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  • 1
    Electronic Resource
    Electronic Resource
    Analysis of the interaction of radionuclides with solid phase in surface waters using laboratory model experiments: Methodical problems (1988)
    Springer
    Journal of radioanalytical and nuclear chemistry 125 (1988), S. 295-315 
    Details
    ISSN: 1588-2780
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology , Energy, Environment Protection, Nuclear Power Engineering
    Notes: Abstract Use of laboratory model experiments for analysis of interaction of radionuclides with surface water solids is connected with methodical problems concerning selection of solid phase, sampling, storage and pretreatment of solid phase, concentration of radionuclide, selection of liquid to solid ratio, adsorption of radionuclide on vessel walls, choice of experimental procedures and change in radionuclide speciation in the solid phase. These problems are discussed on the basis of literature data and of experiments with radiocobalt or radiocesium in a system river water-suspended solids or bottom sediments. Possible ways of solution of the problems are shown. Two modifications of batch method are described in detail and their merits or drawbacks evaluated. Comparison of the modifications shows their possible use as complementary methods for the study of radionuclide behaviour in surface waters.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF02041689
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    Paper (German National Licenses)
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  • 2
    Electronic Resource
    Electronic Resource
    Factors affecting interaction of radiocesium with freshwater solids (1989)
    Springer
    Journal of radioanalytical and nuclear chemistry 133 (1989), S. 359-376 
    Details
    ISSN: 1588-2780
    Source: Springer Online Journal Archives 1860-2000
    Topics: Chemistry and Pharmacology , Energy, Environment Protection, Nuclear Power Engineering
    Notes: Abstract The paper aims at the analysis of principal factors affecting the interaction of radiocesium with freshwater solids, important for the migration of radiocesium in rivers. Uptake of radiocesium by bottom sediments and suspended solids from small streams was studied as a function of pH and composition of aqueous phase, of the concentration of cesium in water and of the composition of freshwater solids, using laboratory model experiments. pH had negligible effect on the uptake in the pH range 5–9, the uptake decreased at pH values less than 3–5 depending on the nature and concentration of the solids. Addition of cations suppressed the uptake in the order K+〉Na+〉Ca2+, the suppression began at 0.001, 0.01 and 0.1 mol.dm−3 concentration, respectively. Increase in cesium concentration in water caused a decrease of radiocesium uptake, but at very low concentrations of cesium combined with higher concentration of sediment (2g·dm−3) the uptake was independent of cesium concentration. Removal of carbonates, oxidic coatings and organic matter from a sediment did not affect the sorption properties of the sediment. The nature of the effects found confirms that cesium is sorbed mainly by clay components of freshwater solids. Results obtained are compared with literature data and conclusions are drawn on the importance of the factors studied for modelling of radiocesium migration in rivers.
    Type of Medium: Electronic Resource
    URL: http://dx.doi.org/10.1007/BF02060509
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  • 3
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    On the synthesis of H{infty} consensus for multi-agent systems (2015)
    Oxford University Press
    Details
    Publication Date: 2015-09-15
    Description: This paper studies the H consensus problem of multi-agent systems by means of a simultaneous stabilization approach. It is shown that the H consensus design problem for n coupled agents can be equivalently characterized as a problem of the simultaneous H stabilization of n – 1 independent subsystems. A new consensus analysis condition is obtained by investigating the corresponding simultaneous H stabilization problem. Based upon the analysis condition, a necessary and sufficient condition is derived to guarantee the consensus of multi-agent systems with a prescribed H performance, where the controller gain matrix is not coupled with the Lyapunov matrices, but parametrized by a positive-definite matrix. Iterative convex optimization approaches are further developed to solve the synthesis condition and to choose the initial values. Finally, a numerical example is given to show the applicability of the results.
