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  • 1
    ISSN: 1365-2486
    Source: Blackwell Publishing Journal Backfiles 1879-2005
    Topics: Biology , Energy, Environment Protection, Nuclear Power Engineering , Geography
    Notes: Reliable models are required to assess the impacts of climate change on forest ecosystems. Precise and independent data are essential to assess this accuracy. The flux measurements collected by the EUROFLUX project over a wide range of forest types and climatic regions in Europe allow a critical testing of the process-based models which were developed in the LTEEF project. The ECOCRAFT project complements this with a wealth of independent plant physiological measurements. Thus, it was aimed in this study to test six process-based forest growth models against the flux measurements of six European forest types, taking advantage of a large database with plant physiological parameters.The reliability of both the flux data and parameter values itself was not under discussion in this study. The data provided by the researchers of the EUROFLUX sites, possibly with local corrections, were used with a minor gap-filling procedure to avoid the loss of many days with observations.The model performance is discussed based on their accuracy, generality and realism. Accuracy was evaluated based on the goodness-of-fit with observed values of daily net ecosystem exchange, gross primary production and ecosystem respiration (gC m−2 d−1), and transpiration (kg H2O m−2 d−1). Moreover, accuracy was also evaluated based on systematic and unsystematic errors. Generality was characterized by the applicability of the models to different European forest ecosystems. Reality was evaluated by comparing the modelled and observed responses of gross primary production, ecosystem respiration to radiation and temperature. The results indicated that: Accuracy. All models showed similar high correlation with the measured carbon flux data, and also low systematic and unsystematic prediction errors at one or more sites of flux measurements. The results were similar in the case of several models when the water fluxes were considered. Most models fulfilled the criteria of sufficient accuracy for the ability to predict the carbon and water exchange between forests and the atmosphere. Generality. Three models of six could be applied for both deciduous and coniferous forests. Furthermore, four models were applied both for boreal and temperate conditions. However, no severe water-limited conditions were encountered, and no year-to-year variability could be tested. Realism. Most models fulfil the criterion of realism that the relationships between the modelled phenomena (carbon and water exchange) and environment are described causally. Again several of the models were able to reproduce the responses of measurable variables such as gross primary production (GPP), ecosystem respiration and transpiration to environmental driving factors such as radiation and temperature. Stomatalconductance appears to be the most critical process causing differences in predicted fluxes of carbon and water between those models that accurately describe the annual totals of GPP, ecosystem respiration and transpiration.As a conclusion, several process-based models are available that produce accurate estimates of carbon and water fluxes at several forest sites of Europe. This considerable accuracy fulfils one requirement of models to be able to predict the impacts of climate change on the carbon balance of European forests. However, the generality of the models should be further evaluated by expanding the range of testing over both time and space. In addition, differences in behaviour between models at the process level indicate requirement of further model testing, with special emphasis on modelling stomatal conductance realistically.
    Type of Medium: Electronic Resource
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  • 2
    ISSN: 1432-1939
    Keywords: Nitrate reductase ; Chlorophyll content ; Leaf Specific Area ; Open-forest ; Closed-forest (rainforest)
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Summary A study of the sun leaves of two closed-forest (rainforest) and eight open-forest communities in subtropical southeast Queensland, Australia, showed that a large number of pioneer woody species in closed-forests had high levels of nitrate reductase (EC 1.6.6.1), whereas only a few herbaceous species in the open-forests showed high levels. There was a continuously declining gradient in nitrate reductase activity from pioneer to mature-forest species in all communities, associated with a decrease in Leaf Specific Area. The level of nitrate reductase activity was lower in certain plant families (including sclerophyllous monocotyledons, small-leaved composites and legumes), but still showed the same general relationship with Leaf Specific Area. The decrease in Leaf Specific Area is associated with an increase in both the dry weight: fresh weight ratio and the chlorophyll a: chlorophyll b ratio of the leaves. Three groups of plants can be recognised by nitrate reductase activity plotted against water content (% fresh weight) of their leaves-(1) pioneer, (2) mature-forest and (3) semi-sclerophyllous species. As the proportion of cytoplasm to structural tissue (indicated by water content) in leaves increases, there is a continuous increase in (a) nitrate reductase activity (b) total chlorophyll (per unit dry weight) (c) the proportion of chlorophyll b to chlorophyll a and (b) chloroplastic isoform of glutamine synthetase. These attributes are associated with high nitrogen content in the leaves and high photosynthetic potentials, resulting in rapid growth rates of pioneer species.
