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  • 1
    ISSN: 1432-2242
    Keywords: Key words Oryza sativa L. ; Ratoon ; Molecular marker ; QTL
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Although F2s are the most informative populations for genetic analysis, it has been difficult to use F2 populations directly for QTL analysis because it is usually difficult to assess the reliability of the data, due to an inability to estimate the experimental errors. In this study, we performed a QTL analysis for yield and yield-component traits of an F2 population based on data from replicated field trials over 2 years using vegetative shoots of ratooned plants, making use of the ratooning habit of rice. The objective of this study was to explore the possibility of conducting QTL analyses directly based on an F2 population by means of ratooning plants. The experimental population was from a cross between ’Zhenshan 97’ and ’Minghui 63’, the parents of ’Shanyou 63’, an elite rice hybrid widely grown in China. A genetic linkage map containing 151 molecular markers was constructed for QTL mapping. A total of 20 distinct QTLs were detected; eight of these were detected in both years and remaining 12 in only 1 year. Compared with the results of our previous analysis of the F2:3 families from the same cross, it was shown that most of the QTLs detected in the ratooned F2 population were also detected in the F2:3 population. However, the estimates of both additive and dominant types of genetic effects for many of the QTLs based on F2 ratoons were substantially larger than those based on F2:3 families. The results indicate that vegetatively ratooned F2 populations may have considerable utility in the mapping of QTLs, especially if dominant types of gene actions are of concern, although there were certain technical limitations in making use of such populations in the experiments.
    Type of Medium: Electronic Resource
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  • 2
    Electronic Resource
    Electronic Resource
    Springer
    Theoretical and applied genetics 101 (2000), S. 823-829 
    ISSN: 1432-2242
    Keywords: Key words Rice quality ; Grain shape ; Endosperm opacity ; Genetic analysis ; Molecular marker
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  Appearance quality of the rice grain represents a major problem of rice production in many rice-producing areas of the world, especially in hybrid rice production in China. In this study, we conducted a molecular marker-based genetic analysis of the traits that are determinants of the appearance quality of rice grains, including traits specifying grain shape and endosperm opacity. The materials used in the analysis included an F2:3 population and an F10 recombinant inbred line population from a cross between the parents of Shanyou 63, the most widely grown rice hybrid in China. Molecular marker-based QTL (quantitative trait locus) analyses revealed that grain length and grain width were each controlled by a major QTL accounting for a very large proportion of the genetic variation, plus one or two minor QTLs each explaining a small proportion of the genetic variation. The major QTLs can be detected in both the F2:3 and recombinant inbred line population using both paddy rice and brown rice, whereas the minor QTLs were detected only occasionally. The QTL located in the interval of RG393-C1087 on chromosome 3 is the major locus for grain length, and the one in the interval RG360-C734a on chromosome 5 plays a major role in determining grain width. Similarly, white belly, which largely determines the opacity of the endosperm, is almost entirely controlled by a major locus on chromosome 5, located in the same genomic region as the major QTL for grain width. The implications of the results with respect to hybrid rice improvement were discussed.
    Type of Medium: Electronic Resource
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  • 3
    ISSN: 1432-2242
    Keywords: Key words Rice quality ; Amylose content ; Gel consistency ; Gelatinization temperature ; Genetic analysis ; Molecular marker
    Source: Springer Online Journal Archives 1860-2000
    Topics: Biology
    Notes: Abstract  The cooking and eating quality of the rice grain is one of the most serious problems in many rice-producing areas of the world. In this study, we conducted a molecular marker-based genetic analysis of three traits, amylose content (AC), gel consistency (GC) and gelatinization temperature (GT), that are the most important constituents of the cooking and eating quality of rice grains. The materials used in the analysis included F2 seeds, an F2:3 population, and an F9 recombinant inbred-line population from a cross between the parents of ’Shanyou 63’, the most widely grown hybrid in rice production in China. Segregation analyses of these three generations showed that each of the three traits was controlled by a single Mendelian locus. Molecular marker-based QTL (quantitative trait locus) analyses, both by one-way analysis of variance using single marker genotypes and by whole-genome scanning with MAPMAKER/QTL, revealed a single locus that controls the expression of all three traits. This locus coincided with the Wx region on the short arm of chromosome 6, indicating that all three traits were either controlled by the Wx locus or by a genomic region tightly linked to this locus. This finding has provided clues to resolving the molecular bases of GC and GT in future studies. The results also have direct implications for the quality improvement of rice varieties.
