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  • 1
    Publication Date: 2024-03-15
    Description: Ocean acidification, resulting from increasing atmospheric carbon dioxide (CO2) emissions, can affect the physiological performance of some fishes. Most studies investigating ocean acidification have used stable pCO2 treatments based on open ocean predictions. However, nearshore systems can experience substantial spatial and temporal variations in pCO2. Notably, coral reefs are known to experience diel fluctuations in pCO2, which are expected to increase on average and in magnitude in the future. Though we know these variations exist, relatively few studies have included fluctuating treatments when examining the effects of ocean acidification conditions on coral reef species. To address this, we exposed two species of damselfishes, Amblyglyphidodon curacao and Acanthochromis polyacanthus, to ambient pCO2, a stable elevated pCO2 treatment, and two fluctuating pCO2 treatments (increasing and decreasing) over an 8 h period. Oxygen uptake rates were measured both while fish were swimming and resting at low-speed. These 8 h periods were followed by an exhaustive swimming test (Ucrit) and blood draw examining swimming metrics and haematological parameters contributing to oxygen transport. When A. polyacanthus were exposed to stable pCO2 conditions (ambient or elevated), they required more energy during the 8 h trial regardless of swimming type than fish exposed to either of the fluctuating pCO2 treatments (increasing or decreasing). These results were reflected in the oxygen uptake rates during the Ucrit tests, where fish exposed to fluctuating pCO2 treatments had a higher factorial aerobic scope than fish exposed to stable pCO2 treatments. By contrast, A. curacao showed no effect of pCO2 treatment on swimming or oxygen uptake metrics. Our results show that responses to stable versus fluctuating pCO2 differ between species – what is stressful for one species many not be stressful for another. Such asymmetries may have population- and community-level impacts under higher more variable pCO2 conditions in the future.
    Keywords: Acanthochromis polyacanthus; Aerobic scope of oxygen; Alkalinity, total; Alkalinity, total, standard error; Amblyglyphidodon curacao; Animalia; Aragonite saturation state; Bicarbonate ion; Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Chordata; Coast and continental shelf; Comment; Containers and aquaria (20-1000 L or 〈 1 m**2); Factorial aerobic scope; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Glucose; Growth/Morphology; Haematocrit; Haemoglobin; Height; Identification; Laboratory experiment; Lactate; Length, standard; Mass; Mean corpuscular haemoglobin concentration; Nekton; OA-ICC; Ocean Acidification International Coordination Centre; Other; Other studied parameter or process; Oxygen uptake rate; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard error; Pelagos; pH; pH, standard error; Potentiometric titration; Range; Registration number of species; Respiration; Salinity; Salinity, standard error; Single species; Slope; South Pacific; Species; Spectrophotometric; Speed, swimming, critical; Temperature, water; Temperature, water, standard error; Treatment; Tropical; Type; Uniform resource locator/link to reference; Width
    Type: Dataset
    Format: text/tab-separated-values, 99314 data points
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  • 2
    ISSN: 1520-510X
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 3
    ISSN: 1520-5835
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology , Physics
    Type of Medium: Electronic Resource
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  • 4
    Electronic Resource
    Electronic Resource
    s.l. : American Chemical Society
    Journal of the American Chemical Society 90 (1968), S. 4758-4759 
    ISSN: 1520-5126
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 5
    Electronic Resource
    Electronic Resource
    s.l. : American Chemical Society
    Journal of the American Chemical Society 85 (1963), S. 307-308 
    ISSN: 1520-5126
    Source: ACS Legacy Archives
    Topics: Chemistry and Pharmacology
    Type of Medium: Electronic Resource
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  • 6
    Electronic Resource
    Electronic Resource
    Springer
    Journal of molecular evolution 39 (1994), S. 496-505 
    ISSN: 1432-1432
    Keywords: Caulimovirus ; Pararetroviruses ; Recombination ; Reverse transcription ; Viral isolates
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract Isolates of cauliflower mosaic virus (CaMV) differ in host range and symptomatology. Knowledge of their sequence relationships should assist in identifying nucleotide sequences responsible for isolate-specific characters. Complete nucleotide sequences of the DNAs of eight isolates of CaMV were aligned and the aligned sequences were used to analyze phylogenetic relationships by maximum likelihood, bootstrapped parsimony, and distance methods. Isolates found in North America clustered separately from those isolated from other parts of the world. Additional isolates, for which partial sequences were available, were incorporated into phylogenetic analysis of the sequences of genome segments corresponding to individual protein coding regions or the large intergenic region of CaMV DNA. The analysis revealed several instances where the position of an isolate on a tree for one coding region did not agree with the position of the isolate on the tree for the complete genome or with its position on trees for other coding regions. Examination of the distribution of shared residue types of phylogenetically informative positions in anomalous regions suggested that most of the anomalies were due to recombination events during the evolution of the isolates. Application of an algorithm that searches for segments of significant length that are identical between pairs of isolates or contain a significantly high concentration of polymorphisms suggested two additional recombination events between progenitors of the isolates studied and an event between the XinJing isolate and a CaMV not represented in the data set. An earlier phylogenetic origin for CaMV than for carnation etched ring virus, the caulimovirus used as outgroup in these analyses, was deduced from the position of the outgroup with North American isolates in some trees, but with non-North American isolates in other trees.
