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  • 1
    facet.materialart.
    Unknown
    PANGAEA
    In:  Supplement to: Edmunds, Peter J; Cumbo, Vivian R; Fan, Tung-Yung (2013): Metabolic costs of larval settlement and metamorphosis in the coral Seriatopora caliendrum under ambient and elevated pCO2. Journal of Experimental Marine Biology and Ecology, 443, 33-38, https://doi.org/10.1016/j.jembe.2013.02.032
    Publication Date: 2024-03-15
    Description: We tested the effects of pCO2 on Seriatopora caliendrum recruits over the first 5.3 d of post-settlement existence. In March 2011, 11-20 larvae were settled in glass vials (3.2 mL) and incubated at 24.0 °C and ~250 µmol quanta/m**2/s while supplied with seawater (at 1.4 mL/s) equilibrated with 51.6 Pa pCO2 (ambient) or 86.4 Pa pCO2. At 51.6 Pa pCO2, mean respiration 7 h post-settlement was 0.056 ± 0.007 nmol O2/recruit/min, but rose quickly to 0.095 ± 0.007 nmol O2/recruit/min at 3.3 d post-settlement, and thereafter declined to 0.075 ± 0.002 nmol O2/recruit/min at 5.3 d post-settlement (all ± SE). Elevated pCO2 depressed respiration of recruits by 19% after 3.3 d and 12% overall (i.e., integrated over 5.3 d), and while it had no effect on corallite area, elevated pCO2 was associated with weaker adhesion to the glass settlement surface and lower protein biomass. The unique costs of settlement and metamorphosis for S. caliendrum over 5.3 d are estimated to be 257 mJ/recruit at 51.6 Pa pCO2, which is less than the energy content of the larvae and recruits.
    Keywords: Alkalinity, total; Alkalinity, total, standard deviation; Animalia; Aragonite saturation state; Area of spat; Bicarbonate ion; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Cnidaria; Coast and continental shelf; Duration; EXP; Experiment; Figure; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Irradiance; Irradiance, standard deviation; Laboratory experiment; Nanwan_Bay; North Pacific; Number; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide, standard deviation; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; Protein content; Respiration; Respiration rate, oxygen, per spat; Salinity; Seriatopora caliendrum; Single species; Species; Temperature, water; Treatment; Tropical; Zooplankton
    Type: Dataset
    Format: text/tab-separated-values, 2089 data points
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  • 2
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    Unknown
    PANGAEA
    In:  Supplement to: Cumbo, Vivian R; Fan, Tung-Yung; Edmunds, Peter J (2013): Effects of exposure duration on the response of Pocillopora damicornis larvae to elevated temperature and high pCO2. Journal of Experimental Marine Biology and Ecology, 439, 100-107, https://doi.org/10.1016/j.jembe.2012.10.019
    Publication Date: 2024-03-15
    Description: Efforts to evaluate the response of coral larvae to global climate change (GCC) and ocean acidification (OA) typically employ short experiments of fixed length, yet it is unknown how the response is affected by exposure duration. In this study, we exposed larvae from the brooding coral Pocillopora damicornis to contrasts of temperature (24.00 °C [ambient] versus 30.49 °C) and pCO2 (49.4 Pa versus 86.2 Pa) for varying periods (1-5 days) to test the hypothesis that exposure duration had no effect on larval response as assessed by protein content, respiration, Symbiodinium density, and survivorship; exposure times were ecologically relevant compared to representative pelagic larval durations (PLD) for corals. Larvae differed among days for all response variables, and the effects of the treatment were relatively consistent regardless of exposure duration for three of the four response variables. Protein content and Symbiodinium density were unaffected by temperature and pCO2, but respiration increased with temperature (but not pCO2) with the effect intensifying as incubations lengthened. Survival, however, differed significantly among treatments at the end of the study, and by the 5th day, 78% of the larvae were alive and swimming under ambient temperature and ambient pCO2, but only 55-59% were alive in the other treatments. These results demonstrate that the physiological effects of temperature and pCO2 on coral larvae can reliably be detected within days, but effects on survival require 〉 or = 5 days to detect. The detection of time-dependent effects on larval survivorship suggests that the influence of GCC and OA will be stronger for corals having long PLDs.
