The 2023 MDPI Annual Report has
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17 pages, 4330 KiB  
Article
Segmentation and Multi-Timepoint Tracking of 3D Cancer Organoids from Optical Coherence Tomography Images Using Deep Neural Networks
by Francesco Branciforti, Massimo Salvi, Filippo D’Agostino, Francesco Marzola, Sara Cornacchia, Maria Olimpia De Titta, Girolamo Mastronuzzi, Isotta Meloni, Miriam Moschetta, Niccolò Porciani, Fabrizio Sciscenti, Alessandro Spertini, Andrea Spilla, Ilenia Zagaria, Abigail J. Deloria, Shiyu Deng, Richard Haindl, Gergely Szakacs, Agnes Csiszar, Mengyang Liu, Wolfgang Drexler, Filippo Molinari and Kristen M. Meiburgeradd Show full author list remove Hide full author list
Diagnostics 2024, 14(12), 1217; https://doi.org/10.3390/diagnostics14121217 (registering DOI) - 8 Jun 2024
Abstract
Recent years have ushered in a transformative era in in vitro modeling with the advent of organoids, three-dimensional structures derived from stem cells or patient tumor cells. Still, fully harnessing the potential of organoids requires advanced imaging technologies and analytical tools to quantitatively [...] Read more.
Recent years have ushered in a transformative era in in vitro modeling with the advent of organoids, three-dimensional structures derived from stem cells or patient tumor cells. Still, fully harnessing the potential of organoids requires advanced imaging technologies and analytical tools to quantitatively monitor organoid growth. Optical coherence tomography (OCT) is a promising imaging modality for organoid analysis due to its high-resolution, label-free, non-destructive, and real-time 3D imaging capabilities, but accurately identifying and quantifying organoids in OCT images remain challenging due to various factors. Here, we propose an automatic deep learning-based pipeline with convolutional neural networks that synergistically includes optimized preprocessing steps, the implementation of a state-of-the-art deep learning model, and ad-hoc postprocessing methods, showcasing good generalizability and tracking capabilities over an extended period of 13 days. The proposed tracking algorithm thoroughly documents organoid evolution, utilizing reference volumes, a dual branch analysis, key attribute evaluation, and probability scoring for match identification. The proposed comprehensive approach enables the accurate tracking of organoid growth and morphological changes over time, advancing organoid analysis and serving as a solid foundation for future studies for drug screening and tumor drug sensitivity detection based on organoids. Full article
(This article belongs to the Special Issue Optical Coherence Tomography (OCT): State of the Art)
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14 pages, 2127 KiB  
Review
Application of Surface-Enhanced Raman Spectroscopy Combined with Immunoassay for the Detection of Adrenoceptor Agonists
by Yao Wang, Yubing Jing, Jinbo Cao, Yingying Sun, Kaitong Guo, Xiujin Chen, Zhaozhou Li, Qiaoqiao Shi and Xiaofei Hu
Foods 2024, 13(12), 1805; https://doi.org/10.3390/foods13121805 (registering DOI) - 8 Jun 2024
Abstract
Rapid, sensitive, and accurate detection of adrenoceptor agonists is a significant research topic in the fields of food safety and public health. Immunoassays are among the most widely used methods for detecting adrenoceptor agonists. In recent years, surface-enhanced Raman spectroscopy combined with immunoassay [...] Read more.
Rapid, sensitive, and accurate detection of adrenoceptor agonists is a significant research topic in the fields of food safety and public health. Immunoassays are among the most widely used methods for detecting adrenoceptor agonists. In recent years, surface-enhanced Raman spectroscopy combined with immunoassay (SERS-IA) has become an effective technique for improving detection sensitivity. This review focuses on the innovation of Raman reporter molecules and substrate materials for the SERS-IA of adrenoceptor agonists. In addition, it also investigates the challenges involved in potentially applying SERS-IA in the detection of adrenoceptor agonists. Overall, this review provides insight into the design and application of SERS-IA for the detection of adrenoceptor agonists, which is critical for animal-derived food safety and public health. Full article
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17 pages, 8288 KiB  
Article
Enhancing Polymer Blend Compatibility with Linear and Complex Star Copolymer Architectures: A Monte Carlo Simulation Study with the Bond Fluctuation Model
by Juan J. Freire and Costas Vlahos
Polymers 2024, 16(12), 1626; https://doi.org/10.3390/polym16121626 (registering DOI) - 8 Jun 2024
Abstract
A Monte Carlo study of the compatibilization of A/B polymer blends has been performed using the bond fluctuation model. The considered compatibilizers are copolymer molecules composed of A and B blocks. Different types of copolymer structures have been included, namely, linear diblock and [...] Read more.
A Monte Carlo study of the compatibilization of A/B polymer blends has been performed using the bond fluctuation model. The considered compatibilizers are copolymer molecules composed of A and B blocks. Different types of copolymer structures have been included, namely, linear diblock and 4-block alternating copolymers, star block copolymers, miktoarm stars, and zipper stars. Zipper stars are composed of two arms of diblock copolymers arranged in alternate order (AB and BA) from the central unit, along with two homogeneous arms of A and B units. The compatibilization performance has been characterized by analyzing the equilibration of repulsion energy, the simulated scattering intensity obtained with opposite refractive indices for A and B, the profiles along a coordinate axis, the radial distribution functions, and the compatibilizer aggregation numbers. According to the results, linear alternate block copolymers, star block copolymers, and zipper stars exhibit significantly better compatibilization, with zipper stars showing slightly but consistently better performance. Full article
(This article belongs to the Special Issue Computational Modeling and Simulations of Polymers)
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13 pages, 3080 KiB  
Article
Thermal Infrared-Image-Enhancement Algorithm Based on Multi-Scale Guided Filtering
by Huaizhou Li, Shuaijun Wang, Sen Li, Hong Wang, Shupei Wen and Fengyu Li
Fire 2024, 7(6), 192; https://doi.org/10.3390/fire7060192 (registering DOI) - 8 Jun 2024
Abstract
Obtaining thermal infrared images with prominent details, high contrast, and minimal background noise has always been a focal point of infrared technology research. To address issues such as the blurriness of details and low contrast in thermal infrared images, an enhancement algorithm for [...] Read more.