    Type of Medium: Electronic Resource
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  • 3
    ISSN: 1573-5052
    Keywords: Fertilization experiment ; Irrigation experiment ; Leaves and twigs characteristics
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract A multifactorial ANOVA experiment was designed for a Quercus ilex forest in the Prades mountains in Tarragona (NE Spain). The purpose of this study was to clarify the relative importance of water, nitrogen and phosphorus as factors controlling primary production. Eight plots comprising all possible combinations of the three factors (including a control) were laid out in three replicate blocks. Fertilizers were applied to the appropriate treatments in March 1989 with a dosage of 125 kg of P/ha and 250 kg N/ha. Irrigation was applied with a rate of 20 mm per week during the warm season. To evaluate the effects on canopy structure we measured specific leaf weight (mg/cm2), average leaf weight (mg), average twig height and average twig length. These variables were selected as they are the most likely to manifest changes over short time periods following changes in environmental conditions. The values of these parameters before initial treatments (autumn 1988) and after treatments (summer 1990) were analyzed. The results obtained show that water and nitrogen have a greater effect than phosphorus on tree canopy structure, at least during initial development.
    Type of Medium: Electronic Resource
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  • 4
    Publication Date: 2021-05-19
    Description: The Tremoctopodidae is a small group of epipelagig to mesopelagic octopuses with a single genus (Tremoctopus) and three recognized species. Of them, T. violaceus is known to occur in Atlantic waters between 40°N and 35°S, including the Mediterranean and the Gulf of Mexico, with only two records for the Caribbean (Cayman Islands and eastern Venezuela). An adult female of this species was recently colleected at Islas del Rossario, off Cartagena, constituting the first record of this species for Colombia.
    Description: El Tremoctopodidae es un pequeño grupo de epipelagig a mesopelágicas pulpos con un solo género (Tremoctopus) y tres especies reconocidas. De ellos, T. violaceus se sabe que se producen en aguas del Atlántico entre los 40 ° N y 35 ° S, incluyendo el Mediterráneo y el Golfo de México, con sólo dos registros para el Caribe (Islas Caimán y el este de Venezuela). Una hembra adulta de esta especie ha sido recientemente colleected en Islas del Rossario, frente a Cartagena, lo que constituye el primer registro de esta especie para Colombia.
    Description: Published
    Description: Octopus, Tremoctopodidae
    Keywords: Cephalopod fisheries
    Repository Name: AquaDocs
    Type: Journal Contribution
    Format: pp.285-288
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  • 5
    Publication Date: 2021-05-19
    Description: Between 1998 and 2001 the Invemar-Macrofauna cruises collected a series of deep water samples between the GuajiraPeninsula and off the Gulf of Urabá, ranging in depths from 270 to about 520 m. Among the material collected a single chiton speecies Leptochiton binghami was recognized. The new locality record extends the known distributional range of the species to Colombian waters.
    Description: Entre 1998 y 2001, el Invemar-Macrofauna cruceros recogido una serie de profundas muestras de agua entre la GuajiraPeninsula y fuera del Golfo de Urabá, en profundidades que van de 270 a unos 520 m. Entre el material recogido un solo chitón speecies Leptochiton binghami fue reconocido. El nuevo registro se extiende la localidad conocida gama de distribución de las especies a las aguas colombianas.
    Description: Published
    Description: Polyplacophora, chiton
    Keywords: Distribution ; Distribution
    Repository Name: AquaDocs
    Type: Journal Contribution
    Format: pp.275-278
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  • 6
    Publication Date: 2021-05-19
    Description: Se estudió la composición y abundancia de los moluscos bentónicos encontrados en el departamento de La Guajira al norte del Caribe colombiano. Para esto se realizó un crucero de investigación a bordo del B/I Ancón del INVEMAR en donde se llevaron a cabo arrastres a 10 y 50 m de profundidad. Se recolectó un total de 4840 individuos, identificándose 215 especies pertenecientes a las clases Gastropoda, Bivalvia, Scaphopoda, Cephalopoda y Polyplacophora, dentro de las cuales 19 fueron especies registradas por primera vez para el departamento. La clase Gastropoda presentó el mayor número de especies (52 %) y Bivalvia la mayor abundancia (71 % de los individuos), siendo el bivalvo Laevicardium sybariticum la especie más abundante del área de estudio. Los análisis multivariados utilizados no mostraron patrones claramente definidos con relación a la profundidad y el tipo de sedimento.
