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Phelps, Leanne N; Chevalier, Manuel; Shanahan, Timothy M; Aleman, Julie C; Courtney-Mustaphi, Colin J; Kiahtipes, Christopher Albert; Broennimann, Oliver; Marchant, Robert; Shekeine, John; Quick, Lynne J; Davis, Basil A S; Metwally, Amr A; Bamford, Marion; Neuman, Frank H; Scott, Louis; Cordova, Carlos; Burrough, Sallie L; Manning, Katie; Guisan, Antoine (2019): Pollen dataset for "Asymmetric response of forest and grassy biomes to climate variability across the African Humid Period: influenced by anthropogenic disturbance?" [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.905309

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Abstract:
This dataset is associated with Phelps et al. (2020, DOI: 10.1111/ecog.04990), and is comprised of paleoecological information from African subfossil pollen assemblages over the past 20,000 years. Data includes the following information:
Appendix 1: a list of collated sites from the APD, EPD, and other publications
Appendix 2: a list of collated entities from the APD, EPD, and other publications
Appendix 3: a list of citations for each entity in appendix 2, whether analyzed or not
Appendix 4: a harmonized taxa list with original taxa names and numbers
Appendix 5: a list of collated samples from the APD, EPD, and other publications
Appendix 6: a list of counts from the APD, EPD, ACER, and other publications
Appendix 7: a list of dates (14C, etc) from the APD, EPD, ACER, and other publications
Appendix 8: a list of CLAM outputs calculated (Blaauw 2010) from the list of radiocarbon dates
Appendix 9: a harmonized biomization scheme for "direct" and "indirect" methods
For use of these datasets, associated publications (see appendix 3) and databases should be cited:
The African Pollen Database (APD: Vincens et al. 2007, http://fpd.sedoo.fr/fpd/bibli.do)
The European Pollen Database (EPD: Fyfe et al. 2009, http://www.europeanpollendatabase.net/getdata/)
The ACER Pollen and Charcoal Database (Sánchez Goñi et al. 2017)
Additional information was added to these appendices in association with the following publications (note: information was extracted from publications and/or contributed by authors): Brenac 1988, Burrough & Willis 2015, Chase et al. 2015b, Cheddadi et al. 2015, 2016, 2017, Cordova et al. 2017, Giresse et al. 1994, Lim et al. 2016, Maley 1991, Maley & Brenac 1998, Metwally et al. 2014, Quick et al. 2016, 2018, Valsecchi et al. 2013, Waller et al. 2007. The harmonized biomization scheme (appendix 9), is based on six primary publications: Jolly et al. 1998, Elenga et al. 2000, Vincens et al. 2006, Vincens et al. 2007, Lebamba et al. 2009, Lézine et al. 2009, with reference to the African Plant Database (version 3.4.0).
Keyword(s):
African Humid Period; biomization scheme; disturbance dynamics; ecosystem response to climate change; land use and land cover change; palynology; PFT; reconstructing vegetation change; subfossil pollen records; vegetation-environment interactions
Supplement to:
Phelps, Leanne N; Chevalier, Manuel; Shanahan, Timothy M; Aleman, Julie C; Courtney-Mustaphi, Colin J; Kiahtipes, Christopher Albert; Broennimann, Oliver; Marchant, Robert; Shekeine, John; Quick, Lynne J; Davis, Basil A S; Guisan, Antoine; Manning, Katie (2020): Asymmetric response of forest and grassy biomes to climate variability across the African Humid Period: influenced by anthropogenic disturbance? Ecography, 43(early view), 1-26, https://doi.org/10.1111/ecog.04990
Related to:
Brenac, Patrice (1988): Evolution de la végétation et du climat dans l'Ouest Cameroun entre 25000 et 11000 ans BP. Actes Xe Symposium de l'Association des Palynologues de Langue Francaise, Trav. Sect. Sci. et Tech. Inst. Francais Pondichéry, 25, 91-103
Burrough, Sallie L; Willis, Katherine J (2015): Ecosystem resilience to late-Holocene climate change in the Upper Zambezi Valley. The Holocene, 25(11), 1811-1828, https://doi.org/10.1177/0959683615591355
Chase, Brian M; Lim, Sophak; Chevalier, Manuel; Boom, Arnoud; Carr, Andrew S; Meadows, Michael E; Reimer, Paula J (2015): Influence of tropical easterlies in southern Africa's winter rainfall zone during the Holocene. Quaternary Science Reviews, 107, 138-148, https://doi.org/10.1016/j.quascirev.2014.10.011