    Print ISSN: 0265-0754
    Electronic ISSN: 1471-6887
    Topics: Mathematics
    Published by Oxford University Press
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  • 4
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    Genome-wide association study identifies new susceptibility loci for adolescent idiopathic scoliosis in Chinese girls (2015)
    Springer Nature
    Details
    Publication Date: 2015-09-24
    Description: Article The authors perform a genome-wide association study of adolescent idiopathic scoliosis patients of Han Chinese descent, and identify 3 new loci for disease susceptibility. Nature Communications doi: 10.1038/ncomms9355 Authors: Zezhang Zhu, Nelson Leung-Sang Tang, Leilei Xu, Xiaodong Qin, Saihu Mao, Yueming Song, Limin Liu, Fangcai Li, Peng Liu, Long Yi, Jiang Chang, Long Jiang, Bobby Kin-Wah Ng, Benlong Shi, Wen Zhang, Jun Qiao, Xu Sun, Xusheng Qiu, Zhou Wang, Fei Wang, Dingding Xie, Ling Chen, Zhonghui Chen, Mengran Jin, Xiao Han, Zongshan Hu, Zhen Zhang, Zhen Liu, Feng Zhu, Bang-ping Qian, Yang Yu, Bing Wang, K. M. Lee, Wayne Y.W. Lee, T. P. Lam, Yong Qiu, Jack Chun-Yiu Cheng
    Electronic ISSN: 2041-1723
    Topics: Biology , Chemistry and Pharmacology , Natural Sciences in General , Physics
    Published by Springer Nature
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  • 5
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    Rac1 signalling modulates a STAT5/BCL-6 transcriptional switch on cell-cycle-associated target gene promoters (2012)
    Oxford University Press
    Details
    Publication Date: 2012-09-13
    Description: Gene expression depends on binding of transcriptional regulators to gene promoters, a process controlled by signalling pathways. The transcriptional repressor B-cell lymphoma (BCL)-6 downregulates genes involved in cell-cycle progression and becomes inactivated following phosphorylation by the Rac1 GTPase-activated protein kinase PAK1. Interestingly, the DNA motifs recognized by BCL-6 and signal transducers and activators of transcription 5 (STAT5) are similar. Because STAT5 stimulation in epithelial cells can also be triggered by Rac1 signalling, we asked whether both factors have opposing roles in transcriptional regulation and whether Rac1 signalling may coordinate a transcription factor switch. We used chromatin immunoprecipitation to show that active Rac1 promotes release of the repressor BCL-6 while increasing binding of STAT5A to a BCL-6-regulated reporter gene. We further show in colorectal cell lines that the endogenous activation status of the Rac1/PAK1 pathway correlated with the phosphorylation status of BCL-6 and STAT5A. Three cellular genes (cyclin D2, p15 INK4B , small ubiquitin-like modifier 1) were identified to be inversely regulated by BCL-6 and STAT5A and responded to Rac1 signalling with increased expression and corresponding changes in promoter occupancy. Together, our data show that Rac1 signalling controls a group of target genes that are repressed by BCL-6 and activated by STAT5A, providing novel insights into the modulation of gene transcription by GTPase signalling.