Obtaining thermal infrared images with prominent details, high contrast, and minimal background noise has always been a focal point of infrared technology research. To address issues such as the blurriness of details and low contrast in thermal infrared images, an enhancement algorithm for thermal infrared images based on multi-scale guided filtering is proposed. This algorithm fully leverages the excellent edge-preserving characteristics of guided filtering and the multi-scale nature of the edge details in thermal infrared images. It uses multi-scale guided filtering to decompose each thermal infrared image into multiple scales of detail layers and a base layer. Then, CLAHE is employed to compress the grayscale and enhance the contrast of the base layer image. Then, detail-enhancement processing of the multi-scale detail layers is performed. Finally, the base layer and the multi-scale detail layers are linearly fused to obtain an enhanced thermal infrared image. Our experimental results indicate that, compared to other methods, the proposed method can effectively enhance image contrast and enrich image details, and has higher image quality and stronger scene adaptability. Full article
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12 pages, 660 KiB  
Review
Improved Gut Health May Be a Potential Therapeutic Approach for Managing Prediabetes: A Literature Review
by Nosipho Rosebud Dimba, Nhlakanipho Mzimela and Andile Khathi
Biomedicines 2024, 12(6), 1275; https://doi.org/10.3390/biomedicines12061275 (registering DOI) - 8 Jun 2024
Abstract
Given the growing global threat and rising prevalence of type 2 diabetes mellitus (T2DM), addressing this metabolic disease is imperative. T2DM is preceded by prediabetes (PD), an intermediate hyperglycaemia that goes unnoticed for years in patients. Several studies have shown that gut microbial [...] Read more.
Given the growing global threat and rising prevalence of type 2 diabetes mellitus (T2DM), addressing this metabolic disease is imperative. T2DM is preceded by prediabetes (PD), an intermediate hyperglycaemia that goes unnoticed for years in patients. Several studies have shown that gut microbial diversity and glucose homeostasis in PD or T2DM patients are affected. Therefore, this review aims to synthesize the existing literature to elucidate the association between high-calorie diets, intestinal permeability and their correlation with PD or T2DM. Moreover, it discusses the beneficial effects of different dietary interventions on improving gut health and glucose metabolism. The primary factor contributing to complications seen in PD or T2DM patients is the chronic consumption of high-calorie diets, which alters the gut microbial composition and increases the translocation of toxic substances from the intestinal lumen into the bloodstream. This causes an increase in inflammatory response that further impairs glucose regulation. Several dietary approaches or interventions have been implemented. However, only a few are currently in use and have shown promising results in improving beneficial microbiomes and glucose metabolism. Therefore, additional well-designed studies are still necessary to thoroughly investigate whether improving gut health using other types of dietary interventions can potentially manage or reverse PD, thereby preventing the onset of T2DM. Full article
(This article belongs to the Special Issue Gut Microbiota and Regulation of Metabolism)
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26 pages, 1655 KiB  
Article
A Physiologically Based Pharmacokinetic (PBPK) Study to Assess the Adjuvanticity of Three Peptides in an Oral Vaccine
by Leonor Saldanha, Ülo Langel and Nuno Vale
Pharmaceutics 2024, 16(6), 780; https://doi.org/10.3390/pharmaceutics16060780 (registering DOI) - 8 Jun 2024
Abstract
Following up on the first PBPK model for an oral vaccine built for alpha-tocopherol, three peptides are explored in this article to verify if they could support an oral vaccine formulation as adjuvants using the same PBPK modeling approach. A literature review was [...] Read more.
Following up on the first PBPK model for an oral vaccine built for alpha-tocopherol, three peptides are explored in this article to verify if they could support an oral vaccine formulation as adjuvants using the same PBPK modeling approach. A literature review was conducted to verify what peptides have been used as adjuvants in the last decades, and it was noticed that MDP derivatives have been used, with one of them even being commercially approved and used as an adjuvant when administered intravenously in oncology. The aim of this study was to build optimized models for three MDP peptides (MDP itself, MTP-PE, and murabutide) and to verify if they could act as adjuvants for an oral vaccine. Challenges faced by peptides in an oral delivery system are taken into consideration, and improvements to the formulations to achieve better results are described in a step-wise approach to reach the most-optimized model. Once simulations are performed, results are compared to determine what would be the best peptide to support as an oral adjuvant. According to our results, MTP-PE, the currently approved and commercialized peptide, could have potential to be incorporated into an oral formulation. It would be interesting to proceed with further in vivo experiments to determine the behavior of this peptide when administered orally with a proper formulation to overcome the challenges of oral delivery systems. Full article
12 pages, 470 KiB  
Article
Galectin-13 and Laeverin Levels Interfere with Human Fetoplacental Growth
by Márió Vincze, János Sikovanyecz, Jr., Imre Földesi, Andrea Surányi, Szabolcs Várbíró, Gábor Németh, János Sikovanyecz and Zoltan Kozinszky
Int. J. Mol. Sci. 2024, 25(12), 6347; https://doi.org/10.3390/ijms25126347 (registering DOI) - 8 Jun 2024
Abstract
Galectin-13 (Gal-13) is predominantly produced by the syncytiotrophoblast, while laeverin is expressed on the outgrowing extravillous trophoblast, and both are thought to be biomarkers of preeclampsia. The aim of this study was to assess the correlation between concentrations of Gal-13 and laeverin measured [...] Read more.
