020-08-05
    Description: A synopsis of results from two sediment trap moorings deployed at the mid- and outer slope (water depths 1450 and 3660 m, respectively) of the Goban Spur (N.E. Atlantic Margin) is presented. Fluxes increase with trap deployment depth; below 1000 m resuspended and advected material contributes increasingly to bulk flux. Fluxes of dry weight, POC and diatoms in the traps 400 m above bottom (mab) are smaller than those recorded at the sediment surface due to lateral fluxes in the benthic nepheloid layer. These near-bottom fluxes are larger at shallower water depths. 231Pa/230Th ratios in sedimenting material suggest that boundary scavenging is not significant at the Goban Spur. Fluxes of 210Pb in the intermediate and deep traps are comparable to the 210Pb supply rate at this site. At the outer slope, sediment 210Pb fluxes are similar to those measured in the traps 400 mab; at the mid-slope they are a factor of 2 higher, once again indicating large near-bottom lateral particle input. Based on POC-normalised biomarkers in sedimenting material, we followed changes in the quality of sedimenting material with differing trap depth and on seasonal and event-related time scales. In spring fresh, diatom-dominated sedimentation occurs, with progressive degradation of POC with time (to winter) and depth (from 600 to 3220 m). Deeper traps are distinguished on the basis of opal and aluminium fluxes that are dominant in lateral input. A storm event during late September 1993 was clearly reflected in the δ15N isotope ratio of sedimenting material, with a time lag of 2–3 weeks. Diatom and opal fluxes were elevated in this storm-related signal, and its biomarker composition in the 600-m trap was similar to that during spring. An estimate made of upward nitrate flux (new production) at the shelf break and at the outer slope indicated a 2-fold higher new (export) production at the shelf break. Particulate organic carbon export from the shelf break to below the depth of maximal seasonal mixing ranges between 3 and 9% of primary production.
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  • 9
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    Elsevier
    In:  Deep Sea Research Part I: Oceanographic Research Papers, 48 (12). pp. 2541-2567.
    Publication Date: 2020-08-05
    Description: In September 1993 (M26) and June/July 1996 (M36), a total of 239 surface samples (7 m depth) were collected on two transects across the open Atlantic Ocean (224 samples) and northwest European shelf edge area. We present an overview of the horizontal variability of dissolved Cd, Co, Zn, and Pb in between the northwest and northeast Atlantic Ocean in relation to salinity and the nutrients. Our data show a preferential incorporation of Cd relative to P in the particulate material of the surface ocean when related to previously published parallel measurements on suspended particulate matter from the same cruise. There is a good agreement with results recently estimated from a model by Elderfield and Rickaby (Nature 405 (2000) 305), who predict for the North Atlantic Ocean a best fit for αCd/P=[Cd/P]POM/[Cd/P]SW of 2.5, whereas the approach of our transect shows a αCd/P value of 2.6. The Co concentrations of our transects varied from 〈5 to 131 pmol kg−1, with the lowest values in the subtropical gyre. There were pronounced elevations in the low-salinity ranges of the northwest Atlantic and towards the European shelf. The Co data are decoupled from the Mn distribution and support the hypothesis of marginal inputs as the dominant source. Zinc varied from a minimum of 〈0.07 nmol kg−1 to a maximum of 1.2 and 4.8 nmol kg−1 in regions influenced by Labrador shelf or European coastal waters, respectively. In subtropical and northeast Atlantic waters, the average Zn concentration was 0.16 nmol kg−1. Zinc concentrations at nearly three quarters of the stations between 40°N and 60°N were 〈0.1 nmol kg−1. This suggests that biological factors control Zn concentrations in large areas of the North Atlantic surface waters. The Pb data indicated that significant differences in concentration between the northwest and northeast Atlantic surface waters presently (1996) do not exist for this metal. The transects in 1993 and 1996 exhibited Pb concentrations in the northeast Atlantic surface waters of 30 to 40 pmol kg−1, about a fifth to a quarter of the concentrations observed in 1981. This decline is supported by our particle flux measurements in deep waters of the same region.
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  • 10
    Publication Date: 2020-08-05
    Description: As part of the OMEX I project, nutrient determinations were made on 17 cruises in the region of the Goban Spur and La Chapelle Bank between 46 and 51°N, in all seasons of the year, between 1993–1995. Over this period no change was detectable in the structure of the water masses below the deep winter mixed layer. The N : P (dissolved nitrate-to-phosphate) ratio changed from 16 at 100-m depth to less than 15 at 3300-m depth. At intermediate depths nutrient and oxygen data indicate the presence of Mediterranean Outflow water overlying Labrador Sea Water at its most eastern extension. Estimated maximum levels of production in the spring bloom are the total N-limited new primary production equivalent between 24 and 41 gC m−2, the equivalent maximum diatom production is 11 gC m−2. Measurements during the spring bloom suggest a conversion factor of 1 μM nitrate to 1 μg l−1 chlorophyll, at the shelf break, which is consistent with other recent measurements in European shelf seawaters. Sediment trap data suggest that 80% (5.4 g m−2) of the opal produced in the spring bloom dissolved before reaching the sediment trap at 600 m. A comparison of the winter and summer profiles for dissolved silicon suggests a similar dissolution of 9±3 g opal m−2 above 300-m depth. Measurements of dissolved organic carbon (DOC) in September 1994 show an enrichment of 7 μM-C above the seasonal thermocline relative to the winter values (52±4 μM). In winter dissolved organic nitrogen represents 40% of the pool of total dissolved nitrogen. There is no consistent evidence of an increase in the concentration of DON during summer. Measurements of nitrate in surface waters in January 1994 show that concentrations off-shelf vary with the temperature of the water and are related to the depth of winter mixing. Mixing in surface waters is discontinuous at the shelf break, demonstrating the degree to which exchange across the shelf break is limited even in winter. OMEX winter measurements of nitrate concentrations can be used to estimate the flow of water across the shelf break that would be required to maintain the nitrogen balance in the North Sea at a steady state. The estimate is 0.6 Sv (1 Sv=106 m3 s−1), which is similar to an earlier estimate of a total flow of 1.7 Sv based on salt budgets (cf. Huthnance, Deutsche Hydrographische Zeitschrift, 49 (1997) 153).
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