ALBERT

Description: Many biological seep studies focused on the distribution, structure, nutrition and food web architecture of seep communities as well as on their interaction with the seep geochemistry. However, overall respiration at cold seeps received only little attention. We conducted in-situ oxygen flux measurements in combination with ex-situ oxygen micro-profiles, respiration measurements, as well as rate determinations of microbial methane and sulfate turnover to assess respiration pathways as well as carbon turnover at a seep habitat that was recently discovered alongside the Hikurangi Margin offshore northern New Zealand. This habitat is dominated by dense beds of tube-building, heterotrophic ampharetid polychaetes. Average total oxygen uptake (TOU) from this habitat was very high (83.7 mmol m− 2 day− 1). TOU at a non-seep reference site ranged between 2.7 and 5.8 mmol m− 2 day− 1. About 37% (30.8 mmol m− 2 day− 1) of the average TOU was consumed by ampharetids. Considering mean diffusive oxygen uptake (8.5 mmol m− 2 day− 1) the remaining fraction of ~ 53% of the TOU (44.4 mmol m− 2 day− 1) might be explained by respiration of epibenthic organisms as well as aerobic methane and sulfide oxidation at the sediment–water interface. The strongly negative carbon isotopic signatures (− 52.9 ± 5‰ VPDB) of the ampharetid tissues indicate a methane derived diet. However, carbon production via anaerobic oxidation of methane (AOM) was too low (0.1 mmol C m− 2 day− 1) to cover the mean carbon demand of the ampharetid communities (21 mmol C m− 2 day− 1). Likely, organic carbon generated via aerobic methane oxidation represents their major carbon source. This is in contrast to other seep habitats, where energy bound in methane is partly transferred to sulfide via AOM and finally consumed by sulfide-oxidizing chemoautotrophs providing carbon that subsequently enters the benthic food web.

Description: This study combines sediment geochemical analysis, in situ benthic lander deployments and numerical modeling to quantify the biogeochemical cycles of carbon and sulfur and the associated rates of Gibbs energy production at a novel methane seep. The benthic ecosystem is dominated by a dense population of tube-building ampharetid polychaetes and conspicuous microbial mats were unusually absent. A 1D numerical reaction-transport model, which allows for the explicit growth of sulfide and methane oxidizing microorganisms, was tuned to the geochemical data using a fluid advection velocity of 14 cm yr−1. The fluids provide a deep source of dissolved hydrogen sulfide and methane to the sediment with fluxes equal to 4.1 and 18.2 mmol m−2 d−1, respectively. Chemosynthetic biomass production in the subsurface sediment is estimated to be 2.8 mmol m−2 d−1 of C biomass. However, carbon and oxygen budgets indicate that chemosynthetic organisms living directly above or on the surface sediment have the potential to produce 12.3 mmol m−2 d−1 of C biomass. This autochthonous carbon source meets the ampharetid respiratory carbon demand of 23.2 mmol m−2 d−1 to within a factor of 2. By contrast, the contribution of photosynthetically-fixed carbon sources to ampharetid nutrition is minor (3.3 mmol m−2 d−1 of C). The data strongly suggest that mixing of labile autochthonous microbial detritus below the oxic layer sustains high measured rates of sulfate reduction in the uppermost 2 cm of the sulfidic sediment (100–200 nmol cm−3 d−1). Similar rates have been reported in the literature for other seeps, from which we conclude that autochthonous organic matter is an important substrate for sulfate reducing bacteria in these sediment layers. A system-scale energy budget based on the chemosynthetic reaction pathways reveals that up to 8.3 kJ m−2 d−1 or 96 mW m−2 of catabolic (Gibbs) energy is dissipated at the seep through oxidation reactions. The microorganisms mediating sulfide oxidation and anaerobic oxidation of methane (AOM) produce 95% and 2% of this energy flux, respectively. The low power output by AOM is due to strong bioenergetic constraints imposed on the reaction rate by the composition of the chemical environment. These constraints provide a high potential for dissolved methane efflux from the sediment (12.0 mmol m−2 d−1) and indicates a much lower efficiency of (dissolved) methane sequestration by AOM at seeps than considered previously. Nonetheless, AOM is able to consume a third of the ascending methane flux (5.9 mmol m−2 d−1 of CH4) with a high efficiency of energy expenditure (35 mmol CH4 kJ−1). It is further proposed that bioenergetic limitation of AOM provides an explanation for the non-zero sulfate concentrations below the AOM zone observed here and in other active and passive margin sediments.

