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  • 1
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    An international intercomparison of stable carbon isotope composition measurements of dissolved inorganic carbon in seawater (2019)
    Wiley
    Details
    Publication Date: 2019
    Description: Abstract We report results of an intercomparison of stable carbon isotope ratio measurements in seawater dissolved inorganic carbon (δ13C‐DIC) which involved 16 participating laboratories from various parts of the world. The intercomparison involved distribution of samples of a Certified Reference Material for seawater DIC concentration and alkalinity and a preserved sample of deep seawater collected at 4000 m in the northeastern Atlantic Ocean. The between‐lab standard deviation of reported uncorrected values measured with diverse analytical, detection, and calibration methods was 0.11‰ (1σ). The multi‐lab average δ13C‐DIC value reported for the deep seawater sample was consistent within 0.1‰ with historical measured values for the same water mass. Application of a correction procedure based on a consensus value for the distributed reference material, improved the between‐lab standard deviation to 0.06‰. The magnitude of the corrections were similar to those used to correct independent data sets using crossover comparisons, where deep water analyses from different cruises are compared at nearby locations. Our results demonstrate that the accuracy/uncertainty target proposed by the Global Ocean Observing System (±0.05‰) is attainable, but only if an aqueous phase reference material for δ13C‐DIC is made available and used by the measurement community. Our results imply that existing Certified Reference Materials used for seawater DIC and alkalinity quality control are suitable for this purpose, if a “Certified” or internally consistent “consensus” value for δ13C‐DIC can be assigned to various batches.
    Electronic ISSN: 1541-5856
    Topics: Biology , Geosciences
    Published by Wiley on behalf of The Association for the Sciences of Limnology and Oceanography (ASLO).
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  • 2
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    Probing electric field control of magnetism using ferromagnetic resonance (2015)
    Springer Nature
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    Publication Date: 2015-01-31
    Description: Article Multiferroic BiFeO 3 is promising for applications where electric and magnetic fields need to be coupled, for example, in magnetic data storage. Here, combining theory and experiment the authors provide a microscopic insight into the switching of magnetization by electric fields in BiFeO 3 . Nature Communications doi: 10.1038/ncomms7082 Authors: Ziyao Zhou, Morgan Trassin, Ya Gao, Yuan Gao, Diana Qiu, Khalid Ashraf, Tianxiang Nan, Xi Yang, S. R. Bowden, D. T. Pierce, M. D. Stiles, J. Unguris, Ming Liu, Brandon M. Howe, Gail J. Brown, S. Salahuddin, R. Ramesh, Nian X. Sun
    Electronic ISSN: 2041-1723
    Topics: Biology , Chemistry and Pharmacology , Natural Sciences in General , Physics
    Published by Springer Nature
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  • 3
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    The provenances of asteroids, and their contributions to the volatile inventories of the terrestrial planets (2012)
    American Association for the Advancement of Science (AAAS)
    Details
    Publication Date: 2012-07-17
    Description: Determining the source(s) of hydrogen, carbon, and nitrogen accreted by Earth is important for understanding the origins of water and life and for constraining dynamical processes that operated during planet formation. Chondritic meteorites are asteroidal fragments that retain records of the first few million years of solar system history. The deuterium/hydrogen (D/H) values of water in carbonaceous chondrites are distinct from those in comets and Saturn's moon Enceladus, implying that they formed in a different region of the solar system, contrary to predictions of recent dynamical models. The D/H values of water in carbonaceous chondrites also argue against an influx of water ice from the outer solar system, which has been invoked to explain the nonsolar oxygen isotopic composition of the inner solar system. The bulk hydrogen and nitrogen isotopic compositions of CI chondrites suggest that they were the principal source of Earth's volatiles.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Alexander, C M O'D -- Bowden, R -- Fogel, M L -- Howard, K T -- Herd, C D K -- Nittler, L R -- New York, N.Y. -- Science. 2012 Aug 10;337(6095):721-3. doi: 10.1126/science.1223474. Epub 2012 Jul 12.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Terrestrial Magnetism, Carnegie Institution of Washington, 5241 Broad Branch Road, NW, Washington, DC 20015, USA. alexander@dtm.ciw.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22798405" target="_blank"〉PubMed〈/a〉
