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  • ATLAS; A Trans-Atlantic assessment and deep-water ecosystem-based spatial management plan for Europe; Climate change; cold-water corals; Deep-sea; File format; File name; File size; fisheries; fishes; habitat suitability modelling; octocorals; scleractinians; species distribution models; Uniform resource locator/link to file; vulnerable marine ecosystems  (1)
  • Atlantic; Azores; Azores_reef; BIO; Biology; cold-water corals; Deep sea; ecoscape; environmental filtering; foundation species; habitat suitability; Image; Image (File Size); Image (Media Type); Species; vulnerable marine ecosystems  (1)
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  • 1
    Publication Date: 2024-03-11
    Description: We used environmental niche modelling along with the best available species occurrence data and environmental parameters to model habitat suitability for key cold-water coral and commercially important deep-sea fish species under present-day (1951-2000) environmental conditions and to forecast changes under severe, high emissions future (2081-2100) climate projections (RCP8.5 scenario) for the North Atlantic Ocean (from 18°N to 76°N and 36°E to 98°W). The VME indicator taxa included Lophelia pertusa , Madrepora oculata, Desmophyllum dianthus, Acanela arbuscula, Acanthogorgia armata, and Paragorgia arborea. The six deep-sea fish species selected were: Coryphaenoides rupestris, Gadus morhua, blackbelly Helicolenus dactylopterus, Hippoglossoides platessoides, Reinhardtius hippoglossoides, and Sebastes mentella. We used an ensemble modelling approach employing three widely-used modelling methods: the Maxent maximum entropy model, Generalized Additive Models, and Random Forest. This dataset contains: 1) Predicted habitat suitability index under present-day (1951-2000) and future (2081-2100; RCP8.5) environmental conditions for twelve deep-sea species in the North Atlantic Ocean, using an ensemble modelling approach.  2) Climate-induced changes in the suitable habitat of twelve deep-sea species in the North Atlantic Ocean, as determined by binary maps built with an ensemble modelling approach and the 10-percentile training presence logistic (10th percentile) threshold. 3) Forecasted present-day suitable habitat loss (value=-1), gain (value=1), and acting as climate refugia (value=2) areas under future (2081-2100; RCP8.5) environmental conditions for twelve deep-sea species in the North Atlantic Ocean. Areas were identified from binary maps built with an ensemble modelling approach and two thresholds: 10-percentile training presence logistic threshold (10th percentile) and maximum sensitivity and specificity (MSS). Refugia areas are those areas predicted as suitable both under present-day and future conditions. All predictions were projected with the Albers equal-area conical projection centred in the middle of the study area. The grid cell resolution is of 3x3 km.
    Keywords: ATLAS; A Trans-Atlantic assessment and deep-water ecosystem-based spatial management plan for Europe; Climate change; cold-water corals; Deep-sea; File format; File name; File size; fisheries; fishes; habitat suitability modelling; octocorals; scleractinians; species distribution models; Uniform resource locator/link to file; vulnerable marine ecosystems
    Type: Dataset
    Format: text/tab-separated-values, 384 data points
    Location Call Number Expected Availability
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  • 2
    Publication Date: 2024-04-20
    Description: We developed habitat suitability models for 14 vulnerable and foundation CWC taxa of the Azores employing an original combination of traditional and novel modelling techniques. We introduced the term ecoscape to identify a sensu stricto environmental filter that delimits the potential distribution of coexisting species. --- The published data include: 1. GAM and Maxent habitat suitability predictions classified as high (3), medium (2) or low (1) confidence. Confidence in habitat suitability prediction was estimated with a bootstrap process and depended on the frequency individual raster cells were classified as suitable based on sensitivity‐specificity sum maximization thresholds. Based on this process habitat suitability predictions were categorized as low [1-50%), medium [50-90%) or high [90-100%] confidence. 2. Combined Suitability Maps. GAM and Maxent predictions were combined and each raster cell predicted as suitable was classified based on local fuzzy matching and bootstrap frequencies as follow: value of 1.0 in .tif files: high confidence suitable cells, raster cells predicted as suitable with high confidence by GAM or Maxent, or both and with a local fuzzy similarity greater than 0.5; value of 0.5 in .tif files: medium confidence suitable cells, raster cells predicted as suitable with medium confidence by both GAM and Maxent OR raster cells predicted as suitable with high confidence by GAM or Maxent and with a local fuzzy similarity not equal to zero; value of 0.0 in .tif files: low confidence suitable cell, any other cell predicted as suitable by GAM or Maxent, or both. 3. Overlapping habitat suitability predictions. The .tif file shows the number of taxa predicted as suitable for each raster cell. 4. Regional ecoscapes. Ecoscapes were classified as shallow areas (1), upper slopes (2) and lower slopes (3). 5. Environmetal clusters used to define regional ecoscapes. Clusters were derived using the X-means algorithm.
    Keywords: Atlantic; Azores; Azores_reef; BIO; Biology; cold-water corals; Deep sea; ecoscape; environmental filtering; foundation species; habitat suitability; Image; Image (File Size); Image (Media Type); Species; vulnerable marine ecosystems
    Type: Dataset
    Format: text/tab-separated-values, 89 data points
    Location Call Number Expected Availability
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