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  • 1
    Publication Date: 2023-03-27
    Description: Pteropods are a group of holoplanktonic gastropods for which global biomass distribution patterns remain poorly resolved. The aim of this study was to collect and synthesize existing pteropod (Gymnosomata, Thecosomata and Pseudothecosomata) abundance and biomass data, in order to evaluate the global distribution of pteropod carbon biomass, with a particular emphasis on its seasonal, temporal and vertical patterns. We collected 25 902 data points from several online databases and a number of scientific articles. The biomass data has been gridded onto a 360 x 180° grid, with a vertical resolution of 33 WOA depth levels. Data has been converted to NetCDF format. Data were collected between 1951-2010, with sampling depths ranging from 0-1000 m. Pteropod biomass data was either extracted directly or derived through converting abundance to biomass with pteropod specific length to weight conversions. In the Northern Hemisphere (NH) the data were distributed evenly throughout the year, whereas sampling in the Southern Hemisphere was biased towards the austral summer months. 86% of all biomass values were located in the NH, most (42%) within the latitudinal band of 30-50° N. The range of global biomass values spanned over three orders of magnitude, with a mean and median biomass concentration of 8.2 mg C l-1 (SD = 61.4) and 0.25 mg C l-1, respectively for all data points, and with a mean of 9.1 mg C l-1 (SD = 64.8) and a median of 0.25 mg C l-1 for non-zero biomass values. The highest mean and median biomass concentrations were located in the NH between 40-50° S (mean biomass: 68.8 mg C l-1 (SD = 213.4) median biomass: 2.5 mg C l-1) while, in the SH, they were within the 70-80° S latitudinal band (mean: 10.5 mg C l-1 (SD = 38.8) and median: 0.2 mg C l-1). Biomass values were lowest in the equatorial regions. A broad range of biomass concentrations was observed at all depths, with the biomass peak located in the surface layer (0-25 m) and values generally decreasing with depth. However, biomass peaks were located at different depths in different ocean basins: 0-25 m depth in the N Atlantic, 50-100 m in the Pacific, 100-200 m in the Arctic, 200-500 m in the Brazilian region and 〉500 m in the Indo-Pacific region. Biomass in the NH was relatively invariant over the seasonal cycle, but more seasonally variable in the SH. The collected database provides a valuable tool for modellers for the study of ecosystem processes and global biogeochemical cycles.
    Keywords: MAREMIP; MARine Ecosystem Model Intercomparison Project
    Type: Dataset
    Format: application/zip, 2.2 MBytes
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  • 2
    Publication Date: 2023-03-27
    Description: The planktonic haptophyte Phaeocystis has been suggested to play a fundamental role in the global biogeochemical cycling of carbon and sulphur, but little is known about its global biomass distribution. We have collected global microscopy data of the genus Phaeocystis and converted abundance data to carbon biomass using species-specific carbon conversion factors. Microscopic counts of single-celled and colonial Phaeocystis were obtained both through the mining of online databases and by accepting direct submissions (both published and unpublished) from Phaeocystis specialists. We recorded abundance data from a total of 1595 depth-resolved stations sampled between 1955-2009. The quality-controlled dataset includes 5057 counts of individual Phaeocystis cells resolved to species level and information regarding life-stages from 3526 samples. 83% of stations were located in the Northern Hemisphere while 17% were located in the Southern Hemisphere. Most data were located in the latitude range of 50-70° N. While the seasonal distribution of Northern Hemisphere data was well-balanced, Southern Hemisphere data was biased towards summer months. Mean species- and form-specific cell diameters were determined from previously published studies. Cell diameters were used to calculate the cellular biovolume of Phaeocystis cells, assuming spherical geometry. Cell biomass was calculated using a carbon conversion factor for Prymnesiophytes (Menden-Deuer and Lessard, 2000). For colonies, the number of cells per colony was derived from the colony volume. Cell numbers were then converted to carbon concentrations. An estimation of colonial mucus carbon was included a posteriori, assuming a mean colony size for each species. Carbon content per cell ranged from 9 pg (single-celled Phaeocystis antarctica) to 29 pg (colonial Phaeocystis globosa). Non-zero Phaeocystis cell biomasses (without mucus carbon) range from 2.9 - 10?5 µg l-1 to 5.4 - 103 µg l-1, with a mean of 45.7 µg l-1 and a median of 3.0 µg l-1. Highest biomasses occur in the Southern Ocean below 70° S (up to 783.9 µg l-1), and in the North Atlantic around 50° N (up to 5.4 - 103 µg l-1).