    Keywords: Carbon/*analysis ; Carbon Isotopes/analysis ; Deuterium/analysis ; *Earth (Planet) ; Evolution, Planetary ; Hydrogen/*analysis ; Ice ; *Minor Planets ; Nitrogen/*analysis ; Nitrogen Isotopes/analysis ; Oxygen Isotopes/analysis ; *Planets ; Water
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
    Published by American Association for the Advancement of Science (AAAS)
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  • 4
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    A reduced organic carbon component in martian basalts (2012)
    American Association for the Advancement of Science (AAAS)
    Details
    Publication Date: 2012-05-26
    Description: The source and nature of carbon on Mars have been a subject of intense speculation. We report the results of confocal Raman imaging spectroscopy on 11 martian meteorites, spanning about 4.2 billion years of martian history. Ten of the meteorites contain abiotic macromolecular carbon (MMC) phases detected in association with small oxide grains included within high-temperature minerals. Polycyclic aromatic hydrocarbons were detected along with MMC phases in Dar al Gani 476. The association of organic carbon within magmatic minerals indicates that martian magmas favored precipitation of reduced carbon species during crystallization. The ubiquitous distribution of abiotic organic carbon in martian igneous rocks is important for understanding the martian carbon cycle and has implications for future missions to detect possible past martian life.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Steele, A -- McCubbin, F M -- Fries, M -- Kater, L -- Boctor, N Z -- Fogel, M L -- Conrad, P G -- Glamoclija, M -- Spencer, M -- Morrow, A L -- Hammond, M R -- Zare, R N -- Vicenzi, E P -- Siljestrom, S -- Bowden, R -- Herd, C D K -- Mysen, B O -- Shirey, S B -- Amundsen, H E F -- Treiman, A H -- Bullock, E S -- Jull, A J T -- New York, N.Y. -- Science. 2012 Jul 13;337(6091):212-5. doi: 10.1126/science.1220715. Epub 2012 May 24.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Geophysical Laboratory, Carnegie Institution of Washington, 5251 Broad Branch Road, NW, Washington, DC 20015, USA. asteele@ciw.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22628557" target="_blank"〉PubMed〈/a〉
    Keywords: Carbon/*analysis ; Crystallization ; Extraterrestrial Environment ; *Mars ; *Meteoroids ; Organic Chemicals/*analysis ; Oxidation-Reduction ; Oxides/analysis ; Polycyclic Hydrocarbons, Aromatic/*analysis/chemistry ; Silicates/*chemistry ; Spectrum Analysis, Raman
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
    Published by American Association for the Advancement of Science (AAAS)
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  • 5
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    Multiple instances of ancient balancing selection shared between humans and chimpanzees (2013)
    American Association for the Advancement of Science (AAAS)
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    Publication Date: 2013-02-16
    Description: Instances in which natural selection maintains genetic variation in a population over millions of years are thought to be extremely rare. We conducted a genome-wide scan for long-lived balancing selection by looking for combinations of SNPs shared between humans and chimpanzees. In addition to the major histocompatibility complex, we identified 125 regions in which the same haplotypes are segregating in the two species, all but two of which are noncoding. In six cases, there is evidence for an ancestral polymorphism that persisted to the present in humans and chimpanzees. Regions with shared haplotypes are significantly enriched for membrane glycoproteins, and a similar trend is seen among shared coding polymorphisms. These findings indicate that ancient balancing selection has shaped human variation and point to genes involved in host-pathogen interactions as common targets.