Galectin-13 (Gal-13) is predominantly produced by the syncytiotrophoblast, while laeverin is expressed on the outgrowing extravillous trophoblast, and both are thought to be biomarkers of preeclampsia. The aim of this study was to assess the correlation between concentrations of Gal-13 and laeverin measured in maternal serum and amniotic fluid at 16–22 weeks of gestation and the sonographic assessment of the fetoplacental measurements. Fetal biometric data and placental volume and perfusion indices were measured in 62 singleton pregnancies. Serum and amniotic levels of Gal-13 and laeverin levels were measured using a sandwich ELISA. Both amniotic fluid and serum Gal-13 levels expressed a negative correlation to the plasma laeverin level in mid-pregnancy. Serum laeverin level correlated positively with the gestational length at delivery (β = 0.39, p < 0.05), while the amniotic laeverin level correlated well with the abdominal circumference of the fetus (β = 0.44, p < 0.05). Furthermore, laeverin level in the amnion correlated positively with the estimated fetal weight (β = 0.48, p < 0.05) and with the placental volume (β = 0.32, p < 0.05). Logistic regression analyses revealed that a higher circulating Gal-13 level represents a slightly significant risk factor (OR: 1.01) for hypertension-related diseases during pregnancy. It is a novelty that laeverin can be detected in the amniotic fluid, and amnion laeverin concentration represents a potential biomarker of fetoplacental growth. Full article
(This article belongs to the Special Issue Embryonic Development and Differentiation)
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23 pages, 8549 KiB  
Article
Employing Metal-Enriched Polymeric Composites: An Innovative Approach for Combatting Microbes and Bacteria in Building Components in Public Places
by Aaruci Agarwalla, Waleed Ahmed, Ali H. Al-Marzouqi, Tahir A. Rizvi, Essam Zaneldin and Mushtaq Khan
Buildings 2024, 14(6), 1717; https://doi.org/10.3390/buildings14061717 (registering DOI) - 8 Jun 2024
Abstract
The escalating occurrence of hospital-associated infections globally, compounded by the ongoing pandemic, has spurred researchers to delve into innovative approaches for combating pathogens and overcoming their resistance to commonly used materials. One of the most important concerns is frequently touched building components in [...] Read more.
The escalating occurrence of hospital-associated infections globally, compounded by the ongoing pandemic, has spurred researchers to delve into innovative approaches for combating pathogens and overcoming their resistance to commonly used materials. One of the most important concerns is frequently touched building components in public places and hospitals, which serve as potential sources of infection transmission, prompting a pressing need for effective antimicrobial solutions. This research developed antimicrobial polymeric composites comprising Copper (Cu), Aluminum (Al), and Stainless Steel (SS) particles incorporated into Polylactic Acid (PLA) via injection molding as a commercial method for the production of building components, to investigate the antimicrobial properties. The study aims at increasing the antimicrobial efficiency of polymeric composites with different metallic particles and tests the prepared polymeric composites (two sets of Cu-enriched composites, i.e., Cu–PLA–SS, by mixing Al–PLA with Cu–PLA, and Cu–PLA–Al, by mixing SS–PLA with Cu–PLA) against various bacteria. The results demonstrate that the samples prepared with Cu-PLA mixed with SS and Al exhibited the best antibacterial activity (98.6%) after 20 min of exposure to all bacteria, notably against Staphylococcus aureus and Enterococci. In addition, the hybrid composites Cu–PLA–SS and Cu–PLA–Al, prepared using injection molding, showed similar antimicrobial activity against all bacteria compared to those prepared using 3D printing. Therefore, polymeric composites enriched with metallic particles such as Cu, Al, and SS prepared via injection molding show potential in biomedical applications, food packaging, tissue engineering, and various technological industries, offering viable solutions for environments where risks from contact with infected surfaces are a concern. Full article
(This article belongs to the Section Building Materials, and Repair & Renovation)
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27 pages, 3934 KiB  
Article
Evidence That a Peptide-Drug/p53 Gene Complex Promotes Cognate Gene Expression and Inhibits the Viability of Glioblastoma Cells
by Ana Neves, Tânia Albuquerque, Rúben Faria, Cecília R. A. Santos, Eric Vivès, Prisca Boisguérin, Diana Carneiro, Daniel F. Bruno, Maria D. Pavlaki, Susana Loureiro, Ângela Sousa and Diana Costa
Pharmaceutics 2024, 16(6), 781; https://doi.org/10.3390/pharmaceutics16060781 (registering DOI) - 8 Jun 2024
Abstract
Glioblastoma multiform (GBM) is considered the deadliest brain cancer. Conventional therapies are followed by poor patient survival outcomes, so novel and more efficacious therapeutic strategies are imperative to tackle this scourge. Gene therapy has emerged as an exciting and innovative tool in cancer [...] Read more.
Glioblastoma multiform (GBM) is considered the deadliest brain cancer. Conventional therapies are followed by poor patient survival outcomes, so novel and more efficacious therapeutic strategies are imperative to tackle this scourge. Gene therapy has emerged as an exciting and innovative tool in cancer therapy. Its combination with chemotherapy has significantly improved therapeutic outcomes. In line with this, our team has developed temozolomide–transferrin (Tf) peptide (WRAP5)/p53 gene nanometric complexes that were revealed to be biocompatible with non-cancerous cells and in a zebrafish model and were able to efficiently target and internalize into SNB19 and U373 glioma cell lines. The transfection of these cells, mediated by the formulated peptide-drug/gene complexes, resulted in p53 expression. The combined action of the anticancer drug with p53 supplementation in cancer cells enhances cytotoxicity, which was correlated to apoptosis activation through quantification of caspase-3 activity. In addition, increased caspase-9 levels revealed that the intrinsic or mitochondrial pathway of apoptosis was implicated. This assumption was further evidenced by the presence, in glioma cells, of Bax protein overexpression—a core regulator of this apoptotic pathway. Our findings demonstrated the great potential of peptide TMZ/p53 co-delivery complexes for cellular transfection, p53 expression, and apoptosis induction, holding promising therapeutic value toward glioblastoma. Full article
(This article belongs to the Special Issue Recent Advances in Nanotechnology Therapeutics)
20 pages, 1002 KiB  
Article
High-Temperature Characteristics of Polyphosphoric Acid-Modified Asphalt and High-Temperature Performance Prediction Analysis of Its Mixtures
by Meiyan Huang, Jianguo Wei, Yuming Zhou, Ping Li, Jinming Li, Haolong Ju and Song Shi
Sustainability 2024, 16(12), 4922; https://doi.org/10.3390/su16124922 (registering DOI) - 8 Jun 2024
Abstract
To promote the application of economical and sustainable polyphosphoric acid (PPA)-modified asphalt in road engineering, styrene-butadiene block copolymer (SBS), styrene-butadiene rubber (SBR), and PPA were used to prepare PPA/SBS and PPA/SBR composite-modified asphalts, which were tested and the data analyzed. Fourier transform infrared [...] Read more.