    Type of Medium: Electronic Resource
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  • 7
    ISSN: 1432-1211
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Type of Medium: Electronic Resource
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  • 8
    ISSN: 1432-1211
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology , Medicine
    Notes: Abstract We investigated T-cell-defined HLA-B7 subtypes using cDNA sequencing, analysis of bound peptides, and reactivity with a panel of alloreactive cytotoxic T-lymphocyte (CTL) clones. Three subtypes (HLA-B*0702, HLA-B*0703, and HLA-B*0705) differ in nucleotide and predicted amino acid sequence. CTL reactivity and pooled peptide sequencing show that these three HLA-B7 subtypes bind distinct but overlapping sets of peptides. In particular B*0702 expresses D pocket residue Asp 114 and binds peptides with P3 Arg, whereas B*0705 expresses D pocket residue Asn 114 and binds peptides with P3 Ala, Leu, and Met. Consistent with different peptide-binding specificities, three alloreactive CTL differentiate between cells expressing B*0702, B*0703, and B*0705 by detecting specific peptide/HLA-B7 complexes. In contrast, three other T-cell-defined HLA-B7 subtypes are identical to HLA-B*0702. The B*0702-expressing cell lines are differentiated by two of ten CTL clones. One CTL clone differentiates B*0702-expressing cells by their ability to present peptide antigen. Thus differences in peptide presentation can explain differential CTL recognition of cell lines expressing structurally identical and variant HLA-B7.
    Type of Medium: Electronic Resource
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  • 9
    ISSN: 1432-072X
    Keywords: Photosynthetic bacteria (Rhodobacter capsulatus) ; Transposon mutagenesis ; TMAO reduction ; DMSO reduction ; Anaerobic respiration ; Electron transport
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract 1) Rhodobacter capsulatus (formerly Rhodopseudomonas capsulata) strain 37b4 was subjected to transposon Tn5 mutagenesis. 2) Kanamycin-resistant transconjugants were screened for their inability to reduce trimethylamine-N-oxide (TMAO) as judged by the lack of alkali production during anaerobic growth on plates containing glucose as carbon source and cresol red as pH indicator. 3) Of 6 mutants examined, all were found to have considerably decreased levels of methylviologen-dependent TMAO reductase activity and dimethylsulphoxide (DMSO) reductase activity. 4) Periplasmic fractions of one of these mutants (DK9) and of the parent strain were subjected to sodium dodecylsulphate polyacrylamide gel electrophoresis. The gels were stained for TMAO-reductase and DMSO-reductase. With the wild-type strain, only a single polypeptide band, Mr=46,000, stained for TMAO and DMSO reductase activity. In mutant DK9 this band was not detectable. 5) In contrast to the parent strain, harvested washed cells of mutant DK9 were unable to generate a cytoplasmic membrane potential in the presence of TMAO or DMSO under dark anaerobic conditions. 6) In contrast to the parent strain, DK9 was unable to grow in dark anaerobic culture with fructose as the carbon source and TMAO as oxidant.
    Type of Medium: Electronic Resource
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  • 10
    ISSN: 1432-072X
    Keywords: Rhodobacter capsulatus ; Nitrate reduction ; Auxiliary electron transport ; Myxothiazol ; 2-n-heptyl-4-hydroxyquinoline-N-oxide ; Ubiquinone pool
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract The effects of various electron transport inhibitors upon the rates of reduction NO 3 - , dimethyl sulphoxide (DMSO) and N2O in anaerobic suspensions of Rhodobacter capsulatus have been studied. A new method for the determination of the rates of reduction of these auxiliary oxidants in intact cells is presented, based on the proportionality observed between the concentration of oxidant and the duration of the electrochromic carotenoid bandshift. For NO 3 - and N2O good agreement was found between rates of reduction determined using electrodes and those determined by the electrochromic method. Myxothiazol and antimycin A had no effect on the rates of reduction of NO 3 - and DMSO suggesting that the cytochrome b/c 1complex is not involved in electron transport to these oxidants. 2-n-heptyl-4-hydroxyquinoline-N-oxide (HOQNO) inhibited at two sites, one within the cytochrome b/c 1complex and the other on the nitrate reducing pathay, but had no effect on electron transport to N2O or DMSO. In both intact cells and cell free extracts, HOQNO had no effect on the nitrate dependent re-oxidation of reduced methylviologen (MVH2), a direct electron donor to nitrate reductase. Our data are consistent with a branch point for the auxiliary electron transport pathways at the level of the ubiquinone pool.
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