    Keywords: Alkalinity, total; Alkalinity, total, standard error; Animalia; Aragonite saturation state; Bicarbonate ion; Biomass/Abundance/Elemental composition; Calcite saturation state; Calculated; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Cnidaria; Coast and continental shelf; Containers and aquaria (20-1000 L or 〈 1 m**2); Date; EXP; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Incubation duration; Irradiance; Irradiance, standard error; Laboratory experiment; Mortality; Mortality/Survival; Nanwan_Bay; North Pacific; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard error; Pelagos; pH; Pocillopora damicornis; Proteins per individual; Replicate; RESP; Respiration; Respiration rate, oxygen, per protein; Respirometer; Salinity; Sample code/label; Single species; Species; Spectrophotometric; Symbiont cell density; Temperate; Temperature; Temperature, water; Temperature, water, standard error; Treatment; Zooplankton
    Type: Dataset
    Format: text/tab-separated-values, 5823 data points
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  • 3
    facet.materialart.
    Unknown
    PANGAEA
    In:  Supplement to: Dufault, Aaron M; Cumbo, Vivian R; Fan, Tung-Yung; Edmunds, Peter J (2012): Effects of diurnally oscillating pCO2 on the calcification and survival of coral recruits. Proceedings of the Royal Society B-Biological Sciences, 279(1740), 2951-2958, https://doi.org/10.1098/rspb.2011.2545
    Publication Date: 2024-03-15
    Description: Manipulative studies have demonstrated that ocean acidification (OA) is a threat to coral reefs, yet no experiments have employed diurnal variations in pCO2 that are ecologically relevant to many shallow reefs. Two experiments were conducted to test the response of coral recruits (less than 6 days old) to diurnally oscillating pCO2; one exposing recruits for 3 days to ambient (440 µatm), high (663 µatm) and diurnally oscillating pCO2 on a natural phase (420-596 µatm), and another exposing recruits for 6 days to ambient (456 µatm), high (837 µatm) and diurnally oscillating pCO2 on either a natural or a reverse phase (448-845 µatm). In experiment I, recruits exposed to natural-phased diurnally oscillating pCO2 grew 6-19% larger than those in ambient or high pCO2. In experiment II, recruits in both high and natural-phased diurnally oscillating pCO2 grew 16 per cent larger than those at ambient pCO2, and this was accompanied by 13-18% higher survivorship; the stimulatory effect on growth of oscillatory pCO2 was diminished by administering high pCO2 during the day (i.e. reverse-phased). These results demonstrate that coral recruits can benefit from ecologically relevant fluctuations in pCO2 and we hypothesize that the mechanism underlying this response is highly pCO2-mediated, night-time storage of dissolved inorganic carbon that fuels daytime calcification.
    Keywords: Alkalinity, total; Animalia; Aragonite saturation state; Benthic animals; Benthos; Bicarbonate ion; Bottles or small containers/Aquaria (〈20 L); Calcification/Dissolution; Calcification rate; Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Cnidaria; Coast and continental shelf; EXP; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Growth rate; Identification; Incubation duration; Laboratory experiment; Mortality/Survival; Nanwan_Bay; North Pacific; Number of individuals; OA-ICC; Ocean Acidification International Coordination Centre; Other; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); pH; Polyp number; Replicate; Salinity; Seriatopora caliendrum; Single species; Species; Temperature, water; Treatment; Tropical
    Type: Dataset
    Format: text/tab-separated-values, 17148 data points
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  • 4
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    PANGAEA
    In:  Supplement to: Cumbo, Vivian R; Edmunds, Peter J; Wall, Christopher B; Fan, Tung-Yung (2013): Brooded coral larvae differ in their response to high temperature and elevated pCO2 depending on the day of release. Marine Biology, 160(11), 2903-2917, https://doi.org/10.1007/s00227-013-2280-y
    Publication Date: 2024-03-15
    Description: To evaluate the effects of temperature and pCO2 on coral larvae, brooded larvae of Pocillopora damicornis from Nanwan Bay, Taiwan (21°56.179' N, 120°44.85' E), were exposed to ambient (419-470 µatm) and high (604-742 µatm) pCO2 at ~25 and ~29 °C in two experiments conducted in March 2010 and March 2012. Larvae were sampled from four consecutive lunar days (LD) synchronized with spawning following the new moon, incubated in treatments for 24 h, and measured for respiration, maximum photochemical efficiency of PSII (F v/F m), and mortality. The most striking outcome was a strong effect of time (i.e., LD) on larvae performance: respiration was affected by an LD × temperature interaction in 2010 and 2012, as well as an LD × pCO2 × temperature interaction in 2012; F v/F m was affected by LD in 2010 (but not 2012); and mortality was affected by an LD × pCO2 interaction in 2010, and an LD × temperature interaction in 2012. There were no main effects of pCO2 in 2010, but in 2012, high pCO2 depressed metabolic rate and reduced mortality. Therefore, differences in larval performance depended on day of release and resulted in varying susceptibility to future predicted environmental conditions. These results underscore the importance of considering larval brood variation across days when designing experiments. Subtle differences in experimental outcomes between years suggest that transgenerational plasticity in combination with unique histories of exposure to physical conditions can modulate the response of brooded coral larvae to climate change and ocean acidification.