Description: Current de-oxygenation of the oceans is associated with severe habitat loss and distinct changes in the species composition of bentho-pelagic communities. We investigated the distributions of epibenthic megafauna across the Peruvian OMZ (11°S) at water depths ranging from ∼80 to 1000 m water depth using sea floor images. Likely controls of distributions were adressed by combining the abundances of major groups with geochemical parameters and sea-floor topography. In addition to bottom-water oxygen levels and organic-carbon availability, particular emphasis is laid on the effects of local hydrodynamics. Beside the occurrence of microbial mats at the shelf and upper slope, distinct zones of highly abundant megafauna, dominated by gastropods (900 ind. m−2), ophiuroids (140 ind. m−2), and pennatulaceans (20 ind. m−2), were observed at the lower boundary of the OMZ. Their distribution extended from 460 m water depth (O2 levels 〈 2 μM), where gastropods were abundant, to 680 m (O2 ∼6 μM) where epifaunal abundances declined sharply. Bottom water O2 represents a major factor that limits the ability of metazoans to invade deeply into the OMZ where they could have access to labile organic carbon. However, depending on their feeding mode, the distribution of organisms appeared to be related to local hydrodynamics caused by the energy dissipation of incipient internal M2 tides affecting the suspension, transport and deposition of food particles. This was particularly evident in certain sections of the investigated transect. At these potentially critical sites, energy dissipation of internal tides is associated with high bottom shear stress and high turbulences and coincides with elevated turbidity levels in the benthic boundary layer, increased Zr/Al-ratios, low sedimentation rates as well as a shift in the grain size towards coarser particles. In or near such areas, abundant suspension-feeding organisms, such as ophiuroids, pennatulaceans, and tunicates were present, whereas deposit-feeding gastropods were absent. The influence of local hydrodynamic conditions on the distribution of epibenthic organisms has been neglected in OMZ studies, although it has been considered in other settings.

Description: This study investigates the biogeochemical processes that control the benthic fluxes of dissolved nitrogen (N) species in Boknis Eck - a 28 m deep site in the Eckernförde Bay (southwestern Baltic Sea). Bottom water oxygen concentrations (O2-BW) fluctuate greatly over the year at Boknis Eck, being well-oxygenated in winter and experiencing severe bottom water hypoxia and even anoxia in late summer. The present communication addresses the winter situation (February 2010). Fluxes of ammonium (NH4+), nitrate (NO3-) and nitrite (NO2-) were simulated using a benthic model that accounted for transport andbiogeochemical reactions and constrained with ex situ flux measurements and sediment geochemical analysis. The sediments were a net sink for NO3- (-0.35 mmol m-2 d-1 of NO3-), of which 75% was ascribed to dissimilatory reduction of nitrate to ammonium (DNRA) by sulfide oxidizing bacteria, and 25% to NO3- reduction to NO2- by denitrifying microorganisms. NH4+ fluxes were high (1.74 mmol m-2d-1 of NH4+), mainly due to the degradation of organic nitrogen, and directed out of the sediment. NO2-fluxes were negligible. The sediments in Boknis Eck are, therefore, a net source of dissolved inorganic nitrogen(DIN = NO3- + NO2- + NH4+) during winter. This is in large part due to bioirrigation, which accounts for 76% of the benthic efflux of NH4+, thus reducing the capacity for nitrification of NH4+. The combined rate of fixed N loss by denitrification and anammox was estimated at 0.08 mmol m-2 d-1 of N2, which is at the lower end of previously reported values. A systematic sensitivity analysis revealed that denitrification and anammox respond strongly and positively to the concentration of NO3- in the bottomwater (NO3-BW).Higher O2-BW decreases DNRA and denitrification but stimulates both anammox and the contribution ofanammox to total N2 production (%Ramx). A complete mechanistic explanation of these findings is provided. Our analysis indicates that nitrification is the geochemical driving force behind the observed correlation between %Ramx and water depth in the seminal study of Dalsgaard et al. (2005). Despite remaining uncertainties, the results provide a general mechanistic framework for interpreting the existing knowledge of N-turnover processes and fluxes in continental margin sediments, as well as predicting the types of environment where these reactions are expected to occur prominently.