To promote the application of economical and sustainable polyphosphoric acid (PPA)-modified asphalt in road engineering, styrene-butadiene block copolymer (SBS), styrene-butadiene rubber (SBR), and PPA were used to prepare PPA/SBS and PPA/SBR composite-modified asphalts, which were tested and the data analyzed. Fourier transform infrared spectroscopy (FTIR) tests and thermogravimetric analysis (TG) tests were carried out to study the modification mechanisms of the composite-modified asphalts, and the high-temperature performance of the PPA-modified asphalt and asphalt mixtures was analyzed by dynamic shear rheology (DSR) tests and wheel tracking tests. A gray correlation analysis and a back-propagation (BP) neural network were utilized to construct a prediction model of the high-temperature performance of the asphalt and asphalt mixtures. The test results indicate that PPA chemically interacts with the base asphalt and physically integrates with SBS and SBR. The PPA-modified asphalt has a higher decomposition temperature than the base asphalt, indicating superior thermal stability. As the PPA dosage increases, the G*/sinδ value of the PPA-modified asphalt also increases. In particular, when 0.6% PPA is combined with 2% SBS/SBR, it surpasses the high-temperature performance achieved with 4% SBS/SBR, suggesting that PPA may be a good alternative for polymer modifiers. In addition, the creep recovery of PPA-modified asphalt is influenced by the stress level, and as the stress increases, the R-value decreases, resulting in reduced elastic deformation. Furthermore, the BP neural network model achieved a fit of 0.991 in predicting dynamic stability, with a mean percentage of relative error (MAPE) of 6.15% between measured and predicted values. This underscores the feasibility of using BP neural networks in predictive dynamic stability models. Full article
(This article belongs to the Special Issue Sustainability of Pavement Engineering and Road Materials)
22 pages, 1723 KiB  
Review
Modulation of Gut Microbial Biomarkers and Metabolites in Cancer Management by Tea Compounds
by Hoi Kit Matthew Leung, Emily Kwun Kwan Lo, Fangfei Zhang, Felicianna, Marsena Jasiel Ismaiah, Congjia Chen and Hani El-Nezami
Int. J. Mol. Sci. 2024, 25(12), 6348; https://doi.org/10.3390/ijms25126348 (registering DOI) - 8 Jun 2024
Abstract
Cancers are causing millions of deaths and leaving a huge clinical and economic burden. High costs of cancer drugs are limiting their access to the growing number of cancer cases. The development of more affordable alternative therapy could reach more patients. As gut [...] Read more.
Cancers are causing millions of deaths and leaving a huge clinical and economic burden. High costs of cancer drugs are limiting their access to the growing number of cancer cases. The development of more affordable alternative therapy could reach more patients. As gut microbiota plays a significant role in the development and treatment of cancer, microbiome-targeted therapy has gained more attention in recent years. Dietary and natural compounds can modulate gut microbiota composition while providing broader and more accessible access to medicine. Tea compounds have been shown to have anti-cancer properties as well as modulate the gut microbiota and their related metabolites. However, there is no comprehensive review that focuses on the gut modulatory effects of tea compounds and their impact on reshaping the metabolic profiles, particularly in cancer models. In this review, the effects of different tea compounds on gut microbiota in cancer settings are discussed. Furthermore, the relationship between these modulated bacteria and their related metabolites, along with the mechanisms of how these changes led to cancer intervention are summarized. Full article
(This article belongs to the Special Issue Microbiota and Cancer 3.0)
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17 pages, 4110 KiB  
Article
Electrochemical Enrichment of Biocharcoal Modified on Carbon Electrodes for the Detection of Nitrite and Paraxon Ethyl Pesticide
by Anurag Adiraju, Amina Brahem, Tianqi Lu, Ammar Al-Hamry, Yu Zhou, Leixin Wei, Aditya Jalasutram, Christoph Tegenkamp, Kamel Halouani and Olfa Kanoun
J. Compos. Sci. 2024, 8(6), 217; https://doi.org/10.3390/jcs8060217 (registering DOI) - 8 Jun 2024
Abstract
Biocharcoal (BioC), a cost-effective, eco-friendly, and sustainable material can be derived from various organic sources including agricultural waste. However, to date, complex chemical treatments using harsh solvents or physical processes at elevated temperatures have been used to activate and enhance the functional groups [...] Read more.