Chateauneuf, Jean-Jacques; Faure, H; Lézine, Anne-Marie (1986): Facteurs contrôlant la genèse et la destruction des tourbes tropicales du littoral ouest africain. Document du Bureau de Recherches Géologiques et Minières, 110, 77-91
Cheddadi, Rachid; Bouaissa, Ouafaa; Rhoujjati, Ali; Dezileau, Laurent (2016): Environmental changes in the moroccan western rif mountains over the last 9,000 years. Quaternaire, 27/1, 15-25, https://doi.org/10.4000/quaternaire.7517
Cheddadi, Rachid; Henrot, Alexandra-Jane; François, Louis M; Boyer, Frédéric; Bush, Mark B; Carré, Matthieu; Coissac, Éric; de Oliveira, Paulo Eduardo; Ficetola, Francesco; Hambuckers, Alain; Huang, Kangyou; Lézine, Anne-Marie; Nourelbait, Majda; Rhoujjati, Ali; Taberlet, Pierre; Sarmiento, Fausto; Abel-Schaad, Daniel; Alba-Sánchez, Francisca; Zheng, Zhuo (2017): Microrefugia, Climate Change, and Conservation of Cedrus atlantica in the Rif Mountains, Morocco. Frontiers in Ecology and Evolution, 5, https://doi.org/10.3389/fevo.2017.00114
Cheddadi, Rachid; Nourelbait, Majda; Bouaissa, Ouafaa; Tabel, Jalal; Rhoujjati, Ali; López-Sáez, José Antonio; Alba-Sánchez, Francisca; Khater, Carla; Ballouche, Aziz; Dezileau, Laurent; Lamb, Henry (2015): A History of Human Impact on Moroccan Mountain Landscapes. African Archaeological Review, 32(2), 233-248, https://doi.org/10.1007/s10437-015-9186-7
Cordova, Carlos; Scott, Louis; Chase, Brian M; Chevalier, Manuel (2017): Late Pleistocene-Holocene vegetation and climate change in the Middle Kalahari, Lake Ngami, Botswana. Quaternary Science Reviews, 171, 199-215, https://doi.org/10.1016/j.quascirev.2017.06.036
Elenga, Hilaire; Peyron, Odile; Bonnefille, Raymonde; Jolly, Dominique; Cheddadi, Rachid; Guiot, Joel; Andrieu, Valérie; Bottema, Sytze; Buchet, Guillaume; de Beaulieu, Jacques-Louis; Hamilton, A C; Maley, Jean; Marchant, Robert; Pérez-Obiol, Ramon P; Reille, Maurice; Riollet, Guy; Scott, L; Straka, Herbert; Taylor, Dustin; van Campo, Elise; Vincens, Annie; Laarif, Fouzia; Jonson, H (2000): Pollen-based biome reconstruction for southern Europe and Africa 18,000 yr BP. Journal of Biogeography, 27(3), 621-634, https://doi.org/10.1046/j.1365-2699.2000.00430.x
Giresse, Pierre; Maley, Jean; Brenac, Patrice (1994): Late Quaternary palaeoenvironments in the Lake Barombi Mbo (West Cameroon) deduced from pollen and carbon isotopes of organic matter. Palaeogeography, Palaeoclimatology, Palaeoecology, 107(1-2), 65-78, https://doi.org/10.1016/0031-0182(94)90165-1
Jolly, Dominique; Prentice, I Colin; Bonnefille, Raymonde; Ballouche, Aziz; Bengo, Martin; Brenac, Patrice; Buchet, Guillaume; Burney, David; Cazet, Jean-Pierre; Cheddadi, Rachid; Edorh, Therese; Elenga, Hilaire; Elmoutaki, Saida; Guiot, Joel; Laarif, Fouzia; Lamb, Henry; Lézine, Anne-Marie; Maley, Jean; Mbenza, Muaka; Peyron, Odile; Reille, Maurice; Reynaud-Farrera, Isabelle; Riollet, Guy; Ritchie, Jim C; Roche, E; Scott, Louis; Ssemmanda, Immaculate; Straka, Herbert; Umer, Mohammed; van Campo, Elise; Vilimumbalo, Sikiminywa; Vincens, Annie; Waller, Martyn (1998): Biome reconstruction from pollen and plant macrofossil data for Africa and the Arabian peninsula at 0 and 6000 years. Journal of Biogeography, 25(6), 1007-1027, https://doi.org/10.1046/j.1365-2699.1998.00238.x
Lebamba, Judicael; Ngomanda, A; Vincens, Annie; Jolly, Dominique; Favier, C; Elenga, Hilaire; Bentaleb, Ilhem (2009): Central African biomes and forest succession stages derived from modern pollen data and plant functional types. Climate of the Past, 5(3), 403-429, https://doi.org/10.5194/cp-5-403-2009
Lézine, Anne-Marie; Watrin, Julie; Vincens, Annie; Hély, Christelle (2009): Are modern pollen data representative of west African vegetation? Review of Palaeobotany and Palynology, 156(3-4), 265-276, https://doi.org/10.1016/j.revpalbo.2009.02.001
Lim, Sophak; Chase, Brian M; Chevalier, Manuel; Reimer, Paula J (2016): 50,000 years of vegetation and climate change in the southern Namib Desert, Pella, South Africa. Palaeogeography, Palaeoclimatology, Palaeoecology, 451, 197-209, https://doi.org/10.1016/j.palaeo.2016.03.001
