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Oelker, Julia; Achterberg, Eric Pieter; Browning, Thomas J; Liu, Haoran; Voß, Daniela; Wollschläger, Jochen; Yuan, Zhongwei (2024): Continuous optical chlorophyll-a and turbidity data along RV SONNE cruise SO289 [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.965200

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Abstract:
Underway optical chlorophyll-a and turbidity data were collected along the cruise track with Sea-Bird Scientific ECO FLNTU sensors installed within two autonomous measurement systems, called self-cleaning monitoring boxes (SMBs). The SMBs measure alternatingly. While one box is measuring, the other one is being cleaned. At the beginning of the transect, the boxes switched to operation every three hours, later, while the ship is transecting the Pacific Gyre, the cleaning interval was changed to only every 24 hours. The water inlet for the SMBs is at about 4 m depth. The data were quality controlled and the chlorophyll-a data were additionally calibrated using discrete water samples. In situ chlorophyll-a samples were collected by the scientific party from Niskin bottles during CTD stations and underway using a tow fish. Chlorophyll-a of these samples was determined in the lab on board using a bench top fluorometer. Details on all quality control steps, the calibration, as well as a comparison to satellite data can be found in the data processing report. The resulting data set contains the original data and corresponding quality flags and, in case of chlorophyll-a, additionally the calibrated data plus quality flag. The data source is given through the name of the active SMB. The data set contains data during transect and station. We recommend to use ship's speed to filter for only transect data.
Keyword(s):
chlorophyll-a; DAM; Fluorescence; ICBM; turbidity; Underway Measurement
Related to:
Achterberg, Eric Pieter; Steiner, Zvi; Galley, Christopher G (2022): South Pacific GEOTRACES, Cruise No. SO289, 18 February 2022 - 08 April 2022, Valparaiso (Chile) - Noumea (New Caledonia). SONNE-Berichte, Begutachtungspanel Forschungsschiffe, SO289, 141 pp, https://doi.org/10.48433/cr_so289
Data processing report:
Oelker, Julia (2024): CONTINUOUS OPTICAL CHLOROPHYLL-A AND TURBIDITY DATA ALONG R/V SONNE CRUISE SO289 - DATA PROCESSING REPORT. University of Oldenburg, Institute for Chemistry and Biology of the Marine Environment (ICBM), Center for Marine Sensors (ZfMars), Wilhelmshaven, Germany, DAM_DataProcessingReport_SO289.pdf
Documentation:
Arar, E J; Collins, G B (1997): Method 445.0 In Vitro Determination of Chlorophyll a and Pheophytin ain Marine and Freshwater Algae by Fluorescence. U.S. Environmental Protection Agency, Washington, DC, 1997, https://cfpub.epa.gov/si/si_public_record_report.cfm?Lab=NERL&dirEntryId=309417 (M445_0.PDF)
Project(s):
Coverage:
Median Latitude: -29.920601 * Median Longitude: -123.644366 * South-bound Latitude: -36.706190 * West-bound Longitude: 166.068930 * North-bound Latitude: -17.495770 * East-bound Longitude: -71.591300
Date/Time Start: 2022-02-17T11:51:00 * Date/Time End: 2022-04-06T00:34:00
Minimum DEPTH, water: 4.0 m * Maximum DEPTH, water: 4.0 m
Event(s):
SO289_0_Underway-7 * Latitude Start: -33.013550 * Longitude Start: -71.591480 * Latitude End: -22.268700 * Longitude End: 166.433830 * Date/Time Start: 2022-02-17T11:51:00 * Date/Time End: 2022-04-06T00:34:00 * Campaign: SO289 (GEOTRACES GP21) * Basis: Sonne_2 * Method/Device: Fluorometer, Sea-Bird Scientific, ECO FLNTU * Comment: event was not logged in DSHIP
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1DATE/TIMEDate/TimeOelker, JuliaGeocode
2LATITUDELatitudeOelker, JuliaGeocode
3LONGITUDELongitudeOelker, JuliaGeocode
4DEPTH, waterDepth watermOelker, JuliaGeocode
5Ship speedShip spknOelker, Julia
6Chlorophyll aChl aµg/lOelker, JuliaFluorometer, Sea-Bird Scientific, ECO FLNTU
7Quality flag, chlorophyll aQF chl aOelker, JuliaData quality control procedures according to Copernicus Marine in situ TAC BGC quality control group (2021)QC flag meanings: 0:no QC, 1:good, 2:probably good, 3:probably bad, 4:bad, 5-7:not used, 8:interpolated, 9:missing
8Turbidity (Nephelometric turbidity unit)TurbidityNTUOelker, JuliaFluorometer, Sea-Bird Scientific, ECO FLNTU
9Quality flag, turbidityQF turbidityOelker, JuliaData quality control procedures according to Copernicus Marine in situ TAC BGC quality control group (2021)QC flag meanings: 0:no QC, 1:good, 2:probably good, 3:probably bad, 4:bad, 5-7:not used, 8:interpolated, 9:missing
10Chlorophyll aChl aµg/lOelker, JuliaFluorometer, Sea-Bird Scientific, ECO FLNTU; Calibration with samples measured according to Arar and Collins (1997) (EPA 445)calibrated with discrete samples
11Quality flag, chlorophyll aQF chl aOelker, JuliaData quality control procedures according to Copernicus Marine in situ TAC BGC quality control group (2021)calibrated; QC flag meanings: 0:no QC, 1:good, 2:probably good, 3:probably bad, 4:bad, 5-7:not used, 8:interpolated, 9:missing
12Measurement containerMCOelker, JuliaActive container, SMB_A or SMB_B
Status:
Curation Level: Enhanced curation (CurationLevelC) * Processing Level: PANGAEA data processing level 2 (ProcLevel2)
Size:
470752 data points

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