Biocharcoal (BioC), a cost-effective, eco-friendly, and sustainable material can be derived from various organic sources including agricultural waste. However, to date, complex chemical treatments using harsh solvents or physical processes at elevated temperatures have been used to activate and enhance the functional groups of biochar. In this paper, we propose a novel easy and cost-effective activation method based on electrochemical cycling in buffer solutions to enhance the electrochemical performance of biocharcoal derived from almond shells (AS-BioC). The novel electrochemical activation method enhanced the functional groups and porosity on the surface of AS-BioC, as confirmed by microscopic, spectroscopic characterizations. Electrochemical characterization indicated an increase in the conductivity and surface area. A modified SPCE with activated AS-BioC (A.AS-BioC/SPCE), shows enhanced electrochemical performance towards oxidation and reduction of nitrite and paraxon ethyl pesticide, respectively. For both target analytes, the activated electrode demonstrates high electrocatalytic activity and achieves a very LOD of 0.38 µM for nitrite and 1.35 nM for ethyl paraxon with a broad linear range. The sensor was validated in real samples for both contaminants. Overall, the research demonstrates an innovative technique to improve the performance of AS-BioC to use as a modifier material for electrochemical sensors. Full article
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14 pages, 8251 KiB  
Article
Development of Subcutaneous SSEA3- or SSEA4-Positive Cell Capture Device
by Yasuhide Nakayama and Ryosuke Iwai
Bioengineering 2024, 11(6), 585; https://doi.org/10.3390/bioengineering11060585 (registering DOI) - 8 Jun 2024
Abstract
Securing high-quality cell sources is important in regenerative medicine. In this study, we developed a device that can accumulate autologous stem cells in the body. When small wire-assembled molds were embedded in the dorsal subcutaneous pouches of beagles for several weeks, collagen-based tissues [...] Read more.
Securing high-quality cell sources is important in regenerative medicine. In this study, we developed a device that can accumulate autologous stem cells in the body. When small wire-assembled molds were embedded in the dorsal subcutaneous pouches of beagles for several weeks, collagen-based tissues with minimal inflammation formed inside the molds. At 3 weeks of embedding, the outer areas of the tissues were composed of immature type III collagen with large amounts of cells expressing SSEA3 or SSEA4 markers, in addition to growth factors such as HGF or VEGF. When separated from the tissues by collagenase treatment, approximately four million cells with a proportion of 70% CD90-positive and 20% SSEA3- or SSEA4-positive cells were recovered from the single mold. The cells could differentiate into bone or cartilage cells. The obtained cell-containing tissues are expected to have potential as therapeutic materials or cell sources in regenerative medicine. Full article
(This article belongs to the Section Regenerative Engineering)
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16 pages, 4103 KiB  
Article
Analysis of Potential Use of Freezing Boreholes Drilled for an Underground Mine Shaft as Borehole Heat Exchangers for Heat and/or Cooling Applications
by Tomasz Sliwa, Marek Jaszczur, Jakub Drosik, Mohsen Assadi and Adib Kalantar
Energies 2024, 17(12), 2820; https://doi.org/10.3390/en17122820 (registering DOI) - 8 Jun 2024
Abstract
Borehole engineering encompasses the part of mining that involves the process of drilling boreholes and their utilization (e.g., for research, exploration, exploitation, and injection purposes). According to legal regulations, mining pits must be closed after their use, and this applies to pits in [...] Read more.
Borehole engineering encompasses the part of mining that involves the process of drilling boreholes and their utilization (e.g., for research, exploration, exploitation, and injection purposes). According to legal regulations, mining pits must be closed after their use, and this applies to pits in the form of boreholes as well. The Laboratory of Geoenergetics at AGH University of Krakow is involved in adapting old, exploited and already closed boreholes for energetic purposes. This includes geothermal applications, as well as energy storage in rock formations and boreholes. Geoenergetics is a relatively new concept that combines geothermal energy with energy storage in rock formations (including boreholes). One type of analysed borehole is a freezing borehole. They are used, for example, in drilling mining shafts that are in the vicinity of aquifers and are drilled using the rotary drilling method with a reverse circulation of drilling mud, or in peat bogs. For borehole heat exchangers based on freezing boreholes for long-term mathematical modelling, several heating scenarios were considered with several thermal loads. The maximum average power obtained after one year of usage of four boreholes with variable temperatures was 11 kW. With the usage of 10 boreholes the power reached over 27 kW. The heat-carrying temperature was assumed to be 22 °C during early summer (June and July) and 2 °C during the rest of the year. When considering stable exploitation during a 10-year period with four boreholes with the same temperatures, a heating power of over 12 kW was obtained, as well as a power of over 28 kW when considering using 10 boreholes. The maximum amount of heat obtained during the 10-year period using 10 boreholes was over 8.8 thousand GJ. Once they have fulfilled their function, these boreholes lose their technological significance. In the paper, the concept is outlined, and the results of the analysis are described using the numerical program BoHEx. Full article
(This article belongs to the Section H: Geo-Energy)
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12 pages, 1944 KiB  
Article
Development of an RP-HPLC Method for Quantifying Diclofenac Diethylamine, Methyl Salicylate, and Capsaicin in Pharmaceutical Formulation and Skin Samples
by Lubna H. M. AlNahwa, Hazim M. Ali, Tamer H. A. Hasanin, Khaled Shalaby, Mutairah S. Alshammari, Alaa M. Alsirhani and Sabrein H. Mohamed
Molecules 2024, 29(12), 2732; https://doi.org/10.3390/molecules29122732 (registering DOI) - 8 Jun 2024
Abstract
An RP-HPLC method with a UV detector was developed for the simultaneous quantification of diclofenac diethylamine, methyl salicylate, and capsaicin in a pharmaceutical formulation and rabbit skin samples. The separation was achieved using a Thermo Scientific ACCLAIMTM 120 C18 column (Waltham, [...] Read more.