    Type of Medium: Electronic Resource
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  • 4
    Publication Date: 2016-02-23
    Description: Author(s): Zhengxiang Li, J. E. Gonzalez, Hongwei Yu, Zong-Hong Zhu, and J. S. Alcaniz We apply two methods, i.e., the Gaussian processes and the nonparametric smoothing procedure, to reconstruct the Hubble parameter H ( z ) as a function of redshift from 15 measurements of the expansion rate obtained from age estimates of passively evolving galaxies. These reconstructions enable us to d… [Phys. Rev. D 93, 043014] Published Mon Feb 22, 2016
    Keywords: Astrophysics
    Print ISSN: 0556-2821
    Electronic ISSN: 1089-4918
    Topics: Physics
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  • 5
    Publication Date: 2019-07-13
    Description: On Vesta, the thermal behavior of areas of unusual albedo seen at the local scale can be related to physical properties that can provide information about the origin of those materials. We used Dawn s Visible and Infrared Mapping Spectrometer (VIR) hyperspectral cubes to retrieve surface temperatures and emissivities, with high accuracy as long as temperatures are greater than ~180 K. Data acquired in the Survey phase (23 July through 29 August 2011) show several unusual surface features: 1) high-albedo (bright) and low-albedo (dark) material deposits, 2) spectrally distinct ejecta and pitted materials, 3) regions suggesting finer-grained materials. Some of the unusual dark and bright features were reobserved by VIR in the subsequent High-Altitude Mapping Orbit (HAMO) and Low- Altitude Mapping Orbit (LAMO) phases at increased pixel resolution. In this work we present temperature maps and emissivities of several local-scale features that were observed by Dawn under different illumination conditions and different local solar times. Data from VIR's IR channel show that bright regions generally correspond to regions with lower thermal emission, i.e. lower temperature, while dark regions correspond to areas with higher thermal emission, i.e. higher temperature. This behavior confirms that many of the dark appearances in the VIS mainly reflect albedo variations, and not, for example, shadowing. During maximum daily insolation, dark features in the equatorial region may rise to temperatures greater than 270 K, while brightest features stop at roughly 258 K, local solar time being similar. However, pitted materials, showing relatively low reflectance, have significantly lower temperatures, as a result of differences in composition and/or structure (e.g, average grain size of the surface regolith, porosity, etc.). To complement this work, we provide preliminary values of thermal inertia for some bright and dark features.
    Keywords: Astrophysics
    Type: JSC-CN-27019 , 44th Annual Meeting AAS; Oct 14, 2012 - Oct 19, 2012; Reno, NV; United States
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  • 6
    Publication Date: 2019-07-19
    Description: Small bodies record the chemical, physical, and dynamical processes that gave birth to and shaped the solar system. The great variety of small bodies reflects the diversity of both their genesis and their histories. The DARe mission conducts a critical test of how small body populations reflect a history of planetary migration and planetesimal scattering. This understanding is crucial for planning future NASA missions and placing current and past missions into context.
    Keywords: Astrophysics
    Type: JSC-CN-32762 , Lunar and Planetary Science Conference; Mar 16, 2015 - Mar 20, 2015; The Woodlands, TX; United States
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  • 7
    Publication Date: 2019-07-13
    Description: At 525 km in mean diameter, Vesta is the second-most massive object in the main asteroid belt of our Solar System. At all scales, pyroxene absorptions are the most prominent spectral features on Vesta and overall, Vesta mineralogy indicates a complex magmatic evolution that led to a differentiated crust and mantle [1]. The thermal behavior of areas of unusual albedo seen on the surface at the local scale can be related to physical properties that can provide information about the origin of those materials. Dawn's Visible and Infrared Mapping Spectrometer (VIR) [2] hyperspectral images are routinely used, by means of temperature-retrieval algorithms, to compute surface temperatures along with spectral emissivities. Here we present temperature maps of several local-scale features of Vesta that were observed by Dawn under different illumination conditions and different local solar times.
    Keywords: Astrophysics
    Type: JSC-CN-28873 , WHISPERS 2013: Annual Workshop on Hyperspectral Image and Signal Processing; Jun 25, 2013 - Jun 28, 2013; Gainesville, FL; United States
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  • 8
    Publication Date: 2019-08-14
    Description: The Kepler Data Characteristics Handbook (KDCH) provides a description of all phenomena identified in the Kepler data throughout the mission, and an explanation for how these characteristics are handled by the final version of the Kepler Data Processing Pipeline (SOC 9.3).The KDCH complements the Kepler Data Release Notes (KDRNs), which document phenomena and processing unique to a data release. The original motivation for this separation into static, explanatory text and a more journalistic set of figures and tables in the KDRN was for the user to become familiar with the Data Characteristics Handbook, then peruse the short Notes for a new quarter, referring back to the Handbook when necessary. With the completion of the Kepler mission and the final Data Release 25, both the KDCH and the DRN encompass the entire Kepler mission, so the distinction between them is in the level of exposition, not the extent of the time interval discussed.
    Keywords: Astrophysics
    Type: KSCI-19040-005 , ARC-E-DAA-TN46083
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  • 9
    Publication Date: 2019-12-13
    Description: We use joint observations by the Swift X-ray Telescope (XRT) and the Fermi Large Area Telescope (LAT) of gamma-ray burst (GRB) afterglows to investigate the nature of the long-lived high-energy emission observed by Fermi LAT. Joint broadband spectral modeling of XRT and LAT data reveals that LAT nondetections of bright X-ray afterglows are consistent with a cooling break in the inferred electron synchrotron spectrum below the LAT and/or XRT energy ranges. Such a break is sufficient to suppress the high-energy emission so as to be below the LAT detection threshold. By contrast, LAT-detected bursts are best fit by a synchrotron spectrum with a cooling break that lies either between or above the XRT and LAT energy ranges. We speculate that the primary difference between GRBs with LAT afterglow detections and the nondetected population may be in the type of circumstellar environment in which these bursts occur, with late-time LAT detections preferentially selecting GRBs that occur in low wind-like circumburst density profiles. Furthermore, we find no evidence of high-energy emission in the LAT-detected population significantly in excess of the flux expected from the electron synchrotron spectrum fit to the observed X-ray emission. The lack of excess emission at high energies could be due to a shocked external medium in which the energy density in the magnetic field is stronger than or comparable to that of the relativistic electrons behind the shock, precluding the production of a dominant synchrotron self-Compton (SSC) component in the LAT energy range. Alternatively, the peak of the SSC emission could be beyond the 0.1100 GeV energy range considered for this analysis.
    Keywords: Astrophysics
    Type: MSFC-E-DAA-TN59161 , Astrophysical Journal (ISSN 0004-637X) (e-ISSN 1538-4357); 863; 2; 138
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