Description: Benthic nitrogen (N) cycling was investigated at six stations along a transect traversing the Peruvian oxygen minimum zone (OMZ) at 11 °S. An extensive dataset including porewater concentration profiles and in situ benthic fluxes of nitrate (NO3–), nitrite (NO2–) and ammonium (NH4+) was used to constrain a 1–D reaction–transport model designed to simulate and interpret the measured data at each station. Simulated rates of nitrification, denitrification, anammox and dissimilatory nitrate reduction to ammonium (DNRA) by filamentous large sulfur bacteria (e.g. Beggiatoa and Thioploca) were highly variable throughout the OMZ yet clear trends were discernible. On the shelf and upper slope (80 – 260 m water depth) where extensive areas of bacterial mats were present, DNRA dominated total N turnover (less-than-or-equals, slant 2.9 mmol N m–2 d–1) and accounted for greater-or-equal, slanted 65 % of NO3– + NO2– uptake by the sediments from the bottom water. Nonetheless, these sediments did not represent a major sink for dissolved inorganic nitrogen (DIN = NO3– + NO2– + NH4+) since DNRA reduces NO3– and, potentially NO2–, to NH4+. Consequently, the shelf and upper slope sediments were recycling sites for DIN due to relatively low rates of denitrification and high rates of ammonium release from DNRA and ammonification of organic matter. This finding contrasts with the current opinion that sediments underlying OMZs are a strong sink for DIN. Only at greater water depths (300 – 1000 m) did the sediments become a net sink for DIN. Here, denitrification was the major process (less-than-or-equals, slant 2 mmol N m–2 d–1) and removed 55 – 73 % of NO3– and NO2– taken up by the sediments, with DNRA and anammox accounting for the remaining fraction. Anammox was of minor importance on the shelf and upper slope yet contributed up to 62 % to total N2 production at the 1000 m station. The results indicate that the partitioning of oxidized N (NO3–, NO2–) into DNRA or denitrification is a key factor determining the role of marine sediments as DIN sinks or recycling sites. Consequently, high measured benthic uptake rates of oxidized N within OMZs do not necessarily indicate a loss of fixed N from the marine environment.

Description: In situ methane emission measurements from sediments are combined with water column backscatter anomalies recorded with an Acoustic Doppler Current Profiler (ADCP) integrated on a benthic observatory. During cruise SO191 to the Hikurangi Margin (New Zealand), the Fluid Flux Observatory (FLUFO) was deployed at a cold seep site at Omakere Ridge. The sediments incubated in the two benthic chambers of FLUFO contained seep-associated fauna, including small and larger tubeworms, juvenile bivalves of the genus Acharax and some juvenile clams. The first 26 h of in situ incubation revealed low to moderate methane fluxes of 0.01 to 0.4 mmol m− 2 d− 1 into the overlying water of the backup and flux chamber, respectively. In the following sampling sequence, however, the methane concentration in the flux chamber reached 3-fold higher concentrations whereas the methane concentration in the backup chamber remained low and unchanged. Simultaneous to the sudden methane increase, a significant backscatter anomaly was recorded and persisted for 30 min and covered the entire depth range (100 m) of the upward looking ADCP. Data analyses revealed that a single-phase plume (no bubbles) outburst likely occurred during this time. While bubbles appeared to be present during some periods, plume simulations revealed that the volume of gas required (rate of 8 ton/day) does not support a bubble plume. A second data set was obtained during lander deployments at Rock Garden where visual observations by ROV confirmed the transient pattern of free gas injection into the water column. Acoustic flares and methane concentration increase in the bottom water hint towards a pressure (tidal) induced discharge mechanism. The presented data demonstrate the temporal and spatial variability of seabed methane emission, and very short methane signal lifetime in the water column (hours to a few days) due to turbulent diffusion. Both have to be considered when methane budgets are extrapolated from single methane emission rates.