An RP-HPLC method with a UV detector was developed for the simultaneous quantification of diclofenac diethylamine, methyl salicylate, and capsaicin in a pharmaceutical formulation and rabbit skin samples. The separation was achieved using a Thermo Scientific ACCLAIMTM 120 C18 column (Waltham, MA, USA, 4.6 mm × 150 mm, 5 µm). The optimized elution phase consisted of deionized water adjusted to pH = 3 using phosphoric acid mixed with acetonitrile in a 35:65% (v/v) ratio with isocratic elution. The flow rate was set at 0.7 mL/min, and the detection was performed at 205 nm and 25 °C. The method exhibits good linearity for capsaicin (0.05–70.0 µg/mL), methyl salicylate (0.05–100.0 µg/mL), and diclofenac diethylamine (0.05–100.0 µg/mL), with low LOD values (0.0249, 0.0271, and 0.0038 for capsaicin, methyl salicylate, and diclofenac diethylamine, respectively). The RSD% values were below 3.0%, indicating good precision. The overall greenness score of the method was 0.61, reflecting its environmentally friendly nature. The developed RP-HPLC method was successfully applied to analyze Omni Hot Gel® pharmaceutical formulation and rabbit skin permeation samples. Full article
(This article belongs to the Special Issue Qualitative and Quantitative Analyses of Food and Drugs)
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12 pages, 10006 KiB  
Article
Effects of Drought Stress on Abscisic Acid Content and Its Related Transcripts in Allium fistulosumA. cepa Monosomic Addition Lines
by Tetsuya Nakajima, Shigenori Yaguchi, Sho Hirata, Mostafa Abdelrahman, Tomomi Wada, Ryosuke Mega and Masayoshi Shigyo
Genes 2024, 15(6), 754; https://doi.org/10.3390/genes15060754 (registering DOI) - 8 Jun 2024
Abstract
Climate change has resulted in an increased demand for Japanese bunching onions (Allium fistulosum L., genomes FF) with drought resistance. A complete set of alien monosomic addition lines of A. fistulosum with extra chromosomes from shallot (A. cepa L. Aggregatum group, AA), [...] Read more.
Climate change has resulted in an increased demand for Japanese bunching onions (Allium fistulosum L., genomes FF) with drought resistance. A complete set of alien monosomic addition lines of A. fistulosum with extra chromosomes from shallot (A. cepa L. Aggregatum group, AA), represented as FF + 1A–FF + 8A, displays a variety of phenotypes that significantly differ from those of the recipient species. In this study, we investigated the impact of drought stress on abscisic acid (ABA) and its precursor, β-carotene, utilizing this complete set. In addition, we analyzed the expression levels of genes related to ABA biosynthesis, catabolism, and drought stress signal transduction in FF + 1A and FF + 6A, which show characteristic variations in ABA accumulation. A number of unigenes related to ABA were selected through a database using Allium TDB. Under drought conditions, FF + 1A exhibited significantly higher ABA and β-carotene content compared with FF. Additionally, the expression levels of all ABA-related genes in FF + 1A were higher than those in FF. These results indicate that the addition of chromosome 1A from shallot caused the high expression of ABA biosynthesis genes, leading to increased levels of ABA accumulation. Therefore, it is expected that the introduction of alien genes from the shallot will upwardly modify ABA content, which is directly related to stomatal closure, leading to drought stress tolerance in FF. Full article
(This article belongs to the Special Issue Abiotic Stress in Plants: Genetics and Genomics)
34 pages, 3191 KiB  
Article
Cost-Optimality Assessment of a Solar Trigeneration System for Tertiary Sector Buildings in Greece
by Dimitrios Tziritas, Konstantinos Braimakis, Dimitris Bakirtzis, George M. Stavrakakis, Sofia Yfanti, Konstantinos Terzis, Panagiotis Langouranis, Panagiotis L. Zervas and Sotirios Karellas
Energies 2024, 17(12), 2819; https://doi.org/10.3390/en17122819 (registering DOI) - 8 Jun 2024
Abstract
To pave the way towards buildings’ decarbonization in the context of the European Union’s (EU) policy, the methodology of cost-optimality assessment based on regulation 244/2012/EU is a useful tool to explore and foster the application of energy technologies in buildings. Meanwhile, the fostering [...] Read more.
To pave the way towards buildings’ decarbonization in the context of the European Union’s (EU) policy, the methodology of cost-optimality assessment based on regulation 244/2012/EU is a useful tool to explore and foster the application of energy technologies in buildings. Meanwhile, the fostering of concentrated solar power is included in the EU solar energy strategy. In this study, the cost-optimal methodology is employed for the techno-economic assessment of the integration of a novel solar, multi-purpose energy technology, namely a parabolic trough collector-based trigeneration system, in two building types with different characteristics, namely an office and a hospital, in Greece, thus allowing the evaluation of the cost-optimal system design and the impact of the building type on the system’s techno-economic performance. Reference buildings are defined and their energy demand is calculated through dynamic energy simulations. The trigeneration system’s performance for different design scenarios is then parametrically investigated using a simulation model. For each scenario, energy, environmental and economic indicators are calculated and the cost-optimal designs are extracted. In the cost-optimal implementation, the system covered 18.19–36.39% and 3.58–15.71% of the heating and cooling demand, respectively, while the reduction of the primary energy consumption and emissions was estimated at 10–14% and 10–16%, respectively. However, differences between the buildings related to the operation schedule and the loads led to the implementation of the system being economically more attractive in the hospital, while for the office, financial support is necessary for a viable investment. Full article
12 pages, 1649 KiB  
Article
Comparative Analysis of Large Language Models in Emergency Plastic Surgery Decision-Making: The Role of Physical Exam Data
by Sahar Borna, Cesar A. Gomez-Cabello, Sophia M. Pressman, Syed Ali Haider and Antonio Jorge Forte
J. Pers. Med. 2024, 14(6), 612; https://doi.org/10.3390/jpm14060612 (registering DOI) - 8 Jun 2024
Abstract
In the U.S., diagnostic errors are common across various healthcare settings due to factors like complex procedures and multiple healthcare providers, often exacerbated by inadequate initial evaluations. This study explores the role of Large Language Models (LLMs), specifically OpenAI’s ChatGPT-4 and Google Gemini, [...] Read more.