    Keywords: Alkalinity, total; Animalia; Aragonite saturation state; Bicarbonate ion; Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Cnidaria; Coast and continental shelf; Containers and aquaria (20-1000 L or 〈 1 m**2); Date; Duration, number of days; EXP; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Identification; Laboratory experiment; Maximum photochemical quantum yield of photosystem II; Mortality; Mortality/Survival; Nanwan_Bay; North Pacific; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Pelagos; pH; Pocillopora damicornis; Potentiometric; Potentiometric titration; Primary production/Photosynthesis; Replicates; Respiration; Respiration rate, oxygen, per individual; Salinity; Single species; Species; Temperature; Temperature, water; Treatment; Tropical; Zooplankton
    Type: Dataset
    Format: text/tab-separated-values, 5960 data points
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  • 5
    facet.materialart.
    Unknown
    PANGAEA
    In:  Supplement to: Wall, Christopher B; Fan, Tung-Yung; Edmunds, Peter J (2013): Ocean acidification has no effect on thermal bleaching in the coral Seriatopora caliendrum. Coral Reefs, 33(1), 119-130, https://doi.org/10.1007/s00338-013-1085-2
    Publication Date: 2024-03-15
    Description: The objective of this study was to test whether elevated pCO2 predicted for the year 2100 (85.1 Pa) affects bleaching in the coral Seriatopora caliendrum (Ehrenberg 1834) either independently or interactively with high temperature (30.5 °C). Response variables detected the sequence of events associated with the onset of bleaching: reduction in the photosynthetic performance of symbionts as measured by maximum photochemical efficiency (F v/F m) and effective photochemical efficiency (delta F/F m') of PSII, declines in net photosynthesis (P net) and photosynthetic efficiency (alpha), and finally, reduced chlorophyll a and symbiont concentrations. S. caliendrum was collected from Nanwan Bay, Taiwan, and subjected to combinations of temperature (27.7 vs. 30.5 °C) and pCO2 (45.1 vs. 85.1 Pa) for 14 days. High temperature reduced values of all dependent variables (i.e., bleaching occurred), but high pCO2 did not affect Symbiodinium photophysiology or productivity, and did not cause bleaching. These results suggest that short-term exposure to 81.5 Pa pCO2, alone and in combination with elevated temperature, does not cause or affect coral bleaching.
    Keywords: Alkalinity, total; Alkalinity, total, standard error; Animalia; Aragonite saturation state; Benthic animals; Benthos; Bicarbonate ion; Bicarbonate ion, standard error; Calcite saturation state; Calculated using CO2SYS; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate ion, standard error; Carbonate system computation flag; Carbon dioxide; Cell density; Chlorophyll a; Chlorophyll a per cell; Cnidaria; Coast and continental shelf; Containers and aquaria (20-1000 L or 〈 1 m**2); Effective quantum yield; EXP; Experiment; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Hobihu_Reef; Identification; Laboratory experiment; Maximum photochemical quantum yield of photosystem II; Net photosynthesis rate, oxygen; North Pacific; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard error; pH; Photosynthetic efficiency; Potentiometric titration; Primary production/Photosynthesis; Replicate; Respiration; Respiration rate, oxygen; Salinity; Seriatopora caliendrum; Single species; Species; Spectrophotometric; Surface area; Temperature; Temperature, water; Temperature, water, standard error; Tropical
    Type: Dataset
    Format: text/tab-separated-values, 1801 data points
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  • 6
    Publication Date: 2024-03-15
    Description: The success of early life-history stages is an environmentally sensitive bottleneck for many marine invertebrates. Responses of larvae to environmental stress may vary due to differences in maternal investment of energy stores and acclimatization/adaptation of a population to local environmental conditions. In this study, we compared two populations from sites with different environmental regimes (Moorea and Taiwan). We assessed the responses of Pocillopora damicornis larvae to two future co-occurring environmental stressors: elevated temperature and ocean acidification. Larvae from Taiwan were more sensitive to temperature, producing fewer energy-storage lipids under high temperature. In general, planulae in Moorea and Taiwan responded similarly to pCO2. Additionally, corals in the study sites with different environments produced larvae with different initial traits, which may have shaped the different physiological responses observed. Notably, under ambient conditions, planulae in Taiwan increased their stores of wax ester and triacylglycerol in general over the first 24 h of their dispersal, whereas planulae from Moorea consumed energy-storage lipids in all cases. Comparisons of physiological responses of P. damicornis larvae to conditions of ocean acidification and warming between sites across the species' biogeographic range illuminates the variety of physiological responses maintained within P. damicornis, which may enhance the overall persistence of this species in the light of global climate change.
