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  • 1
    Publication Date: 2024-03-15
    Description: The effects of ocean acidification on ecosystems remain poorly understood, because it is difficult to simulate the effects of elevated CO2 on entire marine communities. Natural systems enriched in CO2 are being used to help understand the long-term effects of ocean acidification in situ. Here, we compared biofilm bacterial communities on intertidal cobbles/boulders and bedrock along a seawater CO2 gradient off Japan. Samples sequenced for 16S rRNA showed differences in bacterial communities with different pCO2 and between habitat types. In both habitats, bacterial diversity increased in the acidified conditions. Differences in pCO2 were associated with differences in the relative abundance of the dominant phyla. However, despite the differences in community composition, there was no indication that these changes would be significant for nutrient cycling and ecosystem function. As well as direct effects of seawater chemistry on the biofilm, increased microalgal growth and decreased grazing may contribute to the shift in bacterial composition at high CO2, as documented by other studies. Thus, the effects of changes in bacterial community composition due to globally increasing pCO2 levels require further investigation to assess the implications for marine ecosystem function. However, the apparent lack of functional shifts in biofilms along the pCO2 gradient is a reassuring indicator of stability of their ecosystem functions in shallow ocean margins.
    Keywords: ACE richness; Alkalinity, total; Aragonite saturation state; Benthos; Bicarbonate ion; Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Chao 1 richness; CO2 vent; Coast and continental shelf; Community composition and diversity; Entire community; EXP; Experiment; Field observation; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Group; LATITUDE; LONGITUDE; North Pacific; OA-ICC; Ocean Acidification International Coordination Centre; Oxygen, dissolved; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; Potentiometric; Potentiometric titration; Rocky-shore community; Salinity; Shannon Diversity Index; Shikine_Island; Simpson index of diversity; Site; Species richness; Temperate; Temperature, water; Type
    Type: Dataset
    Format: text/tab-separated-values, 864 data points
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  • 2
    Publication Date: 2024-03-22
    Description: Global climate change leads to simultaneous changes in multiple environmental drivers in the marine realm. Although physiological characterization of coccolithophores has been studied under climate change, there is limited knowledge on the biochemical responses of this biogeochemically important phytoplankton group to changing multiple environmental drivers. Here, we investigate the interactive effects of reduced phosphorus availability (4 to 0.4 µmol L−1), elevated pCO2 concentrations (426 to 946 µatm), and increasing light intensity (40 to 300 µmol photons m−2 s−1) on elemental content and macromolecules of the cosmopolitan coccolithophore Emiliania huxleyi. Reduced phosphorus availability reduces particulate organic nitrogen (PON) and protein contents per cell under 40 µmol photons m−2 s−1 but not under 300 µmol photons m−2 s−1. Reduced phosphorus availability and elevated pCO2 concentrations act synergistically to increase particulate organic carbon (POC) and carbohydrate contents per cell under 300 µmol photons m−2 s−1 but not under 40 µmol photons m−2 s−1. Reduced phosphorus availability, elevated pCO2 concentrations, and increasing light intensity act synergistically to increase the allocation of POC to carbohydrates. Under elevated pCO2 concentrations and increasing light intensity, enhanced carbon fixation could increase carbon storage in the phosphorus-limited regions of the oceans where E. huxleyi dominates the phytoplankton assemblages. In each type of light intensity, elemental-carbon-to-phosphorus (C:P) and nitrogen-to-phosphorus (N:P) ratios decrease with increasing growth rate. These results suggest that coccolithophores could reallocate chemical elements and energy to synthesize macromolecules efficiently, which allows them to regulate their elemental content and growth rate to acclimate to changing environmental conditions.