    Print ISSN: 0305-1048
    Electronic ISSN: 1362-4962
    Topics: Biology
    Published by Oxford University Press
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  • 6
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    FaSD-somatic: a fast and accurate somatic SNV detection algorithm for cancer genome sequencing data (2014)
    Oxford University Press
    Details
    Publication Date: 2014-08-27
    Description: : Recent advances in high-throughput sequencing technologies have enabled us to sequence large number of cancer samples to reveal novel insights into oncogenetic mechanisms. However, the presence of intratumoral heterogeneity, normal cell contamination and insufficient sequencing depth, together pose a challenge for detecting somatic mutations. Here we propose a fast and an accurate somatic single-nucleotide variations (SNVs) detection program, FaSD-somatic. The performance of FaSD-somatic is extensively assessed on various types of cancer against several state-of-the-art somatic SNV detection programs. Benchmarked by somatic SNVs from either existing databases or de novo higher-depth sequencing data, FaSD-somatic has the best overall performance. Furthermore, FaSD-somatic is efficient, it finishes somatic SNV calling within 14 h on 50X whole genome sequencing data in paired samples. Availability and implementation: The program, datasets and supplementary files are available at http://jjwanglab.org/FaSD-somatic/ . Contact: wangdatou2009@gmail.com . Supplementary information: Supplementary data are available at Bioinformatics online
    Print ISSN: 1367-4803
    Electronic ISSN: 1460-2059
    Topics: Biology , Computer Science , Medicine
    Published by Oxford University Press
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  • 7
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    Vimentin regulates activation of the NLRP3 inflammasome (2015)
    Springer Nature
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    Publication Date: 2015-03-14
    Description: Article The mechanism of NLRP3 activation remains incompletely characterized. Here the authors show that it is dependent on vimentin, and that NLRP3-mediated lung injury and fibrosis induced by endotoxin, asbestos or bleomycin are reduced in vimentin-deficient mice. Nature Communications doi: 10.1038/ncomms7574 Authors: Gimena dos Santos, Micah R. Rogel, Margaret A. Baker, James R. Troken, Daniela Urich, Luisa Morales-Nebreda, Joseph A. Sennello, Mikhail A. Kutuzov, Albert Sitikov, Jennifer M. Davis, Anna P. Lam, Paul Cheresh, David Kamp, Dale K. Shumaker, G. R. Scott Budinger, Karen M. Ridge
    Electronic ISSN: 2041-1723
    Topics: Biology , Chemistry and Pharmacology , Natural Sciences in General , Physics
    Published by Springer Nature
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  • 8
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    Serum and Adipose Tissue Amino Acid Homeostasis in the Metabolically Healthy Obese (2014)
    American Chemical Society (ACS)
    Details
    Publication Date: 2014-06-25
    Description: Journal of Proteome Research DOI: 10.1021/pr500416v
    Print ISSN: 1535-3893
    Electronic ISSN: 1535-3907
    Topics: Chemistry and Pharmacology
    Published by American Chemical Society (ACS)
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  • 9
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    Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1 (1999)
    American Association for the Advancement of Science (AAAS)
    Details
    Publication Date: 1999-11-24
    Description: The complete genome sequence of the radiation-resistant bacterium Deinococcus radiodurans R1 is composed of two chromosomes (2,648,638 and 412,348 base pairs), a megaplasmid (177,466 base pairs), and a small plasmid (45,704 base pairs), yielding a total genome of 3,284, 156 base pairs. Multiple components distributed on the chromosomes and megaplasmid that contribute to the ability of D. radiodurans to survive under conditions of starvation, oxidative stress, and high amounts of DNA damage were identified. Deinococcus radiodurans represents an organism in which all systems for DNA repair, DNA damage export, desiccation and starvation recovery, and genetic redundancy are present in one cell.