    Description: Benthic mollusks of La Guajira (10 and 50 m depths), Colombian Caribbean. We studied the composition and abundance of benthic mollusks found in La Guajira along the northern Caribbean coast of Colombia. A research cruise was carried out on board the R/V Ancón INVEMAR, from which bottom trawlings were conducted at 10 and 50 m depths. A total of 4840 individuals were collected, and 215 species identified belonging to the classes Gastropoda, Bivalvia, Scaphopoda, Cephalopoda and Polyplacophora. Nineteen species were recorded for the first time in La Guajira. The class Gastropoda had the highest number of species (52 %) and Bivalvia showed the greatest abundance (71 % of individuals). The bivalve Laevicardium sybariticum was the most abundant species in the study area. Multivariate analysis showed no defined patterns in relation to depth and bottom type.
    Description: Published
    Description: Mollusks, Richness
    Keywords: Abundance
    Repository Name: AquaDocs
    Type: Journal Contribution
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  • 7
    Publication Date: 2021-05-19
    Description: El desarrollo industrial y económico de Colombia se ha expandido en la búsqueda de nuevos recursos minerales hacia los límites del mar territorial. La prospección y construcción de infraestructuras en el mar plantean nuevos retos para el desarrollo sostenible del país. Este estudio de línea base se realizó con el fin de conocer las especies de invertebrados marinos que se han establecido sobre las únicas plataformas permanentes para la explotación de gas ubicadas mar afuera en La Guajira, al norte del Caribe colombiano: plataformas A y B, construidas sobre fondos de 18 y 33 m de profundidad, respectivamente. Por medio de buceo autónomo Scuba, se recolectaron e identificaron 116 especies de invertebrados marinos. Los crustáceos presentaron la mayor riqueza de especies (50 especies), con el infraorden Brachyura como el mejor representado con 10 familias y acumulando 44% de las especies. Los moluscos comprendieron el segundo grupo con 29 especies, seguidos de anélidos con 14, esponjas con 12, cnidarios con 7 y finalmente equinodermos con 4. Los organismos sésiles filtradores dominaron en número de individuos, mientras las formas móviles presentaron un mayor número de especies. Los balanos (Balanus spp.), el octocoral Carijoa riisei y las esponjas fueron los principales constituyentes de la fauna fouling asociada a las estructuras. Aunque no existen estudios previos para el área de estudio ni para el Caribe sur, se considera que la comunidad de invertebrados marinos que ha colonizado las estructuras de las plataformas de gas de La Guajira exhibe una alta riqueza de especies e individuos asociados.
    Description: The industrial and economic development of Colombia has expanded its limits towards the territorial sea in the search for new resources. The prospection and construction of infrastructures in the sea challenge new alternatives for the sustainable development of the country. The main goal of this study was to build a baseline inventory of the marine invertebrates associated to two gas platforms located offshore in La Guajira, at the northeastern Colombian Caribbean Sea: platforms A and B, sitting on sandy bottoms at 18 and 33 m depth, respectively. This inventory includes a total of 116 species of marine invertebrates that were collected by Scuba diving. Crustaceans had the greatest richness with 50 species, from which the infraorder Brachyura was the best represented with 10 families including approximately 44% of species. Mollusks comprised the second largest group with 29 species, followed by annelids with 14 species, sponges with 12 species, cnidarians with 7 species, and finally echinoderms with 4 species. Filter-feeding and sessile organisms dominated in abundance, while mobile species showed a larger number of species. The barnacles complex ( Balanus spp.), the octocoral Carijoa riisei and sponges were the main components of the fouling fauna on the structures. Although there are no previous studies for the study area and the southern Caribbean, it is considered that the invertebrates community associated to gas platforms in La Guajira exhibit both high species richness and a large abundance of organisms
    Description: Published
    Keywords: Artificial substrates ; Biofouling ; Macrofauna ; Inventory of species ; ASFA15::A::Artificial substrata ; ASFA15::I::Inventories
    Repository Name: AquaDocs
    Type: Journal Contribution , Refereed
    Format: pp.361-386
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  • 8
    Publication Date: 2021-05-19
    Description: We describe a new bathyal species of scaphopod beloning to the genus Striocadulus Emerson based on conchological and radular characters. The specimens were collected at a depth of 404-412 m off Bocas de Ceniza (Colombian Caribbean). Striocadulus magdalenensis new species can be distinguised from its other congeners by differences in its apical section, and both number and extent of longitudianl striae. This is the first record of this genus in the Atlantic Ocean.