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3612375/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3612375/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Leffler, Ellen M -- Gao, Ziyue -- Pfeifer, Susanne -- Segurel, Laure -- Auton, Adam -- Venn, Oliver -- Bowden, Rory -- Bontrop, Ronald -- Wall, Jeffrey D -- Sella, Guy -- Donnelly, Peter -- McVean, Gilean -- Przeworski, Molly -- 075491/Z/04/B/Wellcome Trust/United Kingdom -- 086084/Z/08/Z/Wellcome Trust/United Kingdom -- 090532/Wellcome Trust/United Kingdom -- 090532/Z/09/Z/Wellcome Trust/United Kingdom -- 095552/Wellcome Trust/United Kingdom -- 095552/Z/11/Z/Wellcome Trust/United Kingdom -- GM72861/GM/NIGMS NIH HHS/ -- HG005226/HG/NHGRI NIH HHS/ -- R01 GM072861/GM/NIGMS NIH HHS/ -- T32 GM007197/GM/NIGMS NIH HHS/ -- Howard Hughes Medical Institute/ -- New York, N.Y. -- Science. 2013 Mar 29;339(6127):1578-82. doi: 10.1126/science.1234070. Epub 2013 Feb 14.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Human Genetics, University of Chicago, Chicago, IL 60637, USA. emleffler@uchicago.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/23413192" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Base Sequence ; Genetic Association Studies ; Genome, Human/*genetics ; Haplotypes ; Host-Pathogen Interactions/*genetics ; Humans ; Molecular Sequence Data ; Pan troglodytes/*genetics ; Pedigree ; Polymorphism, Single Nucleotide ; *Selection, Genetic
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
    Published by American Association for the Advancement of Science (AAAS)
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  • 6
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    Drive against hotspot motifs in primates implicates the PRDM9 gene in meiotic recombination (2010)
    American Association for the Advancement of Science (AAAS)
    Details
    Publication Date: 2010-01-02
    Description: Although present in both humans and chimpanzees, recombination hotspots, at which meiotic crossover events cluster, differ markedly in their genomic location between the species. We report that a 13-base pair sequence motif previously associated with the activity of 40% of human hotspots does not function in chimpanzees and is being removed by self-destructive drive in the human lineage. Multiple lines of evidence suggest that the rapidly evolving zinc-finger protein PRDM9 binds to this motif and that sequence changes in the protein may be responsible for hotspot differences between species. The involvement of PRDM9, which causes histone H3 lysine 4 trimethylation, implies that there is a common mechanism for recombination hotspots in eukaryotes but raises questions about what forces have driven such rapid change.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3828505/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3828505/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Myers, Simon -- Bowden, Rory -- Tumian, Afidalina -- Bontrop, Ronald E -- Freeman, Colin -- MacFie, Tammie S -- McVean, Gil -- Donnelly, Peter -- 086084/Wellcome Trust/United Kingdom -- 086786/Wellcome Trust/United Kingdom -- 090532/Wellcome Trust/United Kingdom -- Wellcome Trust/United Kingdom -- New York, N.Y. -- Science. 2010 Feb 12;327(5967):876-9. doi: 10.1126/science.1182363. Epub 2009 Dec 31.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Statistics, Oxford University, 1 South Parks Road, Oxford OX1 3TG, UK. myers@stats.ox.ac.uk〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/20044541" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Base Sequence ; Crossing Over, Genetic ; DNA/metabolism ; Evolution, Molecular ; Histone-Lysine N-Methyltransferase/chemistry/*genetics/metabolism ; Histones/metabolism ; Humans ; Meiosis/*genetics ; Methylation ; Pan troglodytes/*genetics ; Polymorphism, Single Nucleotide ; *Recombination, Genetic ; Species Specificity
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
    Published by American Association for the Advancement of Science (AAAS)
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  • 7
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    A fine-scale chimpanzee genetic map from population sequencing (2012)