In the U.S., diagnostic errors are common across various healthcare settings due to factors like complex procedures and multiple healthcare providers, often exacerbated by inadequate initial evaluations. This study explores the role of Large Language Models (LLMs), specifically OpenAI’s ChatGPT-4 and Google Gemini, in improving emergency decision-making in plastic and reconstructive surgery by evaluating their effectiveness both with and without physical examination data. Thirty medical vignettes covering emergency conditions such as fractures and nerve injuries were used to assess the diagnostic and management responses of the models. These responses were evaluated by medical professionals against established clinical guidelines, using statistical analyses including the Wilcoxon rank-sum test. Results showed that ChatGPT-4 consistently outperformed Gemini in both diagnosis and management, irrespective of the presence of physical examination data, though no significant differences were noted within each model’s performance across different data scenarios. Conclusively, while ChatGPT-4 demonstrates superior accuracy and management capabilities, the addition of physical examination data, though enhancing response detail, did not significantly surpass traditional medical resources. This underscores the utility of AI in supporting clinical decision-making, particularly in scenarios with limited data, suggesting its role as a complement to, rather than a replacement for, comprehensive clinical evaluation and expertise. Full article
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20 pages, 5436 KiB  
Article
Phytochemical Profiling and Bioactive Potential of Grape Seed Extract in Enhancing Salinity Tolerance of Vicia faba
by Doaa E. Elsherif, Fatmah A. Safhi, Prasanta K. Subudhi, Abdelghany S. Shaban, Mai A. El-Esawy and Asmaa M. Khalifa
Plants 2024, 13(12), 1596; https://doi.org/10.3390/plants13121596 (registering DOI) - 8 Jun 2024
Abstract
Salinity stress poses a significant threat to crop productivity worldwide, necessitating effective mitigation strategies. This study investigated the phytochemical composition and potential of grape seed extract (GSE) to mitigate salinity stress effects on faba bean plants. GC–MS analysis revealed several bioactive components in [...] Read more.
Salinity stress poses a significant threat to crop productivity worldwide, necessitating effective mitigation strategies. This study investigated the phytochemical composition and potential of grape seed extract (GSE) to mitigate salinity stress effects on faba bean plants. GC–MS analysis revealed several bioactive components in GSE, predominantly fatty acids. GSE was rich in essential nutrients and possessed a high antioxidant capacity. After 14 days of germination, GSE was applied as a foliar spray at different concentrations (0, 2, 4, 6, and 8 g/L) to mitigate the negative effects of salt stress (150 mM NaCl) on faba bean plants. Foliar application of 2–8 g/L GSE significantly enhanced growth parameters such as shoot length, root length, fresh weight, and dry weight of salt-stressed bean plants compared to the control. The Fv/Fm ratio, indicating photosynthetic activity, also improved with GSE treatment under salinity stress compared to the control. GSE effectively alleviated the oxidative stress induced by salinity, reducing malondialdehyde, hydrogen peroxide, praline, and glycine betaine levels. Total soluble proteins, amino acids, and sugars were enhanced in GSE-treated, salt-stressed plants. GSE treatment under salinity stress modulated the total antioxidant capacity, antioxidant responses, and enzyme activities such as peroxidase, ascorbate peroxidase, and polyphenol oxidase compared to salt-stressed plants. Gene expression analysis revealed GSE (6 g/L) upregulated photosynthesis (chlorophyll a/b-binding protein of LHCII type 1-like (Lhcb1) and ribulose bisphosphate carboxylase large chain-like (RbcL)) and carbohydrate metabolism (cell wall invertase I (CWINV1) genes) while downregulating stress response genes (ornithine aminotransferase (OAT) and ethylene-responsive transcription factor 1 (ERF1)) in salt-stressed bean plants. The study demonstrates GSE’s usefulness in mitigating salinity stress effects on bean plants by modulating growth, physiology, and gene expression patterns, highlighting its potential as a natural approach to enhance salt tolerance. Full article
(This article belongs to the Special Issue Mechanism of Drought and Salinity Tolerance in Crops)
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22 pages, 964 KiB  
Article
Robust Energy Management Policies for Solar Microgrids via Reinforcement Learning
by Gerald Jones, Xueping Li and Yulin Sun
Energies 2024, 17(12), 2821; https://doi.org/10.3390/en17122821 (registering DOI) - 8 Jun 2024
Abstract
As the integration of renewable energy expands, effective energy system management becomes increasingly crucial. Distributed renewable generation microgrids offer green energy and resilience. Combining them with energy storage and a suitable energy management system (EMS) is essential due to the variability in renewable [...] Read more.
As the integration of renewable energy expands, effective energy system management becomes increasingly crucial. Distributed renewable generation microgrids offer green energy and resilience. Combining them with energy storage and a suitable energy management system (EMS) is essential due to the variability in renewable energy generation. Reinforcement learning (RL)-based EMSs have shown promising results in handling these complexities. However, concerns about policy robustness arise with the growing number of grid intermittent disruptions or disconnections from the main utility. This study investigates the resilience of RL-based EMSs to unforeseen grid disconnections when trained in grid-connected scenarios. Specifically, we evaluate the resilience of policies derived from advantage actor–critic (A2C) and proximal policy optimization (PPO) networks trained in both grid-connected and uncertain grid-connectivity scenarios. Stochastic models, incorporating solar energy and load uncertainties and utilizing real-world data, are employed in the simulation. Our findings indicate that grid-trained PPO and A2C excel in cost coverage, with PPO performing better. However, in isolated or uncertain connectivity scenarios, the demand coverage performance hierarchy shifts. The disruption-trained A2C model achieves the best demand coverage when islanded, whereas the grid-connected A2C network performs best in an uncertain grid connectivity scenario. This study enhances the understanding of the resilience of RL-based solutions using varied training methods and provides an analysis of the EMS policies generated. Full article
14 pages, 4084 KiB  
Article
Regional Hydro-Chemistry of Hydrothermal Springs in Northeastern Algeria, Case of Guelma, Souk Ahras, Tebessa and Khenchela Regions
by Ibtissem Djaafri, Karima Seghir, Vincent Valles and Laurent Barbiero
Earth 2024, 5(2), 214-227; https://doi.org/10.3390/earth5020011 (registering DOI) - 8 Jun 2024
Abstract
Hydrothermal units are characterized by the emergence of several large-flow thermo-mineral springs (griffons), each with varying temperature and physico-chemical characteristics depending on the point of emergence. It seems, however, that there is variability between the different systems, although it is not easy to [...] Read more.