    Keywords: Alkalinity, total; Alkalinity, total, standard deviation; Aragonite saturation state; Bicarbonate ion; Bicarbonate ion, standard deviation; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbohydrates, per cell; Carbohydrates, per cell, standard deviation; Carbon, inorganic, dissolved; Carbon, inorganic, dissolved, standard deviation; Carbon, inorganic, particulate, per cell; Carbon, organic, particulate, per cell; Carbon, organic, particulate, standard deviation; Carbon, organic, particulate/Nitrogen, organic, particulate ratio; Carbon, organic, particulate/Nitrogen, organic, particulate ratio, standard deviation; Carbon, organic, particulate/Phosphorus, organic, particulate ratio; Carbon, organic, particulate/Phosphorus, organic, particulate ratio, standard deviation; Carbonate ion; Carbonate ion, standard deviation; Carbonate system computation flag; Carbon dioxide; Chromista; Emiliania huxleyi; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Growth rate; Growth rate, standard deviation; Haptophyta; Laboratory experiment; Laboratory strains; Light; Macro-nutrients; Nitrogen, organic, particulate, per cell; Nitrogen, organic, particulate/Phosphorus, organic, particulate ratio; Nitrogen, organic, particulate/Phosphorus, organic, particulate ratio, standard deviation; Not applicable; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Particulate inorganic carbon/particulate organic carbon ratio; Particulate inorganic carbon/particulate organic carbon ratio, standard deviation; Particulate inorganic carbon per cell, standard deviation; Particulate organic nitrogen per cell, standard deviation; Pelagos; Percentage; Percentage, standard deviation; pH; pH, standard deviation; Phosphorus, inorganic, dissolved; Phosphorus, inorganic, dissolved, standard deviation; Phosphorus, organic, particulate, per cell; Phosphorus, organic, particulate, per cell, standard deviation; Phytoplankton; Potentiometric titration; Protein per cell; Proteins, standard deviation; Salinity; Single species; Species, unique identification; Species, unique identification (Semantic URI); Species, unique identification (URI); Spectrophotometric; Temperature, water; Treatment; Type of study
    Type: Dataset
    Format: text/tab-separated-values, 460 data points
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  • 3
    Publication Date: 2024-03-15
    Description: The rise of atmospheric pCO2 has created a number of problems for marine ecosystem. In this study, we initially quantified the effects of elevated pCO2 on the group-specific mortality of phytoplankton in a natural community based on the results of mesocosm experiments. Diatoms dominated the phytoplankton community, and the concentration of chlorophyll a was significantly higher in the high-pCO2 treatment than the low-pCO2 treatment. Phytoplankton mortality (percentage of dead cells) decreased during the exponential growth phase. Although the mortality of dinoflagellates did not differ significantly between the two pCO2 treatments, that of diatoms was lower in the high-pCO2 treatment. Small diatoms dominated the diatom community. Although the mortality of large diatoms did not differ significantly between the two treatments, that of small diatoms was lower in the high-pCO2 treatment. These results suggested that elevated pCO2 might enhance dominance by small diatoms and thereby change the community structure of coastal ecosystems.
    Keywords: Abundance; Abundance per volume; Alkalinity, total; Ammonium; Aragonite saturation state; Bicarbonate ion; Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Cell size, standard deviation; Chlorophyll a; Coast and continental shelf; Community composition and diversity; Day of experiment; Entire community; EXP; Experiment; Fucoxanthin; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Identification; Laboratory experiment; Mesocosm or benthocosm; Mortality; Mortality/Survival; Nitrate and Nitrite; Nitrite; North Pacific; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; Peridinin; pH; Phosphate; Salinity; Sampling date; Signal; Silicate; Spectrophotometric; Temperate; Temperature, water; Treatment; Type; Wuyuan_Bay_OA
    Type: Dataset
    Format: text/tab-separated-values, 7366 data points
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  • 4
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    PANGAEA
    In:  Supplement to: Lin, Xin; Huang, Ruiping; Li, Yan; Li, Futian; Wu, YaPing; Hutchins, David A; Dai, Minhan; Gao, Kunshan (2018): Interactive network configuration maintains bacterioplankton community structure under elevated CO2 in a eutrophic coastal mesocosm experiment. Biogeosciences, 15(2), 551-565, https://doi.org/10.5194/bg-15-551-2018
    Publication Date: 2024-05-22
    Description: There is increasing concern about the effects of ocean acidification on marine biogeochemical and ecological processes and the organisms that drive them, including marine bacteria. Here, we examine the effects of elevated CO2 on the bacterioplankton community during a mesocosm experiment using an artificial phytoplankton community in subtropical, eutrophic coastal waters of Xiamen, southern China. Through sequencing the bacterial 16S rRNA gene V3-V4 region, we found that the bacterioplankton community in this high-nutrient coastal environment was relatively resilient to changes in seawater carbonate chemistry. Based on comparative ecological network analysis, we found that elevated CO2 hardly altered the network structure of high-abundance bacterioplankton taxa but appeared to reassemble the community network of low abundance taxa. This led to relatively high resilience of the whole bacterioplankton community to the elevated CO2 level and associated chemical changes. We also observed that the Flavobacteria group, which plays an important role in the microbial carbon pump, showed higher relative abundance under the elevated CO2 condition during the early stage of the phytoplankton bloom in the mesocosms. Our results provide new insights into how elevated CO2 may influence bacterioplankton community structure.