    American Association for the Advancement of Science (AAAS)
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    Publication Date: 2012-03-17
    Description: To study the evolution of recombination rates in apes, we developed methodology to construct a fine-scale genetic map from high-throughput sequence data from 10 Western chimpanzees, Pan troglodytes verus. Compared to the human genetic map, broad-scale recombination rates tend to be conserved, but with exceptions, particularly in regions of chromosomal rearrangements and around the site of ancestral fusion in human chromosome 2. At fine scales, chimpanzee recombination is dominated by hotspots, which show no overlap with those of humans even though rates are similarly elevated around CpG islands and decreased within genes. The hotspot-specifying protein PRDM9 shows extensive variation among Western chimpanzees, and there is little evidence that any sequence motifs are enriched in hotspots. The contrasting locations of hotspots provide a natural experiment, which demonstrates the impact of recombination on base composition.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3532813/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3532813/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Auton, Adam -- Fledel-Alon, Adi -- Pfeifer, Susanne -- Venn, Oliver -- Segurel, Laure -- Street, Teresa -- Leffler, Ellen M -- Bowden, Rory -- Aneas, Ivy -- Broxholme, John -- Humburg, Peter -- Iqbal, Zamin -- Lunter, Gerton -- Maller, Julian -- Hernandez, Ryan D -- Melton, Cord -- Venkat, Aarti -- Nobrega, Marcelo A -- Bontrop, Ronald -- Myers, Simon -- Donnelly, Peter -- Przeworski, Molly -- McVean, Gil -- 076113/E/04/Z/Wellcome Trust/United Kingdom -- 086084/Wellcome Trust/United Kingdom -- 086084/Z/08/Z/Wellcome Trust/United Kingdom -- 086786/Z/08/Z/Wellcome Trust/United Kingdom -- 090532/Wellcome Trust/United Kingdom -- 090532/Z/09/Z/Wellcome Trust/United Kingdom -- R01 GM083098/GM/NIGMS NIH HHS/ -- R01 GM83098/GM/NIGMS NIH HHS/ -- R01 HG004428/HG/NHGRI NIH HHS/ -- T32 GM007197/GM/NIGMS NIH HHS/ -- Howard Hughes Medical Institute/ -- New York, N.Y. -- Science. 2012 Apr 13;336(6078):193-8. doi: 10.1126/science.1216872. Epub 2012 Mar 15.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Wellcome Trust Centre for Human Genetics, Oxford , UK.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/22422862" target="_blank"〉PubMed〈/a〉
    Keywords: Animals ; Base Sequence ; Chromosome Mapping ; Chromosomes, Human, Pair 2/genetics ; Chromosomes, Mammalian/*genetics ; CpG Islands ; Evolution, Molecular ; Female ; Genetic Variation ; Haplotypes ; High-Throughput Nucleotide Sequencing ; Histone-Lysine N-Methyltransferase/genetics ; Humans ; Male ; Pan troglodytes/*genetics ; Polymorphism, Single Nucleotide ; *Recombination, Genetic ; Sequence Analysis, DNA ; Species Specificity
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 8
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    Unique meteorite from early Amazonian Mars: water-rich basaltic breccia Northwest Africa 7034 (2013)
    American Association for the Advancement of Science (AAAS)
    Details
    Publication Date: 2013-01-05
    Description: We report data on the martian meteorite Northwest Africa (NWA) 7034, which shares some petrologic and geochemical characteristics with known martian meteorites of the SNC (i.e., shergottite, nakhlite, and chassignite) group, but also has some unique characteristics that would exclude it from that group. NWA 7034 is a geochemically enriched crustal rock compositionally similar to basalts and average martian crust measured by recent Rover and Orbiter missions. It formed 2.089 +/- 0.081 billion years ago, during the early Amazonian epoch in Mars' geologic history. NWA 7034 has an order of magnitude more indigenous water than most SNC meteorites, with up to 6000 parts per million extraterrestrial H(2)O released during stepped heating. It also has bulk oxygen isotope values of Delta(17)O = 0.58 +/- 0.05 per mil and a heat-released water oxygen isotope average value of Delta(17)O = 0.330 +/- 0.011 per mil, suggesting the existence of multiple oxygen reservoirs on Mars.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Agee, Carl B -- Wilson, Nicole V -- McCubbin, Francis M -- Ziegler, Karen -- Polyak, Victor J -- Sharp, Zachary D -- Asmerom, Yemane -- Nunn, Morgan H -- Shaheen, Robina -- Thiemens, Mark H -- Steele, Andrew -- Fogel, Marilyn L -- Bowden, Roxane -- Glamoclija, Mihaela -- Zhang, Zhisheng -- Elardo, Stephen M -- New York, N.Y. -- Science. 2013 Feb 15;339(6121):780-5. doi: 10.1126/science.1228858. Epub 2013 Jan 3.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Institute of Meteoritics, University of New Mexico, Albuquerque, NM 87131, USA. agee@unm.edu〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/23287721" target="_blank"〉PubMed〈/a〉