Hydrothermal units are characterized by the emergence of several large-flow thermo-mineral springs (griffons), each with varying temperature and physico-chemical characteristics depending on the point of emergence. It seems, however, that there is variability between the different systems, although it is not easy to characterize it because the variability within each system is high. The regional dimension of the chemical composition of thermal waters is, therefore, an aspect that has received very little attention in the literature due to the lack of access to the deep reservoir. In this study, we investigated the spatial variability, on a regional scale, in the characteristics of thermal waters in northeastern Algeria, and more specifically the hydrothermal systems of Guelma, Souk Ahras, Khenchela and Tébessa. Thirty-two hot water samples were taken between December 2018 and October 2019, including five samples of low-temperature mineral spring water. Standard physico-chemical parameters, major anions and cations and lithium were analyzed. The data were log-transformed data and processed via principal component analysis, discriminant analysis and unsupervised classification. The results show that thermal waters are the result of a mixture of hot waters, whose chemical profile has a certain local character, and contaminated by cold surface waters. These surface waters may also have several chemical profiles depending on the location. In addition to the internal variability in each resource, there are differences in water quality between these different hydrothermal systems. The Guelma region differs the most from the other thermal regions studied, with a specific calcic sulfate chemical profile. This question is essential for the rational development of these regional resources in any field whatsoever. Full article
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16 pages, 3044 KiB  
Article
Newly Woody Artificial Diet Reveals Antibacterial Activity of Hemolymph in Larvae of Zophobas atratus (Fabricius, 1775) (Coleoptera: Tenebrionidae)
by Alexander Kuprin, Vladislava Baklanova, Maria Khandy, Andrei Grinchenko and Vadim Kumeiko
Insects 2024, 15(6), 435; https://doi.org/10.3390/insects15060435 (registering DOI) - 8 Jun 2024
Abstract
The rearing of saproxylic insects in laboratory conditions is an important task for studying the biology of insects. Through understanding nutritional needs, it is possible to optimize beetle rearing in laboratory conditions. In this study, an artificial fungi-based diet (FD) was developed for [...] Read more.
The rearing of saproxylic insects in laboratory conditions is an important task for studying the biology of insects. Through understanding nutritional needs, it is possible to optimize beetle rearing in laboratory conditions. In this study, an artificial fungi-based diet (FD) was developed for the cultivation of the darkling beetle Zophobas atratus (Fabricius, 1775) (Coleoptera: Tenebrionidae) in laboratory conditions as a model object for studying the biology of saproxylophagous beetles. To assess the influence of the diet, a number of physiological parameters were measured, including development time, body size, and weight of all stages of the beetle’s life cycle, as well as its immune status. The immune status of Z. atratus was assessed on the basis of larval hemolymph antibacterial activity against six different bacterial strains assessed using disk-diffusion and photometric tests. Our findings show that the FD reduces development time and boosts the immune status as compared to beetles reared on a standard diet (SD). Samples from FD-reared larvae had pronounced antibacterial activity as compared to samples from SD-reared larvae. This work is of fundamental importance for understanding the correlations between nutrition and development of saproxylic Coleoptera and is the first report on immune status regulation in this group of insects. Full article
(This article belongs to the Special Issue Insect Rearing: Reserve Forces with Commercial and Ecological Values)
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24 pages, 6241 KiB  
Article
Discovery and Characterization of the ddx41 Gene in Atlantic Salmon: Evolutionary Implications, Structural Functions, and Innate Immune Responses to Piscirickettsia salmonis and Renibacterium salmoninarum Infections
by Alejandro J. Yañez, Claudia A. Barrientos, Adolfo Isla, Marcelo Aguilar, Sandra N. Flores-Martin, Yassef Yuivar, Adriana Ojeda, Pablo Ibieta, Mauricio Hernández, Jaime Figueroa, Rubén Avendaño-Herrera and Marcos Mancilla
Int. J. Mol. Sci. 2024, 25(12), 6346; https://doi.org/10.3390/ijms25126346 (registering DOI) - 8 Jun 2024
Abstract
The innate immune response in Salmo salar, mediated by pattern recognition receptors (PRRs), is crucial for defending against pathogens. This study examined DDX41 protein functions as a cytosolic/nuclear sensor for cyclic dinucleotides, RNA, and DNA from invasive intracellular bacteria. The investigation determined [...] Read more.
The innate immune response in Salmo salar, mediated by pattern recognition receptors (PRRs), is crucial for defending against pathogens. This study examined DDX41 protein functions as a cytosolic/nuclear sensor for cyclic dinucleotides, RNA, and DNA from invasive intracellular bacteria. The investigation determined the existence, conservation, and functional expression of the ddx41 gene in S. salar. In silico predictions and experimental validations identified a single ddx41 gene on chromosome 5 in S. salar, showing 83.92% homology with its human counterpart. Transcriptomic analysis in salmon head kidney confirmed gene transcriptional integrity. Proteomic identification through mass spectrometry characterized three unique peptides with 99.99% statistical confidence. Phylogenetic analysis demonstrated significant evolutionary conservation across species. Functional gene expression analysis in SHK-1 cells infected by Piscirickettsia salmonis and Renibacterium salmoninarum indicated significant upregulation of DDX41, correlated with increased proinflammatory cytokine levels and activation of irf3 and interferon signaling pathways. In vivo studies corroborated DDX41 activation in immune responses, particularly when S. salar was challenged with P. salmonis, underscoring its potential in enhancing disease resistance. This is the first study to identify the DDX41 pathway as a key component in S. salar innate immune response to invading pathogens, establishing a basis for future research in salmonid disease resistance. Full article
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