Description: We present sedimentary geochemical data and in situ benthic flux measurements of dissolved inorganic nitrogen (DIN: NO3−, NO2−, NH4+) and oxygen (O2) from 7 sites with variable sand content along 18°N offshore Mauritania (NW Africa). Bottom water O2 concentrations at the shallowest station were hypoxic (42 μM) and increased to 125 μM at the deepest site (1113 m). Total oxygen uptake rates were highest on the shelf (−10.3 mmol O2 m−2 d−1) and decreased quasi-exponentially with water depth to −3.2 mmol O2 m−2 d−1. Average denitrification rates estimated from a flux balance decreased with water depth from 2.2 to 0.2 mmol N m−2 d−1. Overall, the sediments acted as net sink for DIN. Observed increases in δ15NNO3 and δ18ONO3 in the benthic chamber deployed on the shelf, characterized by muddy sand, were used to calculate apparent benthic nitrate fractionation factors of 8.0‰ (15εapp) and 14.1‰ (18εapp). Measurements of δ15NNO2 further demonstrated that the sediments acted as a source of 15N depleted NO2−. These observations were analyzed using an isotope box model that considered denitrification and nitrification of NH4+ and NO2−. The principal findings were that (i) net benthic 14N/15N fractionation (εDEN) was 12.9 ± 1.7‰, (ii) inverse fractionation during nitrite oxidation leads to an efflux of isotopically light NO2− (−22 ± 1.9‰), and (iii) direct coupling between nitrification and denitrification in the sediment is negligible. Previously reported εDEN for fine-grained sediments are much lower (4–8‰). We speculate that high benthic nitrate fractionation is driven by a combination of enhanced porewater–seawater exchange in permeable sediments and the hypoxic, high productivity environment. Although not without uncertainties, the results presented could have important implications for understanding the current state of the marine N cycle.

Description: A meaningful application of Mo as a paleo-redox proxy requires an understanding of Mo cycling in modern reducing environments. Stagnant euxinic basins such as the Black Sea are generally regarded as model systems for understanding euxinic systems during early Earth history. However, drawing direct parallels between the Black Sea and open-marine euxinic margins is somewhat complicated by differences in the seawater residence time between these two environments. We report sediment and pore water Mo, U, Mn and Fe data for a euxinic basin with a short seawater residence time; the weakly restricted Gotland Deep in the Baltic Sea. Here, prolonged periods of euxinia alternate with brief inflow events during which well-oxygenated, saline water penetrates into the basin. During these inflow events, dissolved Mn and Fe that has accumulated within the euxinic deep water can be oxidized and precipitated. Co-variations of Mo and U within the sediment suggest that these inflow and oxygenation events may favor Mo accumulation in the sediment through adsorption to freshly oxidized Mn and Fe solid phases. Once Mo is sequestered within the deeper euxinic water and sediments, Mo retention can be further facilitated by conversion to thiomolybdate species and interactions with organic matter and metal sulfides. By comparing our data with those from previous studies where a Mn and Fe “shuttle” for Mo has been demonstrated, we identify two prerequisites for the occurrence of this mechanism. First, there must be a water column oxic–anoxic redox-boundary; this provides a solubility contrast for Mn and Fe. Second, the residence time of seawater in the system has to be short (weeks to a few years). The latter criterion can be met through regular inflow in weakly restricted basins or upwelling in oxygen minimum zones at open-marine continental margins. Based on prior work, we suggest that similar conditions to those currently represented by the Gotland Deep may have prevailed at euxinic ocean margins during the Proterozoic. A boundary between euxinic and oxic water masses overlying the continental shelf may have resulted in accelerated Mo transport through the water column with Mn and Fe (oxyhydr)oxides. We propose that this mechanism, along with Mo isotope fractionation during adsorption, could contribute to the light Mo isotope composition observed in open-marine euxinic sediment facies of the Proterozoic.