    Keywords: Carbon/analysis ; Crystallization ; Iron/analysis ; Manganese/analysis ; *Mars ; *Meteoroids ; North America ; Oxygen Isotopes/analysis ; Radiometric Dating ; Water/analysis/*chemistry
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
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  • 9
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    Interfacial coupling in multiferroic/ferromagnet heterostructures (2013)
    American Physical Society (APS)
    Details
    Publication Date: 2013-05-01
    Description: Author(s): M. Trassin, J. D. Clarkson, S. R. Bowden, Jian Liu, J. T. Heron, R. J. Paull, E. Arenholz, D. T. Pierce, and J. Unguris We report local probe investigations of the magnetic interaction between BiFeO 3 films and a ferromagnetic Co 0.9 Fe 0.1 layer. Within the constraints of intralayer exchange coupling in the Co 0.9 Fe 0.1 , the multiferroic imprint in the ferromagnet results in a collinear arrangement of the local magnetizat... [Phys. Rev. B 87, 134426] Published Tue Apr 30, 2013
    Keywords: Magnetism
    Print ISSN: 1098-0121
    Electronic ISSN: 1095-3795
    Topics: Physics
    Published by American Physical Society (APS)
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  • 10
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    Seasonal dynamics in mosquito abundance and temperature do not influence avian malaria prevalence in the Himalayan foothills (2017)
    Wiley
    Details
    Publication Date: 2017-09-05
    Description: We examined seasonal prevalence in avian haemosporidians ( Plasmodium and Haemoproteus ) in migrant and resident birds in western Himalaya, India. We investigated how infection with haemosporidians in avian hosts is associated with temporal changes in temperature and mosquito abundance along with host abundance and life-history traits (body mass). Using molecular methods for parasite detection and sequencing partial cytochrome b gene, 12 Plasmodium and 27 Haemoproteus lineages were isolated. Our 1-year study from December 2008 to December 2009 in tropical Himalayan foothills revealed a lack of seasonal variation in Plasmodium spp. prevalence in birds despite a strong correlation between mosquito abundance and temperature. The probability of infection with Plasmodium decreased with increase in temperature. Total parasite prevalence and specifically Plasmodium prevalence showed an increase with average avian body mass. In addition, total prevalence exhibited a U-shaped relationship with avian host abundance. There was no difference in prevalence of Plasmodium spp. or Haemoproteus spp. across altitudes; parasite prevalence in high-altitude locations was mainly driven by the seasonal migrants. One Haemoproteus lineage showed cross-species infections between migrant and resident birds. This is the first molecular study in the tropical Himalayan bird community that emphasizes the importance of studying seasonal variation in parasite prevalence. Our study provides a basis for further evolutionary study on the epidemiology of avian malaria and spread of disease across Himalayan bird communities, which may not have been exposed to vectors and parasites throughout the year, with consequential implications to the risk of infection to naïve resident birds in high altitude. This is the first molecular study in the tropical Himalayan bird community which explores the seasonal prevalence in avian malaria and how it is influenced by mosquito abundance and temperature along with host life-history traits. We found mosquito abundance and temperature shows variation throughtout the year, however, it do not influence the prevalence in this tropical system.
    Electronic ISSN: 2045-7758
    Topics: Biology
    Published by Wiley
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