    Keywords: MAREMIP; MARine Ecosystem Model Intercomparison Project
    Type: Dataset
    Format: application/zip, 3.6 MBytes
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  • 3
    Publication Date: 2023-03-27
    Description: Coccolithophores are calcifying marine phytoplankton of the class Prymnesiophyceae. They are considered to play an import role in the global carbon cycle through the production and export of organic carbon and calcite. We have compiled observations of global coccolithophore abundance from several existing databases as well as individual contributions of published and unpublished datasets. We estimate carbon biomass using standardised conversion methods and provide estimates of uncertainty associated with these values. The database contains 58 384 individual observations at various taxonomic levels. This corresponds to 12 391 observations of total coccolithophore abundance and biomass. The data span a time period of 1929-2008, with observations from all ocean basins and all seasons, and at depths ranging from the surface to 500 m. Highest biomass values are reported in the North Atlantic, with a maximum of 501.7 ?gCl-1. Lower values are reported for the Pacific (maximum of 79.4 ?gCl-1) and Indian Ocean (up to 178.3 ?gCl-1). Coccolithophores are reported across all latitudes in the Northern Hemisphere, from the Equator to 89degN, although biomass values fall below 3 ?gCl-1 north of 70degN. In the Southern Hemisphere, biomass values fall rapidly south of 50degS, with only a single non-zero observation south of 60degS. Biomass values show a clear seasonal cycle in the Northern Hemisphere, reaching a maximum in the summer months (June-July). In the Southern Hemisphere the seasonal cycle is less evident, possibly due to a greater proportion of low-latitude data.
    Keywords: MAREMIP; MARine Ecosystem Model Intercomparison Project
    Type: Dataset
    Format: application/zip, 13 MBytes
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  • 4
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    PANGAEA
    In:  Supplement to: Brun, Philipp; Vogt, Meike; Payne, Mark R; Gruber, Nicolas; O'Brien, Colleen J; Buitenhuis, Erik Theodoor; Le Quéré, Corinne; Leblanc, Karine; Luo, Ya-Wei (2015): Ecological niches of open ocean phytoplankton taxa. Limnology and Oceanography, 60(3), 1020-1038, https://doi.org/10.1002/lno.10074
    Publication Date: 2023-05-12
    Description: This data contains realized ecological niche estimates of phytoplankton taxa within the mixed layer of the open ocean. The estimates are based on data from the MARine Ecosystem DATa (MAREDAT) initiative, and cover five phytoplankton functional types: coccolithophores (40 species), diatoms (87 species), diazotrophs (two genera), Phaeocystis (two species) and picophytoplankton (two genera). Considered as major niche dimensions were temperature (°C), mixed layer depth (MLD; m), nitrate concentration (µmoles/L), mean photosynthetically active radiation in the mixed layer (MLPAR; µmoles/m**2/s), salinity, and the excess of phosphate versus nitrate relative to the Redfield ratio (P*; µmoles/L). For each niche dimension at a time, conditions at presence locations of the taxa were contrasted with conditions in 12 000 randomly sampled points from the open ocean using MaxEnt models. We used the quartiles of the response curves of these models to parameterize realized niche centers and niche breadths: the median (q50) of the response curves was considered to be the niche center and the distance between the lower quartile (q25) and the upper quartile (q75) was used as a rough estimate of niche breadth. We only reported meaningful niche estimates, i.e., estimates based on MaxEnt models that perform significantly better than random, as indicated by an area under the curve (AUC) score significantly larger than 0.5.
    Type: Dataset
    Format: application/zip, 14.2 kBytes
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  • 5
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