〈br /〉〈br /〉〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4147723/" target="_blank"〉〈img src="https://static.pubmed.gov/portal/portal3rc.fcgi/4089621/img/3977009" border="0"〉〈/a〉   〈a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4147723/" target="_blank"〉This paper as free author manuscript - peer-reviewed and accepted for publication〈/a〉〈br /〉〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉White, O -- Eisen, J A -- Heidelberg, J F -- Hickey, E K -- Peterson, J D -- Dodson, R J -- Haft, D H -- Gwinn, M L -- Nelson, W C -- Richardson, D L -- Moffat, K S -- Qin, H -- Jiang, L -- Pamphile, W -- Crosby, M -- Shen, M -- Vamathevan, J J -- Lam, P -- McDonald, L -- Utterback, T -- Zalewski, C -- Makarova, K S -- Aravind, L -- Daly, M J -- Minton, K W -- Fleischmann, R D -- Ketchum, K A -- Nelson, K E -- Salzberg, S -- Smith, H O -- Venter, J C -- Fraser, C M -- R01 CA077712/CA/NCI NIH HHS/ -- New York, N.Y. -- Science. 1999 Nov 19;286(5444):1571-7.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Institute for Genomic Research, 9712 Medical Center Drive, Rockville, MD 20850, USA.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/10567266" target="_blank"〉PubMed〈/a〉
    Keywords: Bacterial Proteins/biosynthesis/chemistry/genetics ; Catalase/genetics ; Chromosomes, Bacterial/genetics ; DNA Damage ; DNA Repair/genetics ; DNA, Bacterial/genetics ; Energy Metabolism ; Genes, Bacterial ; *Genome, Bacterial ; Gram-Positive Cocci/chemistry/classification/*genetics/radiation effects ; Molecular Sequence Data ; Open Reading Frames ; Oxidative Stress ; *Physical Chromosome Mapping ; Plasmids ; Radiation Tolerance ; Repetitive Sequences, Nucleic Acid ; *Sequence Analysis, DNA ; Superoxide Dismutase/genetics ; Thermus/chemistry/genetics ; Ultraviolet Rays
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
    Published by American Association for the Advancement of Science (AAAS)
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  • 10
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    Hepatitis C viral dynamics in vivo and the antiviral efficacy of interferon-alpha therapy (1998)
    American Association for the Advancement of Science (AAAS)
    Details
    Publication Date: 1998-10-02
    Description: To better understand the dynamics of hepatitis C virus and the antiviral effect of interferon-alpha-2b (IFN), viral decline in 23 patients during therapy was analyzed with a mathematical model. The analysis indicates that the major initial effect of IFN is to block virion production or release, with blocking efficacies of 81, 95, and 96% for daily doses of 5, 10, and 15 million international units, respectively. The estimated virion half-life (t1/2) was, on average, 2.7 hours, with pretreatment production and clearance of 10(12) virions per day. The estimated infected cell death rate exhibited large interpatient variation (corresponding t1/2 = 1.7 to 70 days), was inversely correlated with baseline viral load, and was positively correlated with alanine aminotransferase levels. Fast death rates were predictive of virus being undetectable by polymerase chain reaction at 3 months. These findings show that infection with hepatitis C virus is highly dynamic and that early monitoring of viral load can help guide therapy.〈br /〉〈span class="detail_caption"〉Notes: 〈/span〉Neumann, A U -- Lam, N P -- Dahari, H -- Gretch, D R -- Wiley, T E -- Layden, T J -- Perelson, A S -- A1/DK41320-2/DK/NIDDK NIH HHS/ -- A139049-2/PHS HHS/ -- RR06555/RR/NCRR NIH HHS/ -- New York, N.Y. -- Science. 1998 Oct 2;282(5386):103-7.〈br /〉〈span class="detail_caption"〉Author address: 〈/span〉Department of Life Sciences, Bar-Ilan University, Ramat-Gan 52900, Israel.〈br /〉〈span class="detail_caption"〉Record origin:〈/span〉 〈a href="http://www.ncbi.nlm.nih.gov/pubmed/9756471" target="_blank"〉PubMed〈/a〉
    Keywords: Alanine Transaminase/blood ; Antiviral Agents/administration & dosage/*therapeutic use ; Cell Death ; Dose-Response Relationship, Drug ; Half-Life ; Hepacivirus/*physiology ; Hepatitis C/immunology/*therapy/*virology ; Humans ; Interferon-alpha/administration & dosage/*therapeutic use ; Kinetics ; Models, Biological ; RNA, Viral/blood ; Recombinant Proteins ; Regression Analysis ; Viral Load ; Viremia/virology ; Virion/physiology ; Virus Replication
    Print ISSN: 0036-8075
    Electronic ISSN: 1095-9203
    Topics: Biology , Chemistry and Pharmacology , Computer Science , Medicine , Natural Sciences in General , Physics
    Published by American Association for the Advancement of Science (AAAS)
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