Maley, Jean (1991): The African rain forest vegetation and palaeoenvironments during late quaternary. Climatic Change, 19(1-2), 79-98, https://doi.org/10.1007/BF00142216
Maley, Jean; Brenac, Patrice (1998): Vegetation dynamics, palaeoenvironments and climatic changes in the forests of western Cameroon during the last 28,000 years B.P. Review of Palaeobotany and Palynology, 99(2), 157-187, https://doi.org/10.1016/S0034-6667(97)00047-X
Metwally, Amr A; Scott, L; Neumann, Frank Harald; Bamford, Marion; Oberhänsli, Hedi (2014): Holocene palynology and palaeoenvironments in the Savanna Biome at Tswaing Crater, central South Africa. Palaeogeography, Palaeoclimatology, Palaeoecology, 402, 125-135, https://doi.org/10.1016/j.palaeo.2014.03.019
Quick, Lynne J; Chase, Brian M; Wündsch, Michael; Kirsten, Kelly L; Chevalier, Manuel; Mäusbacher, Roland; Meadows, Michael E; Haberzettl, Torsten (2018): A high-resolution record of Holocene climate and vegetation dynamics from the southern Cape coast of South Africa: pollen and microcharcoal evidence from Eilandvlei. Journal of Quaternary Science, 33(5), 487-500, https://doi.org/10.1002/jqs.3028
Quick, Lynne J; Meadows, Michael E; Bateman, Mark; Kirsten, Kelly L; Mäusbacher, Roland; Haberzettl, Torsten; Chase, Brian M (2016): Vegetation and climate dynamics during the last glacial period in the fynbos-afrotemperate forest ecotone, southern Cape, South Africa. Quaternary International, 404, 136-149, https://doi.org/10.1016/j.quaint.2015.08.027
Sanchez Goñi, Maria Fernanda; Desprat, Stéphanie; Daniau, Anne-Laure; Bassinot, Franck C; Polanco-Martínez, Josué M; Harrison, Sandy P; Allen, Judy R M; Anderson, R Scott; Behling, Hermann; Bonnefille, Raymonde; Burjachs, Francesc; Carrión, José S; Cheddadi, Rachid; Clark, James S; Combourieu-Nebout, Nathalie; Courtney-Mustaphi, Colin J; DeBusk, Georg H; Dupont, Lydie M; Finch, Jemma M; Fletcher, William J; Giardini, Marco; González, Catalina; Gosling, William D; Grigg, Laurie D; Grimm, Eric C; Hayashi, Ryoma; Helmens, Karin F; Heusser, Linda E; Hill, Trevor R; Hope, Geoffrey; Huntley, Brian; Igarashi, Yaeko; Irino, Tomohisa; Jacobs, Bonnie Fine; Jiménez-Moreno, Gonzalo; Kawai, Sayuri; Kershaw, A Peter; Kumon, Fujio; Lawson, Ian T; Ledru, Marie-Pierre; Lézine, Anne-Marie; Liew, Ping-Mei; Magri, Donatella; Marchant, Robert; Margari, Vasiliki; Mayle, Francis E; McKenzie, G Merna; Moss, Patrick T; Müller, Stefanie; Müller, Ulrich C; Naughton, Filipa; Newnham, Rewi M; Oba, Tadamichi; Pérez-Obiol, Ramon P; Pini, Roberta; Ravazzi, Cesare; Roucoux, Katherine H; Rucina, Stephen M; Scott, Louis; Takahara, Hikaru; Tzedakis, Polychronis C; Urrego, Dunia H; van Geel, Bas; Valencia, Bryan G; Vandergoes, Marcus J; Vincens, Annie; Whitlock, Cathy L; Willard, Debra A; Yamamoto, Masanobu (2017): The ACER pollen and charcoal database: a global resource to document vegetation and fire response to abrupt climate changes during the last glacial period. Earth System Science Data, 9(2), 679-695, https://doi.org/10.5194/essd-9-679-2017
Valsecchi, Verushka; Chase, Brian M; Slingsby, Jasper A; Carr, Andrew S; Quick, Lynne J; Meadows, Michael E; Cheddadi, Rachid; Reimer, Paula J (2013): A high resolution 15,600-year pollen and microcharcoal record from the Cederberg Mountains, South Africa. Palaeogeography, Palaeoclimatology, Palaeoecology, 387, 6-16, https://doi.org/10.1016/j.palaeo.2013.07.009
Vincens, Annie; Bremond, Laurent; Brewer, Simon; Buchet, Guillaume; Dussouillez, Philippe (2006): Modern pollen-based biome reconstructions in East Africa expanded to southern Tanzania. Review of Palaeobotany and Palynology, 140(3-4), 187-212, https://doi.org/10.1016/j.revpalbo.2006.04.003
Vincens, Annie; Garcin, Yannick; Buchet, Guillaume (2007): Influence of rainfall seasonality on African lowland vegetation during the Late Quaternary: pollen evidence from Lake Masoko, Tanzania. Journal of Biogeography, 34(7), 1274-1288, https://doi.org/10.1111/j.1365-2699.2007.01698.x
Waller, Martyn P; Street-Perrott, F Alayne; Wang, Hongya (2007): Holocene vegetation history of the Sahel: pollen, sedimentological and geochemical data from Jikariya Lake, north-eastern Nigeria. Journal of Biogeography, 34(9), 1575-1590, https://doi.org/10.1111/j.1365-2699.2007.01721.x
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