    Keywords: Abundance; Alkalinity, total; Aragonite saturation state; Bicarbonate ion; Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Class; Coast and continental shelf; Community composition and diversity; Entire community; EXP; Experiment; Family; Field experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Genus; Mesocosm or benthocosm; North Pacific; OA-ICC; Ocean Acidification International Coordination Centre; Order; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; Phosphate; Phylum; Salinity; Silicate; Temperate; Temperature, water; Treatment; Type; Wuyuan_Bay
    Type: Dataset
    Format: text/tab-separated-values, 149239 data points
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  • 5
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    PANGAEA
    In:  Supplement to: Liu, Nana; Tong, Shanying; Yi, Xiangqi; Li, Yan; Li, Zhenzhen; Miao, Hangbin; Wang, Tifeng; Li, Futian; Yan, Dong; Huang, Ruiping; Wu, YaPing; Hutchins, David A; Beardall, John; Dai, Minhan; Gao, Kunshan (2017): Carbon assimilation and losses during an ocean acidification mesocosm experiment, with special reference to algal blooms. Marine Environmental Research, 129, 229-235, https://doi.org/10.1016/j.marenvres.2017.05.003
    Publication Date: 2024-05-22
    Description: A mesocosm experiment was conducted in Wuyuan Bay (Xiamen), China, to investigate the effects of elevated pCO2 on bloom formation by phytoplankton species previously studied in laboratory-based ocean acidification experiments, to determine if the indoor-grown species performed similarly in mesocosms under more realistic environmental conditions. We measured biomass, primary productivity and particulate organic carbon (POC) as well as particulate organic nitrogen (PON). Phaeodactylum tricornutum outcompeted Thalassiosira weissflogii and Emiliania huxleyi, comprising more than 99% of the final biomass. Mainly through a capacity to tolerate nutrient-limited situations, P. tricornutum showed a powerful sustained presence during the plateau phase of growth. Significant differences between high and low CO2 treatments were found in cell concentration, cumulative primary productivity and POC in the plateau phase but not during the exponential phase of growth. Compared to the low pCO2 (LC) treatment, POC increased by 45.8–101.9% in the high pCO2 (HC) treated cells during the bloom period. Furthermore, respiratory carbon losses of gross primary productivity were found to comprise 39–64% for the LC and 31–41% for the HC mesocosms (daytime C fixation) in phase II. Our results suggest that the duration and characteristics of a diatom bloom can be affected by elevated pCO2. Effects of elevated pCO2 observed in the laboratory cannot be reliably extrapolated to large scale mesocosms with multiple influencing factors, especially during intense algal blooms.
    Keywords: Alkalinity, total; Aragonite saturation state; Bicarbonate ion; Biomass/Abundance/Elemental composition; Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbon, organic, particulate; Carbon, organic, particulate/Nitrogen, organic, particulate ratio; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Cell density; Chlorophyll a; Coast and continental shelf; Community composition and diversity; Day of experiment; Entire community; EXP; Experiment; Field experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Mesocosm or benthocosm; Nitrogen, organic, particulate; North Pacific; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; Phosphate; Primary production/Photosynthesis; Primary production of carbon per day; Registration number of species; Replicate; Respiration rate, carbon dioxide; Salinity; Silicate; Species; Temperate; Temperature, water; Treatment; Type; Uniform resource locator/link to reference; Wuyuan_Bay
    Type: Dataset
    Format: text/tab-separated-values, 12180 data points
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  • 6
    Publication Date: 2024-05-22
    Description: Eutrophic coastal regions are highly productive and greatly influenced by human activities. Primary production supporting the coastal ecosystems is supposed to be affected by progressive ocean acidification driven by increasing CO2 emissions. In order to investigate the effects of high pCO2 (HC) on eutrophic plankton community structure and ecological functions, we employed 9 mesocosms and carried out an experiment under ambient (410 ppmv) and future high (1000 ppmv) atmospheric pCO2 conditions, using in situ plankton community in Wuyuan Bay, East China Sea. Our results showed that HC along with natural seawater temperature rise significantly boosted biomass of diatoms with decreased abundance of dinoflagellates in the late stage of the experiment, demonstrating that HC repressed the succession from diatoms to dinoflagellates, a phenomenon observed during algal blooms in the East China Sea. HC did not significantly influence the primary production or biogenic silica contents of the phytoplankton assemblages. However, the HC treatments increased the abundance of viruses and heterotrophic bacteria, reflecting a refueling of nutrients for phytoplankton growth from virus-mediated cell lysis and bacterial degradation of organic matters. Conclusively, our results suggest that increasing CO2 concentrations can modulate plankton structure including the succession of phytoplankton community and the abundance of viruses and bacteria in eutrophic coastal waters, which may lead to altered biogeochemical cycles of carbon and nutrients.
    Keywords: Ammonium; Aragonite saturation state; Bacteria; Bicarbonate ion; Biogenic silica; Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Cell density; Chlorophyll a; Coast and continental shelf; Community composition and diversity; Day of experiment; Entire community; EXP; Experiment; Field experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Mesocosm or benthocosm; Night period respiration, carbon; Nitrate; Nitrite; North Pacific; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; Phosphate; Primary production, carbon assimilation; Primary production/Photosynthesis; Replicates; Respiration; Salinity; Silicate; Temperate; Temperature, water; Treatment; Type; Viral abundance; Wuyuan_Bay_OA
    Type: Dataset
    Format: text/tab-separated-values, 6225 data points
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  • 7
  • 8
  • 9
  • 10
    Publication Date: 2013-04-09
    Print ISSN: 0724-8741
    Electronic ISSN: 1573-904X
    Topics: Chemistry and Pharmacology
    Published by Springer
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