    Keywords: Alkalinity, total; Alkalinity, total, standard error; Animalia; Aragonite saturation state; Area; Bicarbonate ion; Biomass/Abundance/Elemental composition; Bottles or small containers/Aquaria (〈20 L); Calcite saturation state; Calculated using seacarb after Nisumaa et al. (2010); Carbon, inorganic, dissolved; Carbonate ion; Carbonate system computation flag; Carbon dioxide; Cnidaria; Coast and continental shelf; Event label; EXP; Experiment; Experiment duration; Fugacity of carbon dioxide (water) at sea surface temperature (wet air); Growth/Morphology; Identification; Laboratory experiment; Length; Moorea_OA; North Pacific; OA-ICC; Ocean Acidification International Coordination Centre; Partial pressure of carbon dioxide (water) at sea surface temperature (wet air); Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard error; Pelagos; pH; pH, standard error; Pocillopora damicornis; Proportion; Registration number of species; Salinity; Salinity, standard error; Single species; Site; South Pacific; Species; Symbiont density per larvae; Taiwan; Temperature; Temperature, water; Temperature, water, standard error; Total lipid per larvae; Total proteins per larvae; Treatment; Tropical; Type; Uniform resource locator/link to reference; Zooplankton
    Type: Dataset
    Format: text/tab-separated-values, 6137 data points
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  • 7
    Publication Date: 2022-05-25
    Description: © The Author(s), 2018]. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Global Ecology and Biogeography 27 (2018): 760-786, doi:10.1111/geb.12729.
    Description: The BioTIME database contains raw data on species identities and abundances in ecological assemblages through time. These data enable users to calculate temporal trends in biodiversity within and amongst assemblages using a broad range of metrics. BioTIME is being developed as a community‐led open‐source database of biodiversity time series. Our goal is to accelerate and facilitate quantitative analysis of temporal patterns of biodiversity in the Anthropocene. The database contains 8,777,413 species abundance records, from assemblages consistently sampled for a minimum of 2 years, which need not necessarily be consecutive. In addition, the database contains metadata relating to sampling methodology and contextual information about each record. BioTIME is a global database of 547,161 unique sampling locations spanning the marine, freshwater and terrestrial realms. Grain size varies across datasets from 0.0000000158 km2 (158 cm2) to 100 km2 (1,000,000,000,000 cm2). BioTIME records span from 1874 to 2016. The minimal temporal grain across all datasets in BioTIME is a year. BioTIME includes data from 44,440 species across the plant and animal kingdoms, ranging from plants, plankton and terrestrial invertebrates to small and large vertebrates.