    Description: Se describe una nueva especie batial de escafópodo perteneciente al género Striocadulus Emerson basándose en características de la concha y la rádula. Los especímenes fueron colectados a 404-412 m de profundidad frente a Bocas de Ceniza (Caribe colombiano). Striocadulus magdalenensis spec. nov. se distingue de sus otros congéneres pro diferencias en la sección apical y en el número y extensión de las estrías longitudinales. Este es el primer registro del género para el océano Atlántico.
    Description: JCD
    Description: Published
    Keywords: Bathyal zone ; Taxonomy ; Bathyal zone ; Taxonomy ; Marine molluscs
    Repository Name: AquaDocs
    Type: Journal Contribution
    Format: pp.143-150
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  • 9
    Publication Date: 2015-06-04
    Description: The Mediterranean region is a hot spot of climate change vulnerable to increased droughts and heat waves. Scaling carbon fluxes from leaf to landscape levels is particularly challenging under drought conditions. We aimed to improve the mechanistic understanding of the seasonal acclimation of photosynthesis and morphology in sunlit and shaded leaves of four Mediterranean trees ( Quercus ilex L., Pinus halepensis Mill., Arbutus unedo L. and Quercus pubescens Willd.) under natural conditions. V c,max and J max were not constant, and mesophyll conductance was not infinite, as assumed in most terrestrial biosphere models, but varied significantly between seasons, tree species and leaf position. Favourable conditions in winter led to photosynthetic recovery and growth in the evergreens. Under moderate drought, adjustments in the photo/biochemistry and stomatal/mesophyllic diffusion behaviour effectively protected the photosynthetic machineries. Severe drought, however, induced early leaf senescence mostly in A. unedo and Q. pubescens , and significantly increased leaf mass per area in Q. ilex and P. halepensis . Shaded leaves had lower photosynthetic potentials but cushioned negative effects during stress periods. Species-specificity, seasonal variations and leaf position are key factors to explain vegetation responses to abiotic stress and hold great potential to reduce uncertainties in terrestrial biosphere models especially under drought conditions.
    Print ISSN: 0829-318X
    Electronic ISSN: 1758-4469
    Topics: Agriculture, Forestry, Horticulture, Fishery, Domestic Science, Nutrition
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  • 10
    Publication Date: 2016-06-08
    Description: Bacterial small RNAs (sRNAs) play essential roles in the post-transcriptional control of gene expression. To improve their detection by conventional microarrays, we designed a custom microarray containing a group of probes targeting known and some putative Escherichia coli sRNAs. To assess its potential in detection of sRNAs, RNA profiling experiments were performed with total RNA extracted from E. coli MG1655 cells exponentially grown in rich (Luria–Bertani) and minimal (M9/glucose) media. We found that many sRNAs could yield reasonably strong and statistically significant signals corresponding to nearly all sRNAs annotated in the EcoCyc database. Besides differential expression of two sRNAs (GcvB and RydB), expression of other sRNAs was less affected by the composition of the growth media. Other examples of the differentially expressed sRNAs were revealed by comparing gene expression of the wild-type strain and its isogenic mutant lacking functional poly(A) polymerase I ( pcnB ). Further, northern blot analysis was employed to validate these data and to assess the existence of new putative sRNAs. Our results suggest that the use of custom microarrays with improved capacities for detection of sRNAs can offer an attractive opportunity for efficient gene expression profiling of sRNAs and their target mRNAs at the whole transcriptome level.
    Keywords: Physiology & Biochemistry
    Print ISSN: 0378-1097
    Electronic ISSN: 1574-6968
    Topics: Biology
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