    Description: European Research Council and EU, Grant/Award Number: AdG‐250189, PoC‐727440 and ERC‐SyG‐2013‐610028; Natural Environmental Research Council, Grant/Award Number: NE/L002531/1; National Science Foundation, Grant/Award Number: DEB‐1237733, DEB‐1456729, 9714103, 0632263, 0856516, 1432277, DEB‐9705814, BSR‐8811902, DEB 9411973, DEB 0080538, DEB 0218039, DEB 0620910, DEB 0963447, DEB‐1546686, DEB‐129764, OCE 95‐21184, OCE‐ 0099226, OCE 03‐52343, OCE‐0623874, OCE‐1031061, OCE‐1336206 and DEB‐1354563; National Science Foundation (LTER) , Grant/Award Number: DEB‐1235828, DEB‐1440297, DBI‐0620409, DEB‐9910514, DEB‐1237517, OCE‐0417412, OCE‐1026851, OCE‐1236905, OCE‐1637396, DEB 1440409, DEB‐0832652, DEB‐0936498, DEB‐0620652, DEB‐1234162 and DEB‐0823293; Fundação para a Ciência e Tecnologia, Grant/Award Number: POPH/FSE SFRH/BD/90469/2012, SFRH/BD/84030/2012, PTDC/BIA‐BIC/111184/2009; SFRH/BD/80488/2011 and PD/BD/52597/2014; Ciência sem Fronteiras/CAPES, Grant/Award Number: 1091/13‐1; Instituto Milenio de Oceanografía, Grant/Award Number: IC120019; ARC Centre of Excellence, Grant/Award Number: CE0561432; NSERC Canada; CONICYT/FONDECYT, Grant/Award Number: 1160026, ICM PO5‐002, CONICYT/FONDECYT, 11110351, 1151094, 1070808 and 1130511; RSF, Grant/Award Number: 14‐50‐00029; Gordon and Betty Moore Foundation, Grant/Award Number: GBMF4563; Catalan Government; Marie Curie Individual Fellowship, Grant/Award Number: QLK5‐CT2002‐51518 and MERG‐CT‐2004‐022065; CNPq, Grant/Award Number: 306170/2015‐9, 475434/2010‐2, 403809/2012‐6 and 561897/2010; FAPESP (São Paulo Research Foundation), Grant/Award Number: 2015/10714‐6, 2015/06743‐0, 2008/10049‐9, 2013/50714‐0 and 1999/09635‐0 e 2013/50718‐5; EU CLIMOOR, Grant/Award Number: ENV4‐CT97‐0694; VULCAN, Grant/Award Number: EVK2‐CT‐2000‐00094; Spanish, Grant/Award Number: REN2000‐0278/CCI, REN2001‐003/GLO and CGL2016‐79835‐P; Catalan, Grant/Award Number: AGAUR SGR‐2014‐453 and SGR‐2017‐1005; DFG, Grant/Award Number: 120/10‐2; Polar Continental Shelf Program; CENPES – PETROBRAS; FAPERJ, Grant/Award Number: E‐26/110.114/2013; German Academic Exchange Service; sDiv; iDiv; New Zealand Department of Conservation; Wellcome Trust, Grant/Award Number: 105621/Z/14/Z; Smithsonian Atherton Seidell Fund; Botanic Gardens and Parks Authority; Research Council of Norway; Conselleria de Innovació, Hisenda i Economia; Yukon Government Herschel Island‐Qikiqtaruk Territorial Park; UK Natural Environment Research Council ShrubTundra Grant, Grant/Award Number: NE/M016323/1; IPY; Memorial University; ArcticNet. DOI: 10.13039/50110000027. Netherlands Organization for Scientific Research in the Tropics NWO, grant W84‐194. Ciências sem Fronteiras and Coordenação de Pessoal de Nível Superior (CAPES, Brazil), Grant/Award Number: 1091/13‐1. National Science foundation (LTER), Award Number: OCE‐9982105, OCE‐0620276, OCE‐1232779. FCT ‐ SFRH / BPD / 82259 / 2011. U.S. Fish and Wildlife Service/State Wildlife federal grant number T‐15. Australian Research Council Centre of Excellence for Coral Reef Studies (CE140100020). Australian Research Council Future Fellowship FT110100609. M.B., A.J., K.P., J.S. received financial support from internal funds of University of Lódź. NSF DEB 1353139. Catalan Government fellowships (DURSI): 1998FI‐00596, 2001BEAI200208, MECD Post‐doctoral fellowship EX2002‐0022. National Science Foundation Award OPP‐1440435. FONDECYT 1141037 and FONDAP 15150003 (IDEAL). CNPq Grant 306595‐2014‐1
    Repository Name: Woods Hole Open Access Server
    Type: Article
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  • 8
    Publication Date: 2022-05-26
    Description: Dataset: brooded coral larvae 3 - mortality
    Description: The physiological development of brooded larvae from the pocilloporid corals Pocillopora damicornis in southern Taiwan under elevated temperature and pCO2 was examined. These data include settling and mortality rates of brooded coral larvae at high and ambient temperature and pCO2 conducted in March 2011. These data were published in Cumbo et al, JEMBE, 2013. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/535462
    Description: NSF Division of Ocean Sciences (NSF OCE) OCE-0844785
    Repository Name: Woods Hole Open Access Server
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  • 9
    Publication Date: 2009-09-01
    Print ISSN: 0141-1136
    Electronic ISSN: 1879-0291
    Topics: Biology , Energy, Environment Protection, Nuclear Power Engineering , Geosciences
    Published by Elsevier
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  • 10
    Publication Date: 2020-05-26
    Electronic ISSN: 2045-2322
    Topics: Natural Sciences in General